RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 ZKSCAN5Q9Y2L8 839 aa31.46■■■□□ 2.63
VEGFA-211ENST00000476772 TRIP12Q14669 1992 aaPredicted RBP31.46■■■□□ 2.63
VEGFA-211ENST00000476772 KRT13P13646 458 aa31.45■■■□□ 2.63
VEGFA-211ENST00000476772 CASP14P31944 242 aa31.45■■■□□ 2.63
VEGFA-211ENST00000476772 NLRP11P59045 1033 aaKnown RBP31.45■■■□□ 2.63
VEGFA-211ENST00000476772 C1QTNF8P60827 252 aa31.45■■■□□ 2.63
VEGFA-211ENST00000476772 SLFN12LQ6IEE8 588 aa31.45■■■□□ 2.63
VEGFA-211ENST00000476772 GPD1LQ8N335 351 aa31.45■■■□□ 2.63
VEGFA-211ENST00000476772 NLRP7Q8WX94 980 aa31.45■■■□□ 2.63
VEGFA-211ENST00000476772 WBP1LQ9NX94 342 aa31.45■■■□□ 2.63
VEGFA-211ENST00000476772 AKR1B15C9JRZ8 316 aaPredicted RBP31.44■■■□□ 2.62
VEGFA-211ENST00000476772 TRIM49P0CI25 452 aa31.44■■■□□ 2.62
VEGFA-211ENST00000476772 TRIM49CP0CI26 452 aa31.44■■■□□ 2.62
VEGFA-211ENST00000476772 FXR1P51114 621 aaKnown RBP eCLIP31.44■■■□□ 2.62
VEGFA-211ENST00000476772 KCNMA1Q12791 1236 aa31.44■■■□□ 2.62
VEGFA-211ENST00000476772 NBPF20Q3BBV1 942 aa31.44■■■□□ 2.62
VEGFA-211ENST00000476772 ACO2Q99798 780 aaKnown RBP31.44■■■□□ 2.62
VEGFA-211ENST00000476772 HMX1Q9NP08 348 aaPredicted RBP31.44■■■□□ 2.62
VEGFA-211ENST00000476772 ACKR2O00590 384 aa31.44■■■□□ 2.62
VEGFA-211ENST00000476772 IQCF3P0C7M6 154 aa31.44■■■□□ 2.62
VEGFA-211ENST00000476772 GNAT1P11488 350 aa31.44■■■□□ 2.62
VEGFA-211ENST00000476772 SCLT1Q96NL6 688 aa31.44■■■□□ 2.62
VEGFA-211ENST00000476772 AGO2Q9UKV8 859 aaKnown RBP31.44■■■□□ 2.62
VEGFA-211ENST00000476772 MFAP3LO75121 409 aa31.43■■■□□ 2.62
VEGFA-211ENST00000476772 TPM1P09493 284 aa31.43■■■□□ 2.62
VEGFA-211ENST00000476772 MATR3P43243 847 aaKnown RBP eCLIP31.43■■■□□ 2.62
VEGFA-211ENST00000476772 VAMP7P51809 220 aa31.43■■■□□ 2.62
VEGFA-211ENST00000476772 TMEM62Q0P6H9 643 aa31.43■■■□□ 2.62
VEGFA-211ENST00000476772 ZNF410Q86VK4 478 aa31.43■■■□□ 2.62
VEGFA-211ENST00000476772 ZSCAN30Q86W11 494 aa31.43■■■□□ 2.62
VEGFA-211ENST00000476772 PLEKHO2Q8TD55 490 aa31.43■■■□□ 2.62
VEGFA-211ENST00000476772 FAM213AQ9BRX8 229 aa31.43■■■□□ 2.62
VEGFA-211ENST00000476772 TTYH3Q9C0H2 523 aa31.43■■■□□ 2.62
VEGFA-211ENST00000476772 PRMT7Q9NVM4 692 aaPredicted RBP31.43■■■□□ 2.62
VEGFA-211ENST00000476772 RNF225M0QZC1 329 aaPredicted RBP31.42■■■□□ 2.62
VEGFA-211ENST00000476772 KIAA0391O15091 583 aaKnown RBP31.42■■■□□ 2.62
VEGFA-211ENST00000476772 B4GALT5O43286 388 aa31.42■■■□□ 2.62
VEGFA-211ENST00000476772 CSDE1O75534 798 aaKnown RBP31.42■■■□□ 2.62
VEGFA-211ENST00000476772 TRIM21P19474 475 aaKnown RBP31.42■■■□□ 2.62
VEGFA-211ENST00000476772 DLG4P78352 724 aa31.42■■■□□ 2.62
VEGFA-211ENST00000476772 CCZ1BP86790 482 aa31.42■■■□□ 2.62
VEGFA-211ENST00000476772 CCZ1P86791 482 aaPredicted RBP31.42■■■□□ 2.62
VEGFA-211ENST00000476772 PRPF4BQ13523 1007 aaKnown RBP31.42■■■□□ 2.62
VEGFA-211ENST00000476772 PCSK9Q8NBP7 692 aaKnown RBP31.42■■■□□ 2.62
VEGFA-211ENST00000476772 DNAJB3Q8WWF6 145 aa31.42■■■□□ 2.62
VEGFA-211ENST00000476772 CRACR2AQ9BSW2 395 aa31.42■■■□□ 2.62
VEGFA-211ENST00000476772 NUP58Q9BVL2 599 aa31.42■■■□□ 2.62
VEGFA-211ENST00000476772 MMRN2Q9H8L6 949 aa31.42■■■□□ 2.62
VEGFA-211ENST00000476772 A0A0B4J269 797 aa31.41■■■□□ 2.62
VEGFA-211ENST00000476772 TTC26A0AVF1 554 aa31.41■■■□□ 2.62
VEGFA-211ENST00000476772 EXTL3O43909 919 aa31.41■■■□□ 2.62
VEGFA-211ENST00000476772 TOM1L1O75674 476 aa31.41■■■□□ 2.62
VEGFA-211ENST00000476772 KIZQ2M2Z5 673 aa31.41■■■□□ 2.62
VEGFA-211ENST00000476772 RNF180Q86T96 592 aa31.41■■■□□ 2.62
VEGFA-211ENST00000476772 SH3TC2Q8TF17 1288 aa31.41■■■□□ 2.62
VEGFA-211ENST00000476772 MSTO1Q9BUK6 570 aa31.41■■■□□ 2.62
VEGFA-211ENST00000476772 GTF2IRD1Q9UHL9 959 aa31.41■■■□□ 2.62
VEGFA-211ENST00000476772 FRMPD3Q5JV73 1810 aa31.41■■■□□ 2.62
VEGFA-211ENST00000476772 FAM187BQ17R55 369 aa31.41■■■□□ 2.62
VEGFA-211ENST00000476772 ADAMTS10Q9H324 1103 aa31.41■■■□□ 2.62
VEGFA-211ENST00000476772 FAM207AQ9NSI2 230 aaPredicted RBP31.41■■■□□ 2.62
VEGFA-211ENST00000476772 CLDN3O15551 220 aa31.4■■■□□ 2.62
VEGFA-211ENST00000476772 GPR32O75388 356 aa31.4■■■□□ 2.62
VEGFA-211ENST00000476772 FMO5P49326 533 aa31.4■■■□□ 2.62
VEGFA-211ENST00000476772 AMHR2Q16671 573 aa31.4■■■□□ 2.62
VEGFA-211ENST00000476772 FIGNQ5HY92 759 aa31.4■■■□□ 2.62
VEGFA-211ENST00000476772 LHX8Q68G74 356 aa31.4■■■□□ 2.62
VEGFA-211ENST00000476772 TSHZ1Q6ZSZ6 1077 aa31.4■■■□□ 2.62
VEGFA-211ENST00000476772 CNGA4Q8IV77 575 aa31.4■■■□□ 2.62
VEGFA-211ENST00000476772 MFSD14AQ96MC6 490 aa31.4■■■□□ 2.62
VEGFA-211ENST00000476772 KIAA1586Q9HCI6 787 aa31.4■■■□□ 2.62
VEGFA-211ENST00000476772 PYCARDQ9ULZ3 195 aa31.4■■■□□ 2.62
VEGFA-211ENST00000476772 ABLIM1O14639 778 aa31.39■■■□□ 2.62
VEGFA-211ENST00000476772 EPHB6O15197 1021 aa31.39■■■□□ 2.62
VEGFA-211ENST00000476772 HARSP12081 509 aaKnown RBP31.39■■■□□ 2.62
VEGFA-211ENST00000476772 CYP24A1Q07973 514 aa31.39■■■□□ 2.62
VEGFA-211ENST00000476772 C1orf220Q5T0J3 134 aa31.39■■■□□ 2.62
VEGFA-211ENST00000476772 ATF7IP2Q5U623 682 aa31.39■■■□□ 2.62
VEGFA-211ENST00000476772 ZBTB33Q86T24 672 aa31.39■■■□□ 2.62
VEGFA-211ENST00000476772 LSM14BQ9BX40 385 aaKnown RBP31.39■■■□□ 2.62
VEGFA-211ENST00000476772 CAPN11Q9UMQ6 739 aa31.39■■■□□ 2.62
VEGFA-211ENST00000476772 PTPN22Q9Y2R2 807 aa31.39■■■□□ 2.62
VEGFA-211ENST00000476772 ZNF233A6NK53 670 aa31.38■■■□□ 2.61
VEGFA-211ENST00000476772 ACOT2P49753 483 aa31.38■■■□□ 2.61
VEGFA-211ENST00000476772 MCCD1P59942 119 aaPredicted RBP31.38■■■□□ 2.61
VEGFA-211ENST00000476772 CDC42EP1Q00587 391 aa31.38■■■□□ 2.61
VEGFA-211ENST00000476772 TMEM132AQ24JP5 1023 aa31.38■■■□□ 2.61
VEGFA-211ENST00000476772 CBWD6Q4V339 395 aa31.38■■■□□ 2.61
VEGFA-211ENST00000476772 FAM47CQ5HY64 1035 aa31.38■■■□□ 2.61
VEGFA-211ENST00000476772 CBWD3Q5JTY5 395 aa31.38■■■□□ 2.61
VEGFA-211ENST00000476772 CBWD5Q5RIA9 395 aa31.38■■■□□ 2.61
VEGFA-211ENST00000476772 GDF6Q6KF10 455 aaPredicted RBP31.38■■■□□ 2.61
VEGFA-211ENST00000476772 SRGAP1Q7Z6B7 1085 aa31.38■■■□□ 2.61
VEGFA-211ENST00000476772 TCHPQ9BT92 498 aa31.38■■■□□ 2.61
VEGFA-211ENST00000476772 GINS2Q9Y248 185 aa31.38■■■□□ 2.61
VEGFA-211ENST00000476772 LDHAP00338 332 aaKnown RBP31.38■■■□□ 2.61
VEGFA-211ENST00000476772 SKILP12757 684 aa31.38■■■□□ 2.61
VEGFA-211ENST00000476772 PROZP22891 400 aa31.38■■■□□ 2.61
VEGFA-211ENST00000476772 ZBTB41Q5SVQ8 909 aa31.38■■■□□ 2.61
VEGFA-211ENST00000476772 CRELD2Q6UXH1 353 aaPredicted RBP31.38■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms