RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 BICDL1Q6ZP65 573 aa19.96■□□□□ 0.79
ECHDC1-214ENST00000474289 APBB1IPQ7Z5R6 666 aaPredicted RBP19.96■□□□□ 0.79
ECHDC1-214ENST00000474289 LONP2Q86WA8 852 aa19.96■□□□□ 0.79
ECHDC1-214ENST00000474289 DZIP1Q86YF9 867 aaKnown RBP19.96■□□□□ 0.79
ECHDC1-214ENST00000474289 SLC7A6OSQ96CW6 309 aaPredicted RBP19.96■□□□□ 0.79
ECHDC1-214ENST00000474289 POP1Q99575 1024 aaKnown RBP19.96■□□□□ 0.79
ECHDC1-214ENST00000474289 METTL14Q9HCE5 456 aaKnown RBP19.96■□□□□ 0.79
ECHDC1-214ENST00000474289 LOC102724428A0A0B4J2F2 783 aa19.95■□□□□ 0.78
ECHDC1-214ENST00000474289 PDXKO00764 312 aa19.95■□□□□ 0.78
ECHDC1-214ENST00000474289 CALUO43852 315 aaPredicted RBP19.95■□□□□ 0.78
ECHDC1-214ENST00000474289 BAG3O95817 575 aa19.95■□□□□ 0.78
ECHDC1-214ENST00000474289 SMARCA1P28370 1054 aa19.95■□□□□ 0.78
ECHDC1-214ENST00000474289 CHKAP35790 457 aa19.95■□□□□ 0.78
ECHDC1-214ENST00000474289 SSR1P43307 286 aaKnown RBP19.95■□□□□ 0.78
ECHDC1-214ENST00000474289 SIK1P57059 783 aa19.95■□□□□ 0.78
ECHDC1-214ENST00000474289 STRN3Q13033 797 aa19.95■□□□□ 0.78
ECHDC1-214ENST00000474289 LAMB3Q13751 1172 aa19.95■□□□□ 0.78
ECHDC1-214ENST00000474289 CYP1B1Q16678 543 aa19.95■□□□□ 0.78
ECHDC1-214ENST00000474289 OR52E8Q6IFG1 317 aa19.95■□□□□ 0.78
ECHDC1-214ENST00000474289 SFR1Q86XK3 245 aa19.95■□□□□ 0.78
ECHDC1-214ENST00000474289 UCMAQ8WVF2 138 aa19.95■□□□□ 0.78
ECHDC1-214ENST00000474289 LRRC37BQ96QE4 947 aa19.95■□□□□ 0.78
ECHDC1-214ENST00000474289 STK33Q9BYT3 514 aa19.95■□□□□ 0.78
ECHDC1-214ENST00000474289 GPR88Q9GZN0 384 aa19.95■□□□□ 0.78
ECHDC1-214ENST00000474289 RIOX1Q9H6W3 641 aa19.95■□□□□ 0.78
ECHDC1-214ENST00000474289 NKIRAS1Q9NYS0 192 aa19.95■□□□□ 0.78
ECHDC1-214ENST00000474289 MAST2Q6P0Q8 1798 aa19.95■□□□□ 0.78
ECHDC1-214ENST00000474289 ASTN1O14525 1302 aa19.95■□□□□ 0.78
ECHDC1-214ENST00000474289 TMEM110-MUSTN1A8MSY1 372 aa19.95■□□□□ 0.78
ECHDC1-214ENST00000474289 USP17L5A8MUK1 530 aa19.95■□□□□ 0.78
ECHDC1-214ENST00000474289 RFC4P35249 363 aa19.95■□□□□ 0.78
ECHDC1-214ENST00000474289 MUM1Q2TAK8 710 aa19.95■□□□□ 0.78
ECHDC1-214ENST00000474289 EPM2AIP1Q7L775 607 aaPredicted RBP19.95■□□□□ 0.78
ECHDC1-214ENST00000474289 RBBP8NLQ8NC74 664 aaPredicted RBP19.95■□□□□ 0.78
ECHDC1-214ENST00000474289 C7orf43Q8WVR3 580 aa19.95■□□□□ 0.78
ECHDC1-214ENST00000474289 IFT43Q96FT9 208 aa19.95■□□□□ 0.78
ECHDC1-214ENST00000474289 DENND2DQ9H6A0 471 aaPredicted RBP19.95■□□□□ 0.78
ECHDC1-214ENST00000474289 TBK1Q9UHD2 729 aa19.95■□□□□ 0.78
ECHDC1-214ENST00000474289 PCDHB13Q9Y5F0 798 aa19.95■□□□□ 0.78
ECHDC1-214ENST00000474289 GGPS1O95749 300 aa19.94■□□□□ 0.78
ECHDC1-214ENST00000474289 T-ENOLP0DO92 83 aa19.94■□□□□ 0.78
ECHDC1-214ENST00000474289 PYGMP11217 842 aa19.94■□□□□ 0.78
ECHDC1-214ENST00000474289 WASHC2DQ5SRD0 308 aa19.94■□□□□ 0.78
ECHDC1-214ENST00000474289 SEL1L2Q5TEA6 688 aa19.94■□□□□ 0.78
ECHDC1-214ENST00000474289 C11orf63Q6NUN7 778 aa19.94■□□□□ 0.78
ECHDC1-214ENST00000474289 MIGA2Q7L4E1 593 aa19.94■□□□□ 0.78
ECHDC1-214ENST00000474289 SRRM1Q8IYB3 904 aaKnown RBP19.94■□□□□ 0.78
ECHDC1-214ENST00000474289 PHC3Q8NDX5 983 aa19.94■□□□□ 0.78
ECHDC1-214ENST00000474289 MXD3Q9BW11 206 aa19.94■□□□□ 0.78
ECHDC1-214ENST00000474289 DHX36Q9H2U1 1008 aaKnown RBP19.94■□□□□ 0.78
ECHDC1-214ENST00000474289 DNAJC12Q9UKB3 198 aa19.94■□□□□ 0.78
ECHDC1-214ENST00000474289 SNED1Q8TER0 1413 aa19.94■□□□□ 0.78
ECHDC1-214ENST00000474289 ADGRA3Q8IWK6 1321 aa19.94■□□□□ 0.78
ECHDC1-214ENST00000474289 POTEFA5A3E0 1075 aa19.94■□□□□ 0.78
ECHDC1-214ENST00000474289 hCG_1984214I3L0E3 225 aa19.94■□□□□ 0.78
ECHDC1-214ENST00000474289 CLIC2O15247 247 aa19.94■□□□□ 0.78
ECHDC1-214ENST00000474289 SLC16A3O15427 465 aaKnown RBP19.94■□□□□ 0.78
ECHDC1-214ENST00000474289 RNF8O76064 485 aa19.94■□□□□ 0.78
ECHDC1-214ENST00000474289 POTEIP0CG38 1075 aa19.94■□□□□ 0.78
ECHDC1-214ENST00000474289 SPTY2D1Q68D10 685 aaPredicted RBP19.94■□□□□ 0.78
ECHDC1-214ENST00000474289 ZNF449Q6P9G9 518 aa19.94■□□□□ 0.78
ECHDC1-214ENST00000474289 POTEGQ6S5H5 508 aa19.94■□□□□ 0.78
ECHDC1-214ENST00000474289 POTEEQ6S8J3 1075 aa19.94■□□□□ 0.78
ECHDC1-214ENST00000474289 RHOT2Q8IXI1 618 aa19.94■□□□□ 0.78
ECHDC1-214ENST00000474289 ZNF713Q8N859 430 aaPredicted RBP19.94■□□□□ 0.78
ECHDC1-214ENST00000474289 ITFG2Q969R8 447 aa19.94■□□□□ 0.78
ECHDC1-214ENST00000474289 DNAJC17Q9NVM6 304 aaKnown RBP19.94■□□□□ 0.78
ECHDC1-214ENST00000474289 NMRK1Q9NWW6 199 aa19.94■□□□□ 0.78
ECHDC1-214ENST00000474289 CTTNBP2NLQ9P2B4 639 aa19.94■□□□□ 0.78
ECHDC1-214ENST00000474289 SAP30BPQ9UHR5 308 aaKnown RBP19.94■□□□□ 0.78
ECHDC1-214ENST00000474289 FRMPD2Q68DX3 1309 aaPredicted RBP19.93■□□□□ 0.78
ECHDC1-214ENST00000474289 MED24O75448 989 aa19.93■□□□□ 0.78
ECHDC1-214ENST00000474289 TTC4O95801 387 aa19.93■□□□□ 0.78
ECHDC1-214ENST00000474289 CETPP11597 493 aa19.93■□□□□ 0.78
ECHDC1-214ENST00000474289 TNFAIP3P21580 790 aa19.93■□□□□ 0.78
ECHDC1-214ENST00000474289 HSPA2P54652 639 aa19.93■□□□□ 0.78
ECHDC1-214ENST00000474289 GIT2Q14161 759 aa19.93■□□□□ 0.78
ECHDC1-214ENST00000474289 SIX1Q15475 284 aaPredicted RBP19.93■□□□□ 0.78
ECHDC1-214ENST00000474289 KYNUQ16719 465 aa19.93■□□□□ 0.78
ECHDC1-214ENST00000474289 IRGCQ6NXR0 463 aa19.93■□□□□ 0.78
ECHDC1-214ENST00000474289 SMIM5Q71RC9 77 aa19.93■□□□□ 0.78
ECHDC1-214ENST00000474289 KIFAP3Q92845 792 aa19.93■□□□□ 0.78
ECHDC1-214ENST00000474289 ZNF333Q96JL9 665 aa19.93■□□□□ 0.78
ECHDC1-214ENST00000474289 EYA3Q99504 573 aa19.93■□□□□ 0.78
ECHDC1-214ENST00000474289 TRIM4Q9C037 500 aa19.93■□□□□ 0.78
ECHDC1-214ENST00000474289 VCXQ9H320 206 aa19.93■□□□□ 0.78
ECHDC1-214ENST00000474289 TYW1Q9NV66 732 aaKnown RBP19.93■□□□□ 0.78
ECHDC1-214ENST00000474289 RGL1Q9NZL6 768 aa19.93■□□□□ 0.78
ECHDC1-214ENST00000474289 USP20Q9Y2K6 914 aa19.93■□□□□ 0.78
ECHDC1-214ENST00000474289 USH1CQ9Y6N9 552 aa19.93■□□□□ 0.78
ECHDC1-214ENST00000474289 A0A1B0GVG6 124 aa19.93■□□□□ 0.78
ECHDC1-214ENST00000474289 ECEL1O95672 775 aa19.93■□□□□ 0.78
ECHDC1-214ENST00000474289 HADHBP55084 474 aaKnown RBP19.93■□□□□ 0.78
ECHDC1-214ENST00000474289 TBC1D25Q3MII6 688 aa19.93■□□□□ 0.78
ECHDC1-214ENST00000474289 PPP1R21Q6ZMI0 780 aa19.93■□□□□ 0.78
ECHDC1-214ENST00000474289 TGFBRAP1Q8WUH2 860 aa19.93■□□□□ 0.78
ECHDC1-214ENST00000474289 EPAS1Q99814 870 aa19.93■□□□□ 0.78
ECHDC1-214ENST00000474289 ZCWPW1Q9H0M4 648 aa19.93■□□□□ 0.78
ECHDC1-214ENST00000474289 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.93■□□□□ 0.78
ECHDC1-214ENST00000474289 STARD13Q9Y3M8 1113 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms