RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 CCDC90BQ9GZT6 254 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 ING2Q9H160 280 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 KIF17Q9P2E2 1029 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 EIF4E1BA6NMX2 242 aaKnown RBP11.64□□□□□ -0.55
VAPB-204ENST00000475243 TFDP2Q14188 446 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 ZBED8Q8IZ13 594 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 RMDN1Q96DB5 314 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 GCOM2Q9BZD3 368 aaPredicted RBP11.64□□□□□ -0.55
VAPB-204ENST00000475243 IP6K2Q9UHH9 426 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 ZFP69BQ9UJL9 534 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.64□□□□□ -0.55
VAPB-204ENST00000475243 KRT38O76015 456 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 CDH6P55285 790 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 PSMC5P62195 406 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 SLC30A5Q8TAD4 765 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 KCNV2Q8TDN2 545 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 INTS2Q9H0H0 1204 aaKnown RBP11.64□□□□□ -0.55
VAPB-204ENST00000475243 ALG13Q9NP73 1137 aaKnown RBP11.64□□□□□ -0.55
VAPB-204ENST00000475243 PDHA1P08559 390 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 DUOXA2Q1HG44 320 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 DIS3Q9Y2L1 958 aaKnown RBP11.64□□□□□ -0.55
VAPB-204ENST00000475243 ARHGEF5Q12774 1597 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 SAMD9LQ8IVG5 1584 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 ZSCAN9O15535 394 aaPredicted RBP11.64□□□□□ -0.55
VAPB-204ENST00000475243 PRPF4O43172 522 aaKnown RBP eCLIP11.64□□□□□ -0.55
VAPB-204ENST00000475243 YWHABP31946 246 aaKnown RBP11.64□□□□□ -0.55
VAPB-204ENST00000475243 MDM2Q00987 491 aaPredicted RBP11.64□□□□□ -0.55
VAPB-204ENST00000475243 FASTKD1Q53R41 847 aaKnown RBP11.64□□□□□ -0.55
VAPB-204ENST00000475243 C1orf146Q5VVC0 180 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 BRINP3Q76B58 766 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 PODNQ7Z5L7 613 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 DDIASQ8IXT1 998 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 RNF149Q8NC42 400 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 SCG3Q8WXD2 468 aaKnown RBP11.64□□□□□ -0.55
VAPB-204ENST00000475243 PBXIP1Q96AQ6 731 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 CTIFO43310 598 aaKnown RBP11.64□□□□□ -0.55
VAPB-204ENST00000475243 GUCY1A2P33402 732 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 MTMR2Q13614 643 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 GRM4Q14833 912 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 EMBQ6PCB8 327 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 CCDC137Q6PK04 289 aaKnown RBP11.64□□□□□ -0.55
VAPB-204ENST00000475243 ANKMY2Q8IV38 441 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 ZNF579Q8NAF0 562 aaKnown RBP11.64□□□□□ -0.55
VAPB-204ENST00000475243 MAGEB5Q9BZ81 275 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 C2orf40Q9H1Z8 148 aa11.64□□□□□ -0.55
VAPB-204ENST00000475243 RPAP1Q9BWH6 1393 aaPredicted RBP11.63□□□□□ -0.55
VAPB-204ENST00000475243 AFF2P51816 1311 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 MAGI3Q5TCQ9 1506 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 CCDC78A2IDD5 438 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 GOLGA8RI6L899 631 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 ERFP50548 548 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 HMGCS2P54868 508 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 DAB2P98082 770 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 EN1Q05925 392 aaPredicted RBP11.63□□□□□ -0.55
VAPB-204ENST00000475243 ANKRD40Q6AI12 368 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 OR6J1Q8NGC5 347 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 MS4A14Q96JA4 679 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 TEKT2Q9UIF3 430 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 CDK12Q9NYV4 1490 aaPredicted RBP11.63□□□□□ -0.55
VAPB-204ENST00000475243 MYO3BQ8WXR4 1341 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 GSG1L2A8MUP6 293 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 UPP2O95045 317 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 SH3BGRP55822 239 aaPredicted RBP11.63□□□□□ -0.55
VAPB-204ENST00000475243 BCAR1P56945 870 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 COBLL1Q53SF7 1204 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 CASS4Q9NQ75 786 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 MCF2P10911 925 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 ACOT2P49753 483 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 EFTUD2Q15029 972 aaKnown RBP eCLIP11.63□□□□□ -0.55
VAPB-204ENST00000475243 FSCBQ5H9T9 825 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 EFHC2Q5JST6 749 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 BTBD6Q96KE9 485 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 FARP1Q9Y4F1 1045 aaPredicted RBP11.63□□□□□ -0.55
VAPB-204ENST00000475243 KPNA7A9QM74 516 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 SYF2O95926 243 aaKnown RBP11.63□□□□□ -0.55
VAPB-204ENST00000475243 AKR1B1P15121 316 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 ATP6V1E1P36543 226 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 MFSD14CQ5VZR4 134 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 NMT1P30419 496 aaKnown RBP11.63□□□□□ -0.55
VAPB-204ENST00000475243 SFNP31947 248 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 IFNA8P32881 189 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 SCARF1Q14162 830 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 PTK2BQ14289 1009 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 MDH1BQ5I0G3 518 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 FMR1NBQ8N0W7 255 aaPredicted RBP11.63□□□□□ -0.55
VAPB-204ENST00000475243 PGBD4Q96DM1 585 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 ACAP3Q96P50 834 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 WARS2Q9UGM6 360 aaKnown RBP11.63□□□□□ -0.55
VAPB-204ENST00000475243 STAP1Q9ULZ2 295 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 TRIM33Q9UPN9 1127 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 PIN4Q9Y237 131 aaKnown RBP11.63□□□□□ -0.55
VAPB-204ENST00000475243 TTC26A0AVF1 554 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 CYP26A1O43174 497 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 KRT14P02533 472 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 ARL8AQ96BM9 186 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 ACAD9Q9H845 621 aa11.63□□□□□ -0.55
VAPB-204ENST00000475243 FAM95CA0A1B0GW59 222 aa11.62□□□□□ -0.55
VAPB-204ENST00000475243 HMBSP08397 361 aa11.62□□□□□ -0.55
VAPB-204ENST00000475243 KRT7P08729 469 aa11.62□□□□□ -0.55
VAPB-204ENST00000475243 MYBP10242 640 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms