RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 CYFIP1Q7L576 1253 aa13.45□□□□□ -0.26
RNF220-211ENST00000474956 CCDC60Q8IWA6 550 aaPredicted RBP13.45□□□□□ -0.26
RNF220-211ENST00000474956 CABS1Q96KC9 395 aa13.45□□□□□ -0.26
RNF220-211ENST00000474956 TAF1DQ9H5J8 278 aaPredicted RBP13.45□□□□□ -0.26
RNF220-211ENST00000474956 A1CFQ9NQ94 594 aaKnown RBP13.45□□□□□ -0.26
RNF220-211ENST00000474956 DOCK1Q14185 1865 aa13.45□□□□□ -0.26
RNF220-211ENST00000474956 PRKCIP41743 596 aa13.45□□□□□ -0.26
RNF220-211ENST00000474956 WNT7BP56706 349 aa13.45□□□□□ -0.26
RNF220-211ENST00000474956 TREML2Q5T2D2 321 aa13.45□□□□□ -0.26
RNF220-211ENST00000474956 SLC39A4Q6P5W5 647 aa13.45□□□□□ -0.26
RNF220-211ENST00000474956 MAATS1Q7Z4T9 603 aa13.45□□□□□ -0.26
RNF220-211ENST00000474956 TPCN2Q8NHX9 752 aa13.45□□□□□ -0.26
RNF220-211ENST00000474956 TAF4BQ92750 862 aa13.45□□□□□ -0.26
RNF220-211ENST00000474956 THAP2Q9H0W7 228 aa13.45□□□□□ -0.26
RNF220-211ENST00000474956 VPS33BQ9H267 617 aa13.45□□□□□ -0.26
RNF220-211ENST00000474956 LARSQ9P2J5 1176 aaKnown RBP13.45□□□□□ -0.26
RNF220-211ENST00000474956 SEL1LQ9UBV2 794 aa13.45□□□□□ -0.26
RNF220-211ENST00000474956 APEX2Q9UBZ4 518 aa13.45□□□□□ -0.26
RNF220-211ENST00000474956 TCEAL9Q9UHQ7 104 aa13.45□□□□□ -0.26
RNF220-211ENST00000474956 NR2E1Q9Y466 385 aa13.45□□□□□ -0.26
RNF220-211ENST00000474956 RAD51CO43502 376 aa13.44□□□□□ -0.26
RNF220-211ENST00000474956 NPTX2P47972 431 aa13.44□□□□□ -0.26
RNF220-211ENST00000474956 VAMP7P51809 220 aa13.44□□□□□ -0.26
RNF220-211ENST00000474956 LRIG3Q6UXM1 1119 aa13.44□□□□□ -0.26
RNF220-211ENST00000474956 VSIG10LQ86VR7 867 aa13.44□□□□□ -0.26
RNF220-211ENST00000474956 NLRP14Q86W24 1093 aa13.44□□□□□ -0.26
RNF220-211ENST00000474956 MYCBPAPQ8TBZ2 947 aa13.44□□□□□ -0.26
RNF220-211ENST00000474956 CCT8L2Q96SF2 557 aa13.44□□□□□ -0.26
RNF220-211ENST00000474956 MYCBPQ99417 103 aaPredicted RBP13.44□□□□□ -0.26
RNF220-211ENST00000474956 ISCUQ9H1K1 167 aa13.44□□□□□ -0.26
RNF220-211ENST00000474956 PICK1Q9NRD5 415 aa13.44□□□□□ -0.26
RNF220-211ENST00000474956 TMEM59LQ9UK28 342 aa13.44□□□□□ -0.26
RNF220-211ENST00000474956 COG5Q9UP83 839 aa13.44□□□□□ -0.26
RNF220-211ENST00000474956 PLAAQ9Y263 795 aa13.44□□□□□ -0.26
RNF220-211ENST00000474956 FAM107AO95990 144 aa13.44□□□□□ -0.26
RNF220-211ENST00000474956 STAT1P42224 750 aa13.44□□□□□ -0.26
RNF220-211ENST00000474956 CEP85LQ5SZL2 805 aa13.44□□□□□ -0.26
RNF220-211ENST00000474956 DDX42Q86XP3 938 aaKnown RBP eCLIP13.44□□□□□ -0.26
RNF220-211ENST00000474956 SLC30A5Q8TAD4 765 aa13.44□□□□□ -0.26
RNF220-211ENST00000474956 DHX38Q92620 1227 aaKnown RBP13.44□□□□□ -0.26
RNF220-211ENST00000474956 PI4K2AQ9BTU6 479 aa13.44□□□□□ -0.26
RNF220-211ENST00000474956 PHIPQ8WWQ0 1821 aa13.44□□□□□ -0.26
RNF220-211ENST00000474956 CEP104O60308 925 aa13.44□□□□□ -0.26
RNF220-211ENST00000474956 KCNA2P16389 499 aa13.44□□□□□ -0.26
RNF220-211ENST00000474956 LLGL1Q15334 1064 aa13.44□□□□□ -0.26
RNF220-211ENST00000474956 METTL13Q8N6R0 699 aa13.44□□□□□ -0.26
RNF220-211ENST00000474956 CEP170P1Q96L14 293 aa13.44□□□□□ -0.26
RNF220-211ENST00000474956 SYT11Q9BT88 431 aa13.44□□□□□ -0.26
RNF220-211ENST00000474956 STK33Q9BYT3 514 aa13.44□□□□□ -0.26
RNF220-211ENST00000474956 TMEM117Q9H0C3 514 aa13.44□□□□□ -0.26
RNF220-211ENST00000474956 TMBIM4Q9HC24 238 aa13.44□□□□□ -0.26
RNF220-211ENST00000474956 LCTP09848 1927 aa13.44□□□□□ -0.26
RNF220-211ENST00000474956 DENND3A2RUS2 1198 aa13.43□□□□□ -0.26
RNF220-211ENST00000474956 BTNL10A8MVZ5 291 aa13.43□□□□□ -0.26
RNF220-211ENST00000474956 PPP1R12BO60237 982 aaPredicted RBP13.43□□□□□ -0.26
RNF220-211ENST00000474956 ZBTB48P10074 688 aaPredicted RBP13.43□□□□□ -0.26
RNF220-211ENST00000474956 PSMC5P62195 406 aa13.43□□□□□ -0.26
RNF220-211ENST00000474956 CUL1Q13616 776 aa13.43□□□□□ -0.26
RNF220-211ENST00000474956 HLTFQ14527 1009 aaKnown RBP eCLIP13.43□□□□□ -0.26
RNF220-211ENST00000474956 RPS6KA1Q15418 735 aa13.43□□□□□ -0.26
RNF220-211ENST00000474956 C10orf76Q5T2E6 689 aa13.43□□□□□ -0.26
RNF220-211ENST00000474956 MOB2Q70IA6 237 aa13.43□□□□□ -0.26
RNF220-211ENST00000474956 EEPD1Q7L9B9 569 aa13.43□□□□□ -0.26
RNF220-211ENST00000474956 DAAM2Q86T65 1068 aa13.43□□□□□ -0.26
RNF220-211ENST00000474956 TMEM161BQ8NDZ6 487 aa13.43□□□□□ -0.26
RNF220-211ENST00000474956 MTFR1LQ9H019 292 aa13.43□□□□□ -0.26
RNF220-211ENST00000474956 GTPBP10A4D1E9 387 aaKnown RBP13.43□□□□□ -0.26
RNF220-211ENST00000474956 WDR64B1ANS9 1081 aa13.43□□□□□ -0.26
RNF220-211ENST00000474956 BUB1BO60566 1050 aaPredicted RBP13.43□□□□□ -0.26
RNF220-211ENST00000474956 STBD1O95210 358 aa13.43□□□□□ -0.26
RNF220-211ENST00000474956 KIF4AO95239 1232 aa13.43□□□□□ -0.26
RNF220-211ENST00000474956 H2AFZP0C0S5 128 aa13.43□□□□□ -0.26
RNF220-211ENST00000474956 GHRHRQ02643 423 aa13.43□□□□□ -0.26
RNF220-211ENST00000474956 EPC2Q52LR7 807 aa13.43□□□□□ -0.26
RNF220-211ENST00000474956 H2AFVQ71UI9 128 aa13.43□□□□□ -0.26
RNF220-211ENST00000474956 SLC35G2Q8TBE7 412 aa13.43□□□□□ -0.26
RNF220-211ENST00000474956 LRRC45Q96CN5 670 aa13.43□□□□□ -0.26
RNF220-211ENST00000474956 KLRG1Q96E93 195 aa13.43□□□□□ -0.26
RNF220-211ENST00000474956 XPNPEP1Q9NQW7 623 aa13.43□□□□□ -0.26
RNF220-211ENST00000474956 TBC1D22BQ9NU19 505 aa13.43□□□□□ -0.26
RNF220-211ENST00000474956 CYP39A1Q9NYL5 469 aa13.43□□□□□ -0.26
RNF220-211ENST00000474956 KCND2Q9NZV8 630 aa13.43□□□□□ -0.26
RNF220-211ENST00000474956 DBR1Q9UK59 544 aaKnown RBP13.43□□□□□ -0.26
RNF220-211ENST00000474956 SGPL1O95470 568 aa13.42□□□□□ -0.26
RNF220-211ENST00000474956 MYZAPP0CAP1 466 aa13.42□□□□□ -0.26
RNF220-211ENST00000474956 DSG3P32926 999 aa13.42□□□□□ -0.26
RNF220-211ENST00000474956 SEC24CP53992 1094 aa13.42□□□□□ -0.26
RNF220-211ENST00000474956 ZNF211Q13398 564 aaPredicted RBP13.42□□□□□ -0.26
RNF220-211ENST00000474956 NLRX1Q86UT6 975 aa13.42□□□□□ -0.26
RNF220-211ENST00000474956 PBKQ96KB5 322 aa13.42□□□□□ -0.26
RNF220-211ENST00000474956 ACCSQ96QU6 501 aa13.42□□□□□ -0.26
RNF220-211ENST00000474956 MKNK1Q9BUB5 465 aa13.42□□□□□ -0.26
RNF220-211ENST00000474956 SEPT9Q9UHD8 586 aaPredicted RBP13.42□□□□□ -0.26
RNF220-211ENST00000474956 SPDYE16A6NNV3 312 aaPredicted RBP13.42□□□□□ -0.26
RNF220-211ENST00000474956 MYO1FO00160 1098 aa13.42□□□□□ -0.26
RNF220-211ENST00000474956 SSTR3P32745 418 aaPredicted RBP13.42□□□□□ -0.26
RNF220-211ENST00000474956 GTF2BQ00403 316 aa13.42□□□□□ -0.26
RNF220-211ENST00000474956 MKRN4PQ13434 485 aaPredicted RBP13.42□□□□□ -0.26
RNF220-211ENST00000474956 IFI16Q16666 785 aaKnown RBP13.42□□□□□ -0.26
RNF220-211ENST00000474956 DCAF12L1Q5VU92 463 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms