RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 LARSQ9P2J5 1176 aaKnown RBP8.37□□□□□ -1.07
CCDC93-207ENST00000474006 KCNG1Q9UIX4 513 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 AKT3Q9Y243 479 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 CENPFP49454 3210 aa8.37□□□□□ -1.07
CCDC93-207ENST00000474006 CARNS1A5YM72 827 aa8.36□□□□□ -1.07
CCDC93-207ENST00000474006 B4GALT4O60513 344 aa8.36□□□□□ -1.07
CCDC93-207ENST00000474006 VTNP04004 478 aa8.36□□□□□ -1.07
CCDC93-207ENST00000474006 NMT1P30419 496 aaKnown RBP8.36□□□□□ -1.07
CCDC93-207ENST00000474006 NLRP11P59045 1033 aaKnown RBP8.36□□□□□ -1.07
CCDC93-207ENST00000474006 NLRP12P59046 1061 aa8.36□□□□□ -1.07
CCDC93-207ENST00000474006 CLDN10P78369 228 aa8.36□□□□□ -1.07
CCDC93-207ENST00000474006 CDC42EP1Q00587 391 aa8.36□□□□□ -1.07
CCDC93-207ENST00000474006 TMEM62Q0P6H9 643 aa8.36□□□□□ -1.07
CCDC93-207ENST00000474006 ZNF658Q5TYW1 1059 aaPredicted RBP8.36□□□□□ -1.07
CCDC93-207ENST00000474006 TAF2Q6P1X5 1199 aa8.36□□□□□ -1.07
CCDC93-207ENST00000474006 SERINC5Q86VE9 423 aa8.36□□□□□ -1.07
CCDC93-207ENST00000474006 SFR1Q86XK3 245 aa8.36□□□□□ -1.07
CCDC93-207ENST00000474006 FAM178BQ8IXR5 827 aa8.36□□□□□ -1.07
CCDC93-207ENST00000474006 ZNF668Q96K58 619 aaPredicted RBP8.36□□□□□ -1.07
CCDC93-207ENST00000474006 KCTD15Q96SI1 283 aaPredicted RBP8.36□□□□□ -1.07
CCDC93-207ENST00000474006 MRPL44Q9H9J2 332 aaKnown RBP8.36□□□□□ -1.07
CCDC93-207ENST00000474006 KMT5AQ9NQR1 393 aa8.36□□□□□ -1.07
CCDC93-207ENST00000474006 DNAAF2Q9NVR5 837 aaKnown RBP8.36□□□□□ -1.07
CCDC93-207ENST00000474006 SEL1LQ9UBV2 794 aa8.36□□□□□ -1.07
CCDC93-207ENST00000474006 MCM3APO60318 1980 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 KIAA1217Q5T5P2 1943 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 DCDC2CA8MYV0 355 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 SLC16A4O15374 487 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 PQBP1O60828 265 aaKnown RBP8.35□□□□□ -1.07
CCDC93-207ENST00000474006 GPR32O75388 356 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 CD4P01730 458 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 MAPTP10636 758 aaKnown RBP8.35□□□□□ -1.07
CCDC93-207ENST00000474006 THPOP40225 353 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 NAMPTP43490 491 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 TLE2Q04725 743 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 POU5F1BQ06416 359 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 TYRO3Q06418 890 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 DMP1Q13316 513 aaPredicted RBP8.35□□□□□ -1.07
CCDC93-207ENST00000474006 TFDP1Q14186 410 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 PPP2R5AQ15172 486 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 KIZQ2M2Z5 673 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 ZC2HC1CQ53FD0 456 aaPredicted RBP8.35□□□□□ -1.07
CCDC93-207ENST00000474006 OXLD1Q5BKU9 147 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 FAM26FQ5R3K3 315 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 C1orf53Q5VUE5 145 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 ANKRD33Q7Z3H0 272 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 HAUS6Q7Z4H7 955 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 RPAINQ86UA6 219 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 RSPH3Q86UC2 560 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 SMYD4Q8IYR2 804 aaPredicted RBP8.35□□□□□ -1.07
CCDC93-207ENST00000474006 SIX5Q8N196 739 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 TRIML1Q8N9V2 468 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 RNF149Q8NC42 400 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 SLC17A8Q8NDX2 589 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 TMEM161BQ8NDZ6 487 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 GLIS3Q8NEA6 775 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 FAM200AQ8TCP9 573 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 WNT8BQ93098 351 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 ABHD8Q96I13 439 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 NLRP4Q96MN2 994 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 FIZ1Q96SL8 496 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 MAP7D2Q96T17 732 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 PPP1R16BQ96T49 567 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 ANP32EQ9BTT0 268 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 KIFC3Q9BVG8 833 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 STRA6Q9BX79 667 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 FGFBP2Q9BYJ0 223 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 GTPBP4Q9BZE4 634 aaKnown RBP8.35□□□□□ -1.07
CCDC93-207ENST00000474006 ADAMTS10Q9H324 1103 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 OLFML3Q9NRN5 406 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 MAPK8IP1Q9UQF2 711 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 GDAQ9Y2T3 454 aa8.35□□□□□ -1.07
CCDC93-207ENST00000474006 A0A087WZ62 844 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 DENND3A2RUS2 1198 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 LRRIQ4A6NIV6 560 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 CCDC85CA6NKD9 419 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 K7ERI5 159 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 CSDE1O75534 798 aaKnown RBP8.34□□□□□ -1.07
CCDC93-207ENST00000474006 PRPF6O94906 941 aaKnown RBP8.34□□□□□ -1.07
CCDC93-207ENST00000474006 GCNT3O95395 438 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 CHRNA1P02708 482 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 CCDC192P0DO97 292 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 MYBP10242 640 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 PRCPP42785 496 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 GPC3P51654 580 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 CASP5P51878 434 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 NCKAP1LP55160 1127 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 PTENP60484 403 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 GTF2BQ00403 316 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 FAAP100Q0VG06 881 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 USP4Q13107 963 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 CAPSQ13938 189 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 SNX17Q15036 470 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 SWI5Q1ZZU3 235 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 LRRC26Q2I0M4 334 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 TRIM71Q2Q1W2 868 aaKnown RBP8.34□□□□□ -1.07
CCDC93-207ENST00000474006 TRIM60Q495X7 471 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 EPM2AIP1Q7L775 607 aaPredicted RBP8.34□□□□□ -1.07
CCDC93-207ENST00000474006 UBE2Q1Q7Z7E8 422 aa8.34□□□□□ -1.07
CCDC93-207ENST00000474006 FAM126BQ8IXS8 530 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms