RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 POMCP01189 267 aa23.37■■□□□ 1.33
LIME1-204ENST00000476183 PRKCBP05771 671 aa23.37■■□□□ 1.33
LIME1-204ENST00000476183 GALTP07902 379 aa23.37■■□□□ 1.33
LIME1-204ENST00000476183 NRIP1P48552 1158 aa23.37■■□□□ 1.33
LIME1-204ENST00000476183 ALDH7A1P49419 539 aaKnown RBP23.37■■□□□ 1.33
LIME1-204ENST00000476183 RNASELQ05823 741 aaKnown RBP23.37■■□□□ 1.33
LIME1-204ENST00000476183 MAPK6Q16659 721 aa23.37■■□□□ 1.33
LIME1-204ENST00000476183 RBM23Q86U06 439 aaKnown RBP23.37■■□□□ 1.33
LIME1-204ENST00000476183 URGCPQ8TCY9 931 aa23.37■■□□□ 1.33
LIME1-204ENST00000476183 BCL7CQ8WUZ0 217 aaPredicted RBP23.37■■□□□ 1.33
LIME1-204ENST00000476183 GAD1Q99259 594 aa23.37■■□□□ 1.33
LIME1-204ENST00000476183 APOL6Q9BWW8 343 aa23.37■■□□□ 1.33
LIME1-204ENST00000476183 TRIM6Q9C030 488 aaPredicted RBP23.37■■□□□ 1.33
LIME1-204ENST00000476183 NT5C3AQ9H0P0 336 aa23.37■■□□□ 1.33
LIME1-204ENST00000476183 PDZD7Q9H5P4 517 aa23.37■■□□□ 1.33
LIME1-204ENST00000476183 PUF60Q9UHX1 559 aaKnown RBP23.37■■□□□ 1.33
LIME1-204ENST00000476183 ACKR2O00590 384 aa23.36■■□□□ 1.33
LIME1-204ENST00000476183 INPPL1O15357 1258 aa23.36■■□□□ 1.33
LIME1-204ENST00000476183 STX6O43752 255 aa23.36■■□□□ 1.33
LIME1-204ENST00000476183 TBX10O75333 385 aa23.36■■□□□ 1.33
LIME1-204ENST00000476183 LIG1P18858 919 aa23.36■■□□□ 1.33
LIME1-204ENST00000476183 MLH1P40692 756 aa23.36■■□□□ 1.33
LIME1-204ENST00000476183 SLC11A1P49279 550 aa23.36■■□□□ 1.33
LIME1-204ENST00000476183 SLC12A3P55017 1021 aa23.36■■□□□ 1.33
LIME1-204ENST00000476183 KRT17Q04695 432 aa23.36■■□□□ 1.33
LIME1-204ENST00000476183 ADAM15Q13444 863 aa23.36■■□□□ 1.33
LIME1-204ENST00000476183 PLPP4Q5VZY2 271 aa23.36■■□□□ 1.33
LIME1-204ENST00000476183 SYT2Q8N9I0 419 aaPredicted RBP23.36■■□□□ 1.33
LIME1-204ENST00000476183 PPP2R3CQ969Q6 453 aa23.36■■□□□ 1.33
LIME1-204ENST00000476183 ZFP42Q96MM3 310 aa23.36■■□□□ 1.33
LIME1-204ENST00000476183 TCF25Q9BQ70 676 aa23.36■■□□□ 1.33
LIME1-204ENST00000476183 UBN1Q9NPG3 1134 aa23.36■■□□□ 1.33
LIME1-204ENST00000476183 MIOSQ9NXC5 875 aa23.36■■□□□ 1.33
LIME1-204ENST00000476183 ARL5CA6NH57 179 aa23.35■■□□□ 1.33
LIME1-204ENST00000476183 PER2O15055 1255 aa23.35■■□□□ 1.33
LIME1-204ENST00000476183 SSBP05455 408 aaKnown RBP eCLIP23.35■■□□□ 1.33
LIME1-204ENST00000476183 PLA2G4BP0C869 781 aa23.35■■□□□ 1.33
LIME1-204ENST00000476183 AKAP5P24588 427 aa23.35■■□□□ 1.33
LIME1-204ENST00000476183 LONP1P36776 959 aaKnown RBP23.35■■□□□ 1.33
LIME1-204ENST00000476183 NPTX2P47972 431 aa23.35■■□□□ 1.33
LIME1-204ENST00000476183 PEX3P56589 373 aa23.35■■□□□ 1.33
LIME1-204ENST00000476183 PRPF4BQ13523 1007 aaKnown RBP23.35■■□□□ 1.33
LIME1-204ENST00000476183 KCTD17Q8N5Z5 321 aa23.35■■□□□ 1.33
LIME1-204ENST00000476183 EFHBQ8N7U6 833 aa23.35■■□□□ 1.33
LIME1-204ENST00000476183 IGSF21Q96ID5 467 aa23.35■■□□□ 1.33
LIME1-204ENST00000476183 CDK5RAP3Q96JB5 506 aa23.35■■□□□ 1.33
LIME1-204ENST00000476183 TLE6Q9H808 572 aa23.35■■□□□ 1.33
LIME1-204ENST00000476183 KANSL3Q9P2N6 904 aa23.35■■□□□ 1.33
LIME1-204ENST00000476183 SFI1A8K8P3 1242 aa23.34■■□□□ 1.33
LIME1-204ENST00000476183 HIDE1A8MVS5 230 aa23.34■■□□□ 1.33
LIME1-204ENST00000476183 GUCY2CP25092 1073 aa23.34■■□□□ 1.33
LIME1-204ENST00000476183 MARCKSP29966 332 aaPredicted RBP23.34■■□□□ 1.33
LIME1-204ENST00000476183 UBA7P41226 1012 aa23.34■■□□□ 1.33
LIME1-204ENST00000476183 SCNN1GP51170 649 aa23.34■■□□□ 1.33
LIME1-204ENST00000476183 EFNA5P52803 228 aa23.34■■□□□ 1.33
LIME1-204ENST00000476183 RAD51AP2Q09MP3 1159 aa23.34■■□□□ 1.33
LIME1-204ENST00000476183 NT5DC1Q5TFE4 455 aa23.34■■□□□ 1.33
LIME1-204ENST00000476183 EEF1DP3Q658K8 133 aa23.34■■□□□ 1.33
LIME1-204ENST00000476183 PTCRAQ6ISU1 281 aaPredicted RBP23.34■■□□□ 1.33
LIME1-204ENST00000476183 PDE12Q6L8Q7 609 aaKnown RBP23.34■■□□□ 1.33
LIME1-204ENST00000476183 HSCBQ8IWL3 235 aa23.34■■□□□ 1.33
LIME1-204ENST00000476183 GSTCDQ8NEC7 633 aa23.34■■□□□ 1.33
LIME1-204ENST00000476183 TMEM169Q96HH4 297 aa23.34■■□□□ 1.33
LIME1-204ENST00000476183 DRC1Q96MC2 740 aa23.34■■□□□ 1.33
LIME1-204ENST00000476183 ENTPD7Q9NQZ7 604 aa23.34■■□□□ 1.33
LIME1-204ENST00000476183 GIT1Q9Y2X7 761 aa23.34■■□□□ 1.33
LIME1-204ENST00000476183 C5orf42Q9H799 3197 aa23.34■■□□□ 1.33
LIME1-204ENST00000476183 CCDC169A6NNP5 214 aa23.33■■□□□ 1.33
LIME1-204ENST00000476183 N4BP3O15049 544 aa23.33■■□□□ 1.33
LIME1-204ENST00000476183 SLC26A4O43511 780 aa23.33■■□□□ 1.33
LIME1-204ENST00000476183 GLP2RO95838 553 aa23.33■■□□□ 1.33
LIME1-204ENST00000476183 IL9P15248 144 aa23.33■■□□□ 1.33
LIME1-204ENST00000476183 RBM10P98175 930 aaKnown RBP23.33■■□□□ 1.33
LIME1-204ENST00000476183 CEBPZQ03701 1054 aaKnown RBP23.33■■□□□ 1.33
LIME1-204ENST00000476183 KARSQ15046 597 aaKnown RBP23.33■■□□□ 1.33
LIME1-204ENST00000476183 CLUL1Q15846 466 aa23.33■■□□□ 1.33
LIME1-204ENST00000476183 DUSP6Q16828 381 aa23.33■■□□□ 1.33
LIME1-204ENST00000476183 TAS1R3Q7RTX0 852 aa23.33■■□□□ 1.33
LIME1-204ENST00000476183 TMC7Q7Z402 723 aa23.33■■□□□ 1.33
LIME1-204ENST00000476183 VN1R2Q8NFZ6 395 aa23.33■■□□□ 1.33
LIME1-204ENST00000476183 VN1R3Q9BXE9 311 aa23.33■■□□□ 1.33
LIME1-204ENST00000476183 NGRNQ9NPE2 291 aaKnown RBP23.33■■□□□ 1.33
LIME1-204ENST00000476183 BLOC1S4Q9NUP1 217 aa23.33■■□□□ 1.33
LIME1-204ENST00000476183 CLEC1BQ9P126 229 aa23.33■■□□□ 1.33
LIME1-204ENST00000476183 ARHGAP28Q9P2N2 729 aa23.33■■□□□ 1.33
LIME1-204ENST00000476183 FBXO2Q9UK22 296 aaPredicted RBP23.33■■□□□ 1.33
LIME1-204ENST00000476183 TDRD15B5MCY1 1934 aaKnown RBP23.33■■□□□ 1.32
LIME1-204ENST00000476183 MYH11P35749 1972 aa23.32■■□□□ 1.32
LIME1-204ENST00000476183 NPHP3-ACAD11A0A0J9YXS1 232 aa23.32■■□□□ 1.32
LIME1-204ENST00000476183 GRXCR2A6NFK2 248 aa23.32■■□□□ 1.32
LIME1-204ENST00000476183 DMP1Q13316 513 aaPredicted RBP23.32■■□□□ 1.32
LIME1-204ENST00000476183 TMEM132AQ24JP5 1023 aa23.32■■□□□ 1.32
LIME1-204ENST00000476183 ARSHQ5FYA8 562 aa23.32■■□□□ 1.32
LIME1-204ENST00000476183 SPECC1Q5M775 1068 aa23.32■■□□□ 1.32
LIME1-204ENST00000476183 USP49Q70CQ1 688 aa23.32■■□□□ 1.32
LIME1-204ENST00000476183 COLGALT2Q8IYK4 626 aa23.32■■□□□ 1.32
LIME1-204ENST00000476183 HACE1Q8IYU2 909 aa23.32■■□□□ 1.32
LIME1-204ENST00000476183 CALML4Q96GE6 196 aa23.32■■□□□ 1.32
LIME1-204ENST00000476183 FAM193BQ96PV7 902 aaPredicted RBP23.32■■□□□ 1.32
LIME1-204ENST00000476183 USP28Q96RU2 1077 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms