RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 GPRC5DQ9NZD1 345 aa5.36□□□□□ -1.55
CCDC39-204ENST00000476379 PLAGL2Q9UPG8 496 aa5.36□□□□□ -1.55
CCDC39-204ENST00000476379 FNDC3AQ9Y2H6 1198 aaKnown RBP5.36□□□□□ -1.55
CCDC39-204ENST00000476379 MYH8P13535 1937 aa5.36□□□□□ -1.55
CCDC39-204ENST00000476379 SBF2Q86WG5 1849 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 ZNF233A6NK53 670 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 FAM86B1E9PN63 330 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 EML1O00423 815 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 AOC2O75106 756 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 BANF1O75531 89 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 NDUFB10O96000 172 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 FAM86B2P0C5J1 330 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 POLR2MP0CAP2 368 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 GUCY2CP25092 1073 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 NLRP11P59045 1033 aaKnown RBP5.35□□□□□ -1.55
CCDC39-204ENST00000476379 FUT2Q10981 343 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 SLC18A3Q16572 532 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 QPCTQ16769 361 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 BBS9Q3SYG4 887 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 KCNT1Q5JUK3 1230 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 CCDC137Q6PK04 289 aaKnown RBP5.35□□□□□ -1.55
CCDC39-204ENST00000476379 TMEM270Q6UE05 265 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 APTXQ7Z2E3 356 aaKnown RBP5.35□□□□□ -1.55
CCDC39-204ENST00000476379 ANKS1AQ92625 1134 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 ATP6V1G3Q96LB4 118 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 MMTAG2Q9BU76 263 aaKnown RBP5.35□□□□□ -1.55
CCDC39-204ENST00000476379 TRIM7Q9C029 511 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 NEUROG2Q9H2A3 272 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 MAD1L1Q9Y6D9 718 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 CYP11B2P19099 503 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 PSMC2P35998 433 aaKnown RBP5.35□□□□□ -1.55
CCDC39-204ENST00000476379 ARL1P40616 181 aaPredicted RBP5.35□□□□□ -1.55
CCDC39-204ENST00000476379 KCNMA1Q12791 1236 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 HHATQ5VTY9 493 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 CCDC91Q7Z6B0 441 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 ZNF354CQ86Y25 554 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 KAT2BQ92831 832 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 NUP85Q9BW27 656 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 TAF1DQ9H5J8 278 aaPredicted RBP5.35□□□□□ -1.55
CCDC39-204ENST00000476379 METTL14Q9HCE5 456 aaKnown RBP5.35□□□□□ -1.55
CCDC39-204ENST00000476379 SMYD2Q9NRG4 433 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 METTL5Q9NRN9 209 aaKnown RBP5.35□□□□□ -1.55
CCDC39-204ENST00000476379 SEPT10Q9P0V9 454 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 CEP72Q9P209 647 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 CNOT8Q9UFF9 292 aaKnown RBP5.35□□□□□ -1.55
CCDC39-204ENST00000476379 USH1CQ9Y6N9 552 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 MYO5AQ9Y4I1 1855 aaKnown RBP5.35□□□□□ -1.55
CCDC39-204ENST00000476379 hCG_2014768A0A024R1R8 64 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 HIP1RO75146 1068 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 ARP10275 920 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 BCRP11274 1271 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 CREB1P16220 341 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 MSH2P43246 934 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 SNCBQ16143 134 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 ARHGEF16Q5VV41 709 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 MMS22LQ6ZRQ5 1243 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 STXBP4Q6ZWJ1 553 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 ZC3H18Q86VM9 953 aaKnown RBP5.35□□□□□ -1.55
CCDC39-204ENST00000476379 GUF1Q8N442 669 aaKnown RBP5.35□□□□□ -1.55
CCDC39-204ENST00000476379 CCDC197Q8NCU1 140 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 NEDD1Q8NHV4 660 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 NEK9Q8TD19 979 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 TMEM143Q96AN5 459 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 RILPQ96NA2 401 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 DNAJC7Q99615 494 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 GINM1Q9NU53 330 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.35□□□□□ -1.55
CCDC39-204ENST00000476379 NAGPAQ9UK23 515 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 PCDHB4Q9Y5E5 795 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 CHD4Q14839 1912 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 MYH2Q9UKX2 1941 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 MYH13Q9UKX3 1938 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 GMNCA6NCL1 334 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 MAP2K7O14733 419 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 IRF6O14896 467 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 TLR2O60603 784 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 DIAPH2O60879 1101 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 IL1R1P14778 569 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 COMTP21964 271 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 CA4P22748 312 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 MDH1P40925 334 aaKnown RBP5.35□□□□□ -1.55
CCDC39-204ENST00000476379 LIG4P49917 911 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 YWHAGP61981 247 aaKnown RBP eCLIP5.35□□□□□ -1.55
CCDC39-204ENST00000476379 ZNF543Q08ER8 600 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 UBAP2Q5T6F2 1119 aaKnown RBP5.35□□□□□ -1.55
CCDC39-204ENST00000476379 PADI6Q6TGC4 694 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 CBWD2Q8IUF1 395 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 C7orf31Q8N865 590 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 MSANTD4Q8NCY6 345 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 HSPH1Q92598 858 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 TTC17Q96AE7 1141 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 CCDC124Q96CT7 223 aaKnown RBP5.35□□□□□ -1.55
CCDC39-204ENST00000476379 AK8Q96MA6 479 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 UNKQ9C0B0 810 aaKnown RBP5.35□□□□□ -1.55
CCDC39-204ENST00000476379 CCSER1Q9C0I3 900 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 TMEM117Q9H0C3 514 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 LRRC4CQ9HCJ2 640 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 SAYSD1Q9NPB0 183 aa5.35□□□□□ -1.55
CCDC39-204ENST00000476379 TCRBV7S2A1N4TA0A589 114 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 ATP8B1O43520 1251 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms