RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 CCSAPQ6IQ19 270 aaPredicted RBP11.21□□□□□ -0.61
PRPF38A-202ENST00000474048 GDF6Q6KF10 455 aaPredicted RBP11.21□□□□□ -0.61
PRPF38A-202ENST00000474048 RUFY4Q6ZNE9 571 aa11.21□□□□□ -0.61
PRPF38A-202ENST00000474048 INTS8Q75QN2 995 aaKnown RBP11.21□□□□□ -0.61
PRPF38A-202ENST00000474048 FRMD5Q7Z6J6 570 aa11.21□□□□□ -0.61
PRPF38A-202ENST00000474048 SLC9A9Q8IVB4 645 aa11.21□□□□□ -0.61
PRPF38A-202ENST00000474048 C12orf56Q8IXR9 622 aa11.21□□□□□ -0.61
PRPF38A-202ENST00000474048 GPD1LQ8N335 351 aa11.21□□□□□ -0.61
PRPF38A-202ENST00000474048 LINC01465Q8N7H1 131 aa11.21□□□□□ -0.61
PRPF38A-202ENST00000474048 U2AF1L4Q8WU68 220 aaKnown RBP11.21□□□□□ -0.61
PRPF38A-202ENST00000474048 MRFAP1L1Q96HT8 127 aa11.21□□□□□ -0.61
PRPF38A-202ENST00000474048 ZNF333Q96JL9 665 aa11.21□□□□□ -0.61
PRPF38A-202ENST00000474048 OSMRQ99650 979 aa11.21□□□□□ -0.61
PRPF38A-202ENST00000474048 STRA6Q9BX79 667 aa11.21□□□□□ -0.61
PRPF38A-202ENST00000474048 TRIM6Q9C030 488 aaPredicted RBP11.21□□□□□ -0.61
PRPF38A-202ENST00000474048 XPO4Q9C0E2 1151 aaKnown RBP11.21□□□□□ -0.61
PRPF38A-202ENST00000474048 AGO2Q9UKV8 859 aaKnown RBP11.21□□□□□ -0.61
PRPF38A-202ENST00000474048 OGDHLQ9ULD0 1010 aa11.21□□□□□ -0.61
PRPF38A-202ENST00000474048 CNTNAP2Q9UHC6 1331 aa11.2□□□□□ -0.62
PRPF38A-202ENST00000474048 TRIP12Q14669 1992 aaPredicted RBP11.2□□□□□ -0.62
PRPF38A-202ENST00000474048 ZNF233A6NK53 670 aa11.2□□□□□ -0.62
PRPF38A-202ENST00000474048 ARVCFO00192 962 aa11.2□□□□□ -0.62
PRPF38A-202ENST00000474048 TGFB1I1O43294 461 aa11.2□□□□□ -0.62
PRPF38A-202ENST00000474048 N4BP1O75113 896 aaKnown RBP11.2□□□□□ -0.62
PRPF38A-202ENST00000474048 CAND2O75155 1236 aa11.2□□□□□ -0.62
PRPF38A-202ENST00000474048 SGPL1O95470 568 aa11.2□□□□□ -0.62
PRPF38A-202ENST00000474048 PIGRP01833 764 aa11.2□□□□□ -0.62
PRPF38A-202ENST00000474048 CTSHP09668 335 aa11.2□□□□□ -0.62
PRPF38A-202ENST00000474048 CDC25BP30305 580 aa11.2□□□□□ -0.62
PRPF38A-202ENST00000474048 AXLP30530 894 aa11.2□□□□□ -0.62
PRPF38A-202ENST00000474048 DEKP35659 375 aaKnown RBP11.2□□□□□ -0.62
PRPF38A-202ENST00000474048 ZNF200P98182 395 aaPredicted RBP11.2□□□□□ -0.62
PRPF38A-202ENST00000474048 MBTD1Q05BQ5 628 aa11.2□□□□□ -0.62
PRPF38A-202ENST00000474048 BFSP2Q13515 415 aa11.2□□□□□ -0.62
PRPF38A-202ENST00000474048 FAM187BQ17R55 369 aa11.2□□□□□ -0.62
PRPF38A-202ENST00000474048 DCAF4L1Q3SXM0 396 aa11.2□□□□□ -0.62
PRPF38A-202ENST00000474048 NOTUMQ6P988 496 aa11.2□□□□□ -0.62
PRPF38A-202ENST00000474048 MPZL3Q6UWV2 235 aa11.2□□□□□ -0.62
PRPF38A-202ENST00000474048 LRRC55Q6ZSA7 311 aa11.2□□□□□ -0.62
PRPF38A-202ENST00000474048 ZBTB33Q86T24 672 aa11.2□□□□□ -0.62
PRPF38A-202ENST00000474048 SERINC5Q86VE9 423 aa11.2□□□□□ -0.62
PRPF38A-202ENST00000474048 PPFIBP1Q86W92 1011 aa11.2□□□□□ -0.62
PRPF38A-202ENST00000474048 IFNLR1Q8IU57 520 aaPredicted RBP11.2□□□□□ -0.62
PRPF38A-202ENST00000474048 HACE1Q8IYU2 909 aa11.2□□□□□ -0.62
PRPF38A-202ENST00000474048 ANKLE1Q8NAG6 615 aa11.2□□□□□ -0.62
PRPF38A-202ENST00000474048 RDH13Q8NBN7 331 aa11.2□□□□□ -0.62
PRPF38A-202ENST00000474048 KCNN1Q92952 543 aa11.2□□□□□ -0.62
PRPF38A-202ENST00000474048 ARMC5Q96C12 935 aa11.2□□□□□ -0.62
PRPF38A-202ENST00000474048 SAAL1Q96ER3 474 aa11.2□□□□□ -0.62
PRPF38A-202ENST00000474048 FNBP1Q96RU3 617 aa11.2□□□□□ -0.62
PRPF38A-202ENST00000474048 CBWD1Q9BRT8 395 aa11.2□□□□□ -0.62
PRPF38A-202ENST00000474048 TARS2Q9BW92 718 aaKnown RBP11.2□□□□□ -0.62
PRPF38A-202ENST00000474048 CELF4Q9BZC1 486 aaKnown RBP11.2□□□□□ -0.62
PRPF38A-202ENST00000474048 SENP6Q9GZR1 1112 aaPredicted RBP11.2□□□□□ -0.62
PRPF38A-202ENST00000474048 LGALS16A8MUM7 142 aa11.19□□□□□ -0.62
PRPF38A-202ENST00000474048 DCDC2CA8MYV0 355 aa11.19□□□□□ -0.62
PRPF38A-202ENST00000474048 MAPK13O15264 365 aa11.19□□□□□ -0.62
PRPF38A-202ENST00000474048 EXTL3O43909 919 aa11.19□□□□□ -0.62
PRPF38A-202ENST00000474048 RPS6KA5O75582 802 aa11.19□□□□□ -0.62
PRPF38A-202ENST00000474048 DARSP14868 501 aaKnown RBP11.19□□□□□ -0.62
PRPF38A-202ENST00000474048 EIF4BP23588 611 aaKnown RBP11.19□□□□□ -0.62
PRPF38A-202ENST00000474048 HOXC8P31273 242 aa11.19□□□□□ -0.62
PRPF38A-202ENST00000474048 HOXD13P35453 343 aa11.19□□□□□ -0.62
PRPF38A-202ENST00000474048 ADAM17P78536 824 aa11.19□□□□□ -0.62
PRPF38A-202ENST00000474048 TRIM14Q14142 442 aa11.19□□□□□ -0.62
PRPF38A-202ENST00000474048 SURF1Q15526 300 aa11.19□□□□□ -0.62
PRPF38A-202ENST00000474048 SNRNP35Q16560 246 aaKnown RBP11.19□□□□□ -0.62
PRPF38A-202ENST00000474048 VWA3BQ502W6 1294 aa11.19□□□□□ -0.62
PRPF38A-202ENST00000474048 TMC6Q7Z403 805 aa11.19□□□□□ -0.62
PRPF38A-202ENST00000474048 SPC24Q8NBT2 197 aa11.19□□□□□ -0.62
PRPF38A-202ENST00000474048 ACO2Q99798 780 aaKnown RBP11.19□□□□□ -0.62
PRPF38A-202ENST00000474048 FAM213AQ9BRX8 229 aa11.19□□□□□ -0.62
PRPF38A-202ENST00000474048 CCDC113Q9H0I3 377 aa11.19□□□□□ -0.62
PRPF38A-202ENST00000474048 NDST4Q9H3R1 872 aa11.19□□□□□ -0.62
PRPF38A-202ENST00000474048 FZD8Q9H461 694 aa11.19□□□□□ -0.62
PRPF38A-202ENST00000474048 IFT122Q9HBG6 1241 aa11.19□□□□□ -0.62
PRPF38A-202ENST00000474048 PRDM10Q9NQV6 1147 aa11.19□□□□□ -0.62
PRPF38A-202ENST00000474048 PIN4Q9Y237 131 aaKnown RBP11.19□□□□□ -0.62
PRPF38A-202ENST00000474048 TNFSF13BQ9Y275 285 aa11.19□□□□□ -0.62
PRPF38A-202ENST00000474048 R3HCC1Q9Y3T6 440 aaKnown RBP11.19□□□□□ -0.62
PRPF38A-202ENST00000474048 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.19□□□□□ -0.622e-7■■□□□ 14.1
PRPF38A-202ENST00000474048 CDY2AQ9Y6F7 541 aa11.19□□□□□ -0.62
PRPF38A-202ENST00000474048 A0A1B0GTH6 734 aa11.18□□□□□ -0.62
PRPF38A-202ENST00000474048 GOLGA8IPA6NC78 632 aa11.18□□□□□ -0.62
PRPF38A-202ENST00000474048 GOLGA8JA6NMD2 632 aa11.18□□□□□ -0.62
PRPF38A-202ENST00000474048 ANKRD63C9JTQ0 380 aa11.18□□□□□ -0.62
PRPF38A-202ENST00000474048 GPR182O15218 404 aa11.18□□□□□ -0.62
PRPF38A-202ENST00000474048 OGTO15294 1046 aa11.18□□□□□ -0.62
PRPF38A-202ENST00000474048 AKAP3O75969 853 aa11.18□□□□□ -0.62
PRPF38A-202ENST00000474048 AFPP02771 609 aaKnown RBP11.18□□□□□ -0.62
PRPF38A-202ENST00000474048 ZSCAN20P17040 1043 aaPredicted RBP11.18□□□□□ -0.62
PRPF38A-202ENST00000474048 VAMP7P51809 220 aa11.18□□□□□ -0.62
PRPF38A-202ENST00000474048 YARSP54577 528 aaKnown RBP11.18□□□□□ -0.62
PRPF38A-202ENST00000474048 MARSP56192 900 aaKnown RBP11.18□□□□□ -0.62
PRPF38A-202ENST00000474048 BFSP1Q12934 665 aa11.18□□□□□ -0.62
PRPF38A-202ENST00000474048 PAK2Q13177 524 aa11.18□□□□□ -0.62
PRPF38A-202ENST00000474048 SNX17Q15036 470 aa11.18□□□□□ -0.62
PRPF38A-202ENST00000474048 TSR1Q2NL82 804 aaKnown RBP11.18□□□□□ -0.62
PRPF38A-202ENST00000474048 SPECC1LQ69YQ0 1117 aa11.18□□□□□ -0.62
PRPF38A-202ENST00000474048 TSHZ1Q6ZSZ6 1077 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms