RNA–Protein interactions for RNA: ENST00000474309.1

EXOSC1-207, Transcript of exosome component 1, humanhuman

TSL 5

Gene EXOSC1, Length 260 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-207ENST00000474309 SRGAP2CP0DJJ0 459 aa12.87□□□□□ -0.35
EXOSC1-207ENST00000474309 ITGA4P13612 1032 aa12.87□□□□□ -0.35
EXOSC1-207ENST00000474309 GCFC2P16383 781 aaKnown RBP12.87□□□□□ -0.35
EXOSC1-207ENST00000474309 DSC1Q08554 894 aa12.87□□□□□ -0.35
EXOSC1-207ENST00000474309 EPHA7Q15375 998 aa12.87□□□□□ -0.35
EXOSC1-207ENST00000474309 ANGPT1Q15389 498 aa12.87□□□□□ -0.35
EXOSC1-207ENST00000474309 PLA2G4FQ68DD2 849 aa12.87□□□□□ -0.35
EXOSC1-207ENST00000474309 CPLX2Q6PUV4 134 aaKnown RBP12.87□□□□□ -0.35
EXOSC1-207ENST00000474309 RUFY3Q7L099 469 aa12.87□□□□□ -0.35
EXOSC1-207ENST00000474309 FERMT3Q86UX7 667 aa12.87□□□□□ -0.35
EXOSC1-207ENST00000474309 ADSSL1Q8N142 457 aa12.87□□□□□ -0.35
EXOSC1-207ENST00000474309 SLC44A3Q8N4M1 653 aa12.87□□□□□ -0.35
EXOSC1-207ENST00000474309 SMG8Q8ND04 991 aaKnown RBP12.87□□□□□ -0.35
EXOSC1-207ENST00000474309 CCDC51Q96ER9 411 aa12.87□□□□□ -0.35
EXOSC1-207ENST00000474309 PLEKHA4Q9H4M7 779 aa12.87□□□□□ -0.35
EXOSC1-207ENST00000474309 KCNMB3Q9NPA1 279 aa12.87□□□□□ -0.35
EXOSC1-207ENST00000474309 MAN1C1Q9NR34 630 aa12.87□□□□□ -0.35
EXOSC1-207ENST00000474309 CPLX1O14810 134 aa12.86□□□□□ -0.35
EXOSC1-207ENST00000474309 TEX28O15482 410 aa12.86□□□□□ -0.35
EXOSC1-207ENST00000474309 N4BP1O75113 896 aaKnown RBP12.86□□□□□ -0.35
EXOSC1-207ENST00000474309 NR1I2O75469 434 aa12.86□□□□□ -0.35
EXOSC1-207ENST00000474309 REC8O95072 547 aa12.86□□□□□ -0.35
EXOSC1-207ENST00000474309 GLUD1P00367 558 aa12.86□□□□□ -0.35
EXOSC1-207ENST00000474309 POMCP01189 267 aa12.86□□□□□ -0.35
EXOSC1-207ENST00000474309 AK2P54819 239 aa12.86□□□□□ -0.35
EXOSC1-207ENST00000474309 DSG1Q02413 1049 aa12.86□□□□□ -0.35
EXOSC1-207ENST00000474309 NCBP1Q09161 790 aaKnown RBP12.86□□□□□ -0.35
EXOSC1-207ENST00000474309 TOB2Q14106 344 aaPredicted RBP12.86□□□□□ -0.35
EXOSC1-207ENST00000474309 MXD4Q14582 209 aaPredicted RBP12.86□□□□□ -0.35
EXOSC1-207ENST00000474309 INF2Q27J81 1249 aa12.86□□□□□ -0.35
EXOSC1-207ENST00000474309 TAS1R1Q7RTX1 841 aa12.86□□□□□ -0.35
EXOSC1-207ENST00000474309 IFNLR1Q8IU57 520 aaPredicted RBP12.86□□□□□ -0.35
EXOSC1-207ENST00000474309 SIX5Q8N196 739 aa12.86□□□□□ -0.35
EXOSC1-207ENST00000474309 ZNF579Q8NAF0 562 aaKnown RBP12.86□□□□□ -0.35
EXOSC1-207ENST00000474309 RNF149Q8NC42 400 aa12.86□□□□□ -0.35
EXOSC1-207ENST00000474309 TMEM143Q96AN5 459 aa12.86□□□□□ -0.35
EXOSC1-207ENST00000474309 NAP1L4Q99733 375 aaKnown RBP12.86□□□□□ -0.35
EXOSC1-207ENST00000474309 COLEC11Q9BWP8 271 aa12.86□□□□□ -0.35
EXOSC1-207ENST00000474309 SLKQ9H2G2 1235 aaPredicted RBP12.86□□□□□ -0.35
EXOSC1-207ENST00000474309 ZSWIM6Q9HCJ5 1215 aa12.86□□□□□ -0.35
EXOSC1-207ENST00000474309 CHST7Q9NS84 486 aa12.86□□□□□ -0.35
EXOSC1-207ENST00000474309 MARCH5Q9NX47 278 aa12.86□□□□□ -0.35
EXOSC1-207ENST00000474309 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.86□□□□□ -0.35
EXOSC1-207ENST00000474309 FNIP2Q9P278 1114 aa12.86□□□□□ -0.35
EXOSC1-207ENST00000474309 VAV3Q9UKW4 847 aa12.86□□□□□ -0.35
EXOSC1-207ENST00000474309 GIT1Q9Y2X7 761 aa12.86□□□□□ -0.35
EXOSC1-207ENST00000474309 DMDP11532 3685 aa12.86□□□□□ -0.35
EXOSC1-207ENST00000474309 DOCK6Q96HP0 2047 aa12.86□□□□□ -0.35
EXOSC1-207ENST00000474309 ARL5CA6NH57 179 aa12.85□□□□□ -0.35
EXOSC1-207ENST00000474309 C2CD2LO14523 706 aa12.85□□□□□ -0.35
EXOSC1-207ENST00000474309 SLC37A4O43826 429 aa12.85□□□□□ -0.35
EXOSC1-207ENST00000474309 ERLIN2O94905 339 aa12.85□□□□□ -0.35
EXOSC1-207ENST00000474309 YWHABP31946 246 aaKnown RBP12.85□□□□□ -0.35
EXOSC1-207ENST00000474309 GBP2P32456 591 aaPredicted RBP12.85□□□□□ -0.35
EXOSC1-207ENST00000474309 OR1G1P47890 313 aa12.85□□□□□ -0.35
EXOSC1-207ENST00000474309 ID4P47928 161 aa12.85□□□□□ -0.35
EXOSC1-207ENST00000474309 GLUD2P49448 558 aa12.85□□□□□ -0.35
EXOSC1-207ENST00000474309 PTENP60484 403 aa12.85□□□□□ -0.35
EXOSC1-207ENST00000474309 PHLDB3Q6NSJ2 640 aa12.85□□□□□ -0.35
EXOSC1-207ENST00000474309 NOTUMQ6P988 496 aa12.85□□□□□ -0.35
EXOSC1-207ENST00000474309 NEK8Q86SG6 692 aa12.85□□□□□ -0.35
EXOSC1-207ENST00000474309 SKAP1Q86WV1 359 aa12.85□□□□□ -0.35
EXOSC1-207ENST00000474309 SMG7Q92540 1137 aaKnown RBP12.85□□□□□ -0.35
EXOSC1-207ENST00000474309 NT5C3AQ9H0P0 336 aa12.85□□□□□ -0.35
EXOSC1-207ENST00000474309 CSRNP2Q9H175 543 aa12.85□□□□□ -0.35
EXOSC1-207ENST00000474309 ZSWIM4Q9H7M6 989 aa12.85□□□□□ -0.35
EXOSC1-207ENST00000474309 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.85□□□□□ -0.35
EXOSC1-207ENST00000474309 MIOSQ9NXC5 875 aa12.85□□□□□ -0.35
EXOSC1-207ENST00000474309 ZDHHC7Q9NXF8 308 aa12.85□□□□□ -0.35
EXOSC1-207ENST00000474309 WRAP73Q9P2S5 460 aaPredicted RBP12.85□□□□□ -0.35
EXOSC1-207ENST00000474309 IPPQ9Y573 584 aa12.85□□□□□ -0.35
EXOSC1-207ENST00000474309 TDRD15B5MCY1 1934 aaKnown RBP12.85□□□□□ -0.35
EXOSC1-207ENST00000474309 VPS13AQ96RL7 3174 aa12.85□□□□□ -0.35
EXOSC1-207ENST00000474309 CLUHO75153 1309 aa12.85□□□□□ -0.35
EXOSC1-207ENST00000474309 KRBA1A5PL33 1030 aa12.84□□□□□ -0.35
EXOSC1-207ENST00000474309 STK25O00506 426 aa12.84□□□□□ -0.35
EXOSC1-207ENST00000474309 NARSO43776 548 aaKnown RBP12.84□□□□□ -0.35
EXOSC1-207ENST00000474309 SRFP11831 508 aa12.84□□□□□ -0.35
EXOSC1-207ENST00000474309 EMC2Q15006 297 aa12.84□□□□□ -0.35
EXOSC1-207ENST00000474309 USP41Q3LFD5 358 aa12.84□□□□□ -0.35
EXOSC1-207ENST00000474309 XKR9Q5GH70 373 aa12.84□□□□□ -0.35
EXOSC1-207ENST00000474309 LILRA6Q6PI73 481 aa12.84□□□□□ -0.35
EXOSC1-207ENST00000474309 SLFN12Q8IYM2 578 aa12.84□□□□□ -0.35
EXOSC1-207ENST00000474309 HAS1Q92839 578 aa12.84□□□□□ -0.35
EXOSC1-207ENST00000474309 ZNF707Q96C28 371 aaPredicted RBP12.84□□□□□ -0.35
EXOSC1-207ENST00000474309 GAD1Q99259 594 aa12.84□□□□□ -0.35
EXOSC1-207ENST00000474309 MTRQ99707 1265 aa12.84□□□□□ -0.35
EXOSC1-207ENST00000474309 PHF20Q9BVI0 1012 aa12.84□□□□□ -0.35
EXOSC1-207ENST00000474309 PRKD2Q9BZL6 878 aa12.84□□□□□ -0.35
EXOSC1-207ENST00000474309 TM6SF1Q9BZW5 370 aa12.84□□□□□ -0.35
EXOSC1-207ENST00000474309 PRG3Q9Y2Y8 225 aaPredicted RBP12.84□□□□□ -0.35
EXOSC1-207ENST00000474309 ZFP37Q9Y6Q3 630 aaPredicted RBP12.84□□□□□ -0.35
EXOSC1-207ENST00000474309 FANCMQ8IYD8 2048 aa12.83□□□□□ -0.36
EXOSC1-207ENST00000474309 CCDC194A0A1B0GVG4 234 aa12.83□□□□□ -0.36
EXOSC1-207ENST00000474309 ANHXE9PGG2 379 aa12.83□□□□□ -0.36
EXOSC1-207ENST00000474309 LYPLA2O95372 231 aa12.83□□□□□ -0.36
EXOSC1-207ENST00000474309 BAG4O95429 457 aaKnown RBP12.83□□□□□ -0.36
EXOSC1-207ENST00000474309 LMNAP02545 664 aaKnown RBP12.83□□□□□ -0.36
EXOSC1-207ENST00000474309 CFHP08603 1231 aa12.83□□□□□ -0.36
EXOSC1-207ENST00000474309 LAMP2P13473 410 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms