RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 UNQ6494/PRO21346Q6UXR6 183 aa17.32■□□□□ 0.36
SMG5-204ENST00000476954 RALYLQ86SE5 291 aaKnown RBP17.32■□□□□ 0.36
SMG5-204ENST00000476954 DDX1Q92499 740 aaKnown RBP17.32■□□□□ 0.36
SMG5-204ENST00000476954 MAP4K1Q92918 833 aa17.32■□□□□ 0.36
SMG5-204ENST00000476954 NELL2Q99435 816 aa17.32■□□□□ 0.36
SMG5-204ENST00000476954 PLA2G2FQ9BZM2 168 aa17.32■□□□□ 0.36
SMG5-204ENST00000476954 NDRG2Q9UN36 371 aaKnown RBP17.32■□□□□ 0.36
SMG5-204ENST00000476954 SSX2IPQ9Y2D8 614 aa17.32■□□□□ 0.36
SMG5-204ENST00000476954 NCAM2O15394 837 aa17.31■□□□□ 0.36
SMG5-204ENST00000476954 OATP04181 439 aa17.31■□□□□ 0.36
SMG5-204ENST00000476954 PSAPP07602 524 aa17.31■□□□□ 0.36
SMG5-204ENST00000476954 SREBF1P36956 1147 aa17.31■□□□□ 0.36
SMG5-204ENST00000476954 ADCY1Q08828 1119 aa17.31■□□□□ 0.36
SMG5-204ENST00000476954 SF3A2Q15428 464 aaKnown RBP17.31■□□□□ 0.36
SMG5-204ENST00000476954 UGCGQ16739 394 aa17.31■□□□□ 0.36
SMG5-204ENST00000476954 MTSS1LQ765P7 747 aa17.31■□□□□ 0.36
SMG5-204ENST00000476954 COLGALT2Q8IYK4 626 aa17.31■□□□□ 0.36
SMG5-204ENST00000476954 ZNF687Q8N1G0 1237 aa17.31■□□□□ 0.36
SMG5-204ENST00000476954 ZNF710Q8N1W2 664 aa17.31■□□□□ 0.36
SMG5-204ENST00000476954 RSAD1Q9HA92 442 aa17.31■□□□□ 0.36
SMG5-204ENST00000476954 PCDHA10Q9Y5I2 948 aa17.31■□□□□ 0.36
SMG5-204ENST00000476954 TDRD15B5MCY1 1934 aaKnown RBP17.31■□□□□ 0.36
SMG5-204ENST00000476954 DSPP15924 2871 aaKnown RBP17.3■□□□□ 0.36
SMG5-204ENST00000476954 CHURC1-FNTBB4DL54 471 aa17.3■□□□□ 0.36
SMG5-204ENST00000476954 SFPQP23246 707 aaKnown RBP eCLIP17.3■□□□□ 0.36
SMG5-204ENST00000476954 FNTBP49356 437 aa17.3■□□□□ 0.36
SMG5-204ENST00000476954 RAB27AP51159 221 aa17.3■□□□□ 0.36
SMG5-204ENST00000476954 PRKCEQ02156 737 aa17.3■□□□□ 0.36
SMG5-204ENST00000476954 PTH1RQ03431 593 aa17.3■□□□□ 0.36
SMG5-204ENST00000476954 CCDC6Q16204 474 aa17.3■□□□□ 0.36
SMG5-204ENST00000476954 ZNF746Q6NUN9 644 aaPredicted RBP17.3■□□□□ 0.36
SMG5-204ENST00000476954 ZNF852Q6ZMS4 543 aa17.3■□□□□ 0.36
SMG5-204ENST00000476954 NIPA1Q7RTP0 329 aa17.3■□□□□ 0.36
SMG5-204ENST00000476954 CATSPER4Q7RTX7 472 aa17.3■□□□□ 0.36
SMG5-204ENST00000476954 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.3■□□□□ 0.36
SMG5-204ENST00000476954 KSR1Q8IVT5 923 aa17.3■□□□□ 0.36
SMG5-204ENST00000476954 MB21D2Q8IYB1 491 aaPredicted RBP17.3■□□□□ 0.36
SMG5-204ENST00000476954 NCOA7Q8NI08 942 aa17.3■□□□□ 0.36
SMG5-204ENST00000476954 PGBD4Q96DM1 585 aa17.3■□□□□ 0.36
SMG5-204ENST00000476954 FAM167AQ96KS9 214 aa17.3■□□□□ 0.36
SMG5-204ENST00000476954 SH2D3AQ9BRG2 576 aa17.3■□□□□ 0.36
SMG5-204ENST00000476954 ZNF577Q9BSK1 485 aa17.3■□□□□ 0.36
SMG5-204ENST00000476954 CHRDQ9H2X0 955 aa17.3■□□□□ 0.36
SMG5-204ENST00000476954 RIC8AQ9NPQ8 531 aa17.3■□□□□ 0.36
SMG5-204ENST00000476954 CHST7Q9NS84 486 aa17.3■□□□□ 0.36
SMG5-204ENST00000476954 TMEM150BA6NC51 233 aa17.29■□□□□ 0.36
SMG5-204ENST00000476954 SOBPA7XYQ1 873 aa17.29■□□□□ 0.36
SMG5-204ENST00000476954 HOXC13P31276 330 aa17.29■□□□□ 0.36
SMG5-204ENST00000476954 GNAQP50148 359 aa17.29■□□□□ 0.36
SMG5-204ENST00000476954 NRLP54845 237 aa17.29■□□□□ 0.36
SMG5-204ENST00000476954 SATB1Q01826 763 aa17.29■□□□□ 0.36
SMG5-204ENST00000476954 UBXN11Q5T124 520 aa17.29■□□□□ 0.36
SMG5-204ENST00000476954 POTEHQ6S545 545 aa17.29■□□□□ 0.36
SMG5-204ENST00000476954 MRPL10Q7Z7H8 261 aaKnown RBP17.29■□□□□ 0.36
SMG5-204ENST00000476954 ING5Q8WYH8 240 aa17.29■□□□□ 0.36
SMG5-204ENST00000476954 GPR62Q9BZJ7 368 aa17.29■□□□□ 0.36
SMG5-204ENST00000476954 SAMM50Q9Y512 469 aa17.29■□□□□ 0.36
SMG5-204ENST00000476954 COL4A2P08572 1712 aa17.28■□□□□ 0.36
SMG5-204ENST00000476954 CCL16O15467 120 aa17.28■□□□□ 0.36
SMG5-204ENST00000476954 FOSP01100 380 aaPredicted RBP17.28■□□□□ 0.36
SMG5-204ENST00000476954 SPINK2P20155 84 aa17.28■□□□□ 0.36
SMG5-204ENST00000476954 NAPAP54920 295 aa17.28■□□□□ 0.36
SMG5-204ENST00000476954 AASDHQ4L235 1098 aaPredicted RBP17.28■□□□□ 0.36
SMG5-204ENST00000476954 PRSS55Q6UWB4 352 aaPredicted RBP17.28■□□□□ 0.36
SMG5-204ENST00000476954 PLEKHM2Q8IWE5 1019 aa17.28■□□□□ 0.36
SMG5-204ENST00000476954 NPAS3Q8IXF0 933 aa17.28■□□□□ 0.36
SMG5-204ENST00000476954 RABGGTAQ92696 567 aa17.28■□□□□ 0.36
SMG5-204ENST00000476954 MBOAT7Q96N66 472 aa17.28■□□□□ 0.36
SMG5-204ENST00000476954 NRBP2Q9NSY0 501 aa17.28■□□□□ 0.36
SMG5-204ENST00000476954 HCFC1R1Q9NWW0 138 aa17.28■□□□□ 0.36
SMG5-204ENST00000476954 MIOSQ9NXC5 875 aa17.28■□□□□ 0.36
SMG5-204ENST00000476954 POLIQ9UNA4 740 aa17.28■□□□□ 0.36
SMG5-204ENST00000476954 U3KPZ7 1027 aaPredicted RBP17.28■□□□□ 0.36
SMG5-204ENST00000476954 TICRRQ7Z2Z1 1910 aa17.27■□□□□ 0.36
SMG5-204ENST00000476954 HIP1O00291 1037 aa17.27■□□□□ 0.36
SMG5-204ENST00000476954 ADAMTS3O15072 1205 aa17.27■□□□□ 0.36
SMG5-204ENST00000476954 KCNK5O95279 499 aa17.27■□□□□ 0.36
SMG5-204ENST00000476954 ZIC2O95409 532 aaPredicted RBP17.27■□□□□ 0.36
SMG5-204ENST00000476954 ADCY7P51828 1080 aa17.27■□□□□ 0.36
SMG5-204ENST00000476954 TARBP2Q15633 366 aaKnown RBP17.27■□□□□ 0.36
SMG5-204ENST00000476954 JAKMIP3Q5VZ66 844 aa17.27■□□□□ 0.36
SMG5-204ENST00000476954 LRSAM1Q6UWE0 723 aa17.27■□□□□ 0.36
SMG5-204ENST00000476954 TMTC3Q6ZXV5 915 aa17.27■□□□□ 0.36
SMG5-204ENST00000476954 SMAP1Q8IYB5 467 aaPredicted RBP17.27■□□□□ 0.36
SMG5-204ENST00000476954 FAM160A2Q8N612 972 aaPredicted RBP17.27■□□□□ 0.36
SMG5-204ENST00000476954 KDF1Q8NAX2 398 aaPredicted RBP17.27■□□□□ 0.36
SMG5-204ENST00000476954 TMEM121BQ9BXQ6 578 aaPredicted RBP17.27■□□□□ 0.36
SMG5-204ENST00000476954 TBC1D22BQ9NU19 505 aa17.27■□□□□ 0.36
SMG5-204ENST00000476954 KANSL3Q9P2N6 904 aa17.27■□□□□ 0.36
SMG5-204ENST00000476954 FBXW11Q9UKB1 542 aa17.27■□□□□ 0.36
SMG5-204ENST00000476954 MRPS17Q9Y2R5 130 aaKnown RBP17.27■□□□□ 0.36
SMG5-204ENST00000476954 SPAG17Q6Q759 2223 aa17.27■□□□□ 0.35
SMG5-204ENST00000476954 LIMK1P53667 647 aa17.26■□□□□ 0.35
SMG5-204ENST00000476954 RING1Q06587 406 aa17.26■□□□□ 0.35
SMG5-204ENST00000476954 DSC1Q08554 894 aa17.26■□□□□ 0.35
SMG5-204ENST00000476954 GAS6Q14393 721 aa17.26■□□□□ 0.35
SMG5-204ENST00000476954 MTERF2Q49AM1 385 aa17.26■□□□□ 0.35
SMG5-204ENST00000476954 HEATR6Q6AI08 1181 aaKnown RBP17.26■□□□□ 0.35
SMG5-204ENST00000476954 NFXL1Q6ZNB6 911 aa17.26■□□□□ 0.35
SMG5-204ENST00000476954 RHPN2Q8IUC4 686 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms