RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 MXI1P50539 228 aa17.28■□□□□ 0.36
VARS2-207ENST00000476162 EPHB4P54760 987 aa17.28■□□□□ 0.36
VARS2-207ENST00000476162 PRKG1Q13976 671 aa17.28■□□□□ 0.36
VARS2-207ENST00000476162 SNRNP35Q16560 246 aaKnown RBP17.28■□□□□ 0.36
VARS2-207ENST00000476162 NT5DC3Q86UY8 548 aa17.28■□□□□ 0.36
VARS2-207ENST00000476162 IFT20Q8IY31 132 aa17.28■□□□□ 0.36
VARS2-207ENST00000476162 SYCE1Q8N0S2 351 aa17.28■□□□□ 0.36
VARS2-207ENST00000476162 SLC20A1Q8WUM9 679 aa17.28■□□□□ 0.36
VARS2-207ENST00000476162 CTNNBL1Q8WYA6 563 aaPredicted RBP17.28■□□□□ 0.36
VARS2-207ENST00000476162 RFFLQ8WZ73 363 aa17.28■□□□□ 0.36
VARS2-207ENST00000476162 KAT5Q92993 513 aa17.28■□□□□ 0.36
VARS2-207ENST00000476162 AGPAT1Q99943 283 aa17.28■□□□□ 0.36
VARS2-207ENST00000476162 ACAD9Q9H845 621 aa17.28■□□□□ 0.36
VARS2-207ENST00000476162 EPB41L5Q9HCM4 733 aa17.28■□□□□ 0.36
VARS2-207ENST00000476162 JPH1Q9HDC5 661 aaPredicted RBP17.28■□□□□ 0.36
VARS2-207ENST00000476162 TMOD4Q9NZQ9 345 aa17.28■□□□□ 0.36
VARS2-207ENST00000476162 PHIPQ8WWQ0 1821 aa17.27■□□□□ 0.36
VARS2-207ENST00000476162 ESYT3A0FGR9 886 aa17.27■□□□□ 0.36
VARS2-207ENST00000476162 CCDC189A1A4V9 331 aa17.27■□□□□ 0.36
VARS2-207ENST00000476162 AGPSO00116 658 aa17.27■□□□□ 0.36
VARS2-207ENST00000476162 GUCY2DQ02846 1103 aa17.27■□□□□ 0.36
VARS2-207ENST00000476162 DNAJC21Q5F1R6 531 aaKnown RBP17.27■□□□□ 0.36
VARS2-207ENST00000476162 KLHL7Q8IXQ5 586 aa17.27■□□□□ 0.36
VARS2-207ENST00000476162 ACTRT1Q8TDG2 376 aa17.27■□□□□ 0.36
VARS2-207ENST00000476162 KIFAP3Q92845 792 aa17.27■□□□□ 0.36
VARS2-207ENST00000476162 CCDC127Q96BQ5 260 aa17.27■□□□□ 0.36
VARS2-207ENST00000476162 NTPCRQ9BSD7 190 aaKnown RBP17.27■□□□□ 0.36
VARS2-207ENST00000476162 THAP2Q9H0W7 228 aa17.27■□□□□ 0.36
VARS2-207ENST00000476162 GDF3Q9NR23 364 aa17.27■□□□□ 0.36
VARS2-207ENST00000476162 SUCLA2Q9P2R7 463 aaPredicted RBP17.27■□□□□ 0.36
VARS2-207ENST00000476162 PFASO15067 1338 aa17.27■□□□□ 0.36
VARS2-207ENST00000476162 BUB1BO60566 1050 aaPredicted RBP17.27■□□□□ 0.35
VARS2-207ENST00000476162 RNF40O75150 1001 aa17.27■□□□□ 0.35
VARS2-207ENST00000476162 PSAPP07602 524 aa17.27■□□□□ 0.35
VARS2-207ENST00000476162 CARSP49589 748 aaKnown RBP17.27■□□□□ 0.35
VARS2-207ENST00000476162 MAP2K1Q02750 393 aaPredicted RBP17.27■□□□□ 0.35
VARS2-207ENST00000476162 EMBQ6PCB8 327 aa17.27■□□□□ 0.35
VARS2-207ENST00000476162 CCDC60Q8IWA6 550 aaPredicted RBP17.27■□□□□ 0.35
VARS2-207ENST00000476162 CNPY4Q8N129 248 aa17.27■□□□□ 0.35
VARS2-207ENST00000476162 KAT2BQ92831 832 aa17.27■□□□□ 0.35
VARS2-207ENST00000476162 ARHGEF26Q96DR7 871 aa17.27■□□□□ 0.35
VARS2-207ENST00000476162 GPRC5DQ9NZD1 345 aa17.27■□□□□ 0.35
VARS2-207ENST00000476162 SLC9A2Q9UBY0 812 aa17.27■□□□□ 0.35
VARS2-207ENST00000476162 NCANO14594 1321 aa17.26■□□□□ 0.35
VARS2-207ENST00000476162 SPDYE16A6NNV3 312 aaPredicted RBP17.26■□□□□ 0.35
VARS2-207ENST00000476162 HIRAP54198 1017 aaPredicted RBP17.26■□□□□ 0.35
VARS2-207ENST00000476162 ACTR2P61160 394 aa17.26■□□□□ 0.35
VARS2-207ENST00000476162 TNNC1P63316 161 aa17.26■□□□□ 0.35
VARS2-207ENST00000476162 CEP120Q8N960 986 aa17.26■□□□□ 0.35
VARS2-207ENST00000476162 SCFD2Q8WU76 684 aa17.26■□□□□ 0.35
VARS2-207ENST00000476162 SPIRE2Q8WWL2 714 aa17.26■□□□□ 0.35
VARS2-207ENST00000476162 HVCN1Q96D96 273 aa17.26■□□□□ 0.35
VARS2-207ENST00000476162 POP1Q99575 1024 aaKnown RBP17.26■□□□□ 0.35
VARS2-207ENST00000476162 HOXC10Q9NYD6 342 aa17.26■□□□□ 0.35
VARS2-207ENST00000476162 AFG3L2Q9Y4W6 797 aa17.26■□□□□ 0.35
VARS2-207ENST00000476162 GOLGA6BA6NDN3 693 aa17.25■□□□□ 0.35
VARS2-207ENST00000476162 RAD51CO43502 376 aa17.25■□□□□ 0.35
VARS2-207ENST00000476162 USP8P40818 1118 aa17.25■□□□□ 0.35
VARS2-207ENST00000476162 PPATQ06203 517 aa17.25■□□□□ 0.35
VARS2-207ENST00000476162 R3HDM1Q15032 1099 aaKnown RBP17.25■□□□□ 0.35
VARS2-207ENST00000476162 SLC39A4Q6P5W5 647 aa17.25■□□□□ 0.35
VARS2-207ENST00000476162 PARD3BQ8TEW8 1205 aa17.25■□□□□ 0.35
VARS2-207ENST00000476162 IFT81Q8WYA0 676 aa17.25■□□□□ 0.35
VARS2-207ENST00000476162 SEMA4DQ92854 862 aa17.25■□□□□ 0.35
VARS2-207ENST00000476162 HES6Q96HZ4 224 aa17.25■□□□□ 0.35
VARS2-207ENST00000476162 CDHR1Q96JP9 859 aa17.25■□□□□ 0.35
VARS2-207ENST00000476162 SGIP1Q9BQI5 828 aa17.25■□□□□ 0.35
VARS2-207ENST00000476162 AP1M1Q9BXS5 423 aa17.25■□□□□ 0.35
VARS2-207ENST00000476162 FAM107BQ9H098 131 aa17.25■□□□□ 0.35
VARS2-207ENST00000476162 C17orf75Q9HAS0 396 aa17.25■□□□□ 0.35
VARS2-207ENST00000476162 SEPT9Q9UHD8 586 aaPredicted RBP17.25■□□□□ 0.35
VARS2-207ENST00000476162 NFU1Q9UMS0 254 aa17.25■□□□□ 0.35
VARS2-207ENST00000476162 ADGRA3Q8IWK6 1321 aa17.25■□□□□ 0.35
VARS2-207ENST00000476162 ANKRD62A6NC57 917 aa17.25■□□□□ 0.35
VARS2-207ENST00000476162 SPATA31C2B4DYI2 1134 aa17.25■□□□□ 0.35
VARS2-207ENST00000476162 PGRMC1O00264 195 aaKnown RBP17.25■□□□□ 0.35
VARS2-207ENST00000476162 PMM2O15305 246 aa17.25■□□□□ 0.35
VARS2-207ENST00000476162 DKC1O60832 514 aaKnown RBP eCLIP17.25■□□□□ 0.35
VARS2-207ENST00000476162 PRKCEQ02156 737 aa17.25■□□□□ 0.35
VARS2-207ENST00000476162 ABHD15Q6UXT9 468 aa17.25■□□□□ 0.35
VARS2-207ENST00000476162 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.25■□□□□ 0.35
VARS2-207ENST00000476162 CAVIN3Q969G5 261 aa17.25■□□□□ 0.35
VARS2-207ENST00000476162 VTI1AQ96AJ9 217 aa17.25■□□□□ 0.35
VARS2-207ENST00000476162 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.25■□□□□ 0.353e-9■■■■□ 26.7
VARS2-207ENST00000476162 XPNPEP1Q9NQW7 623 aa17.25■□□□□ 0.35
VARS2-207ENST00000476162 PDLIM7Q9NR12 457 aa17.25■□□□□ 0.35
VARS2-207ENST00000476162 AMFRQ9UKV5 643 aa17.25■□□□□ 0.35
VARS2-207ENST00000476162 NOC2LQ9Y3T9 749 aaKnown RBP17.25■□□□□ 0.35
VARS2-207ENST00000476162 NFASCO94856 1347 aa17.25■□□□□ 0.35
VARS2-207ENST00000476162 SSC5DA1L4H1 1573 aa17.25■□□□□ 0.35
VARS2-207ENST00000476162 KIAA1217Q5T5P2 1943 aa17.25■□□□□ 0.35
VARS2-207ENST00000476162 DGAT1O75907 488 aa17.24■□□□□ 0.35
VARS2-207ENST00000476162 HNRNPH1P31943 449 aaKnown RBP17.24■□□□□ 0.35
VARS2-207ENST00000476162 MCCD1P59942 119 aaPredicted RBP17.24■□□□□ 0.35
VARS2-207ENST00000476162 SP2Q02086 613 aa17.24■□□□□ 0.35
VARS2-207ENST00000476162 GNPTABQ3T906 1256 aa17.24■□□□□ 0.35
VARS2-207ENST00000476162 RPUSD2Q8IZ73 545 aaKnown RBP17.24■□□□□ 0.35
VARS2-207ENST00000476162 PPM1KQ8N3J5 372 aa17.24■□□□□ 0.35
VARS2-207ENST00000476162 TSEN2Q8NCE0 465 aaKnown RBP17.24■□□□□ 0.35
VARS2-207ENST00000476162 NLGN2Q8NFZ4 835 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms