RNA–Protein interactions for RNA: ENST00000473911.1

CLIC3-201, Transcript of chloride intracellular channel 3, humanhuman

TSL 5

Gene CLIC3, Length 732 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-201ENST00000473911 DNAJB4Q9UDY4 337 aa17.27■□□□□ 0.36
CLIC3-201ENST00000473911 LRWD1Q9UFC0 647 aa17.27■□□□□ 0.36
CLIC3-201ENST00000473911 IPPQ9Y573 584 aa17.27■□□□□ 0.36
CLIC3-201ENST00000473911 CXCL14O95715 111 aa17.26■□□□□ 0.35
CLIC3-201ENST00000473911 POMCP01189 267 aa17.26■□□□□ 0.35
CLIC3-201ENST00000473911 GALTP07902 379 aa17.26■□□□□ 0.35
CLIC3-201ENST00000473911 SLC11A1P49279 550 aa17.26■□□□□ 0.35
CLIC3-201ENST00000473911 FXR2P51116 673 aaKnown RBP eCLIP17.26■□□□□ 0.35
CLIC3-201ENST00000473911 KCNC3Q14003 757 aa17.26■□□□□ 0.35
CLIC3-201ENST00000473911 PADI6Q6TGC4 694 aa17.26■□□□□ 0.35
CLIC3-201ENST00000473911 TMEM173Q86WV6 379 aaPredicted RBP17.26■□□□□ 0.35
CLIC3-201ENST00000473911 ZNF280BQ86YH2 543 aa17.26■□□□□ 0.35
CLIC3-201ENST00000473911 ZBTB8OSQ8IWT0 167 aa17.26■□□□□ 0.35
CLIC3-201ENST00000473911 HACE1Q8IYU2 909 aa17.26■□□□□ 0.35
CLIC3-201ENST00000473911 C4orf32Q8N8J7 132 aa17.26■□□□□ 0.35
CLIC3-201ENST00000473911 MRPL43Q8N983 215 aaKnown RBP17.26■□□□□ 0.35
CLIC3-201ENST00000473911 SMG8Q8ND04 991 aaKnown RBP17.26■□□□□ 0.35
CLIC3-201ENST00000473911 SUSD6Q92537 303 aa17.26■□□□□ 0.35
CLIC3-201ENST00000473911 IGSF21Q96ID5 467 aa17.26■□□□□ 0.35
CLIC3-201ENST00000473911 RPGRIP1Q96KN7 1286 aa17.26■□□□□ 0.35
CLIC3-201ENST00000473911 MFSD14AQ96MC6 490 aa17.26■□□□□ 0.35
CLIC3-201ENST00000473911 APOL6Q9BWW8 343 aa17.26■□□□□ 0.35
CLIC3-201ENST00000473911 CSRNP2Q9H175 543 aa17.26■□□□□ 0.35
CLIC3-201ENST00000473911 KCNH6Q9H252 994 aa17.26■□□□□ 0.35
CLIC3-201ENST00000473911 PCDHB6Q9Y5E3 794 aa17.26■□□□□ 0.35
CLIC3-201ENST00000473911 CFAP54Q96N23 3096 aa17.26■□□□□ 0.35
CLIC3-201ENST00000473911 DMDP11532 3685 aa17.25■□□□□ 0.35
CLIC3-201ENST00000473911 MYO15AQ9UKN7 3530 aa17.25■□□□□ 0.35
CLIC3-201ENST00000473911 KMT2EQ8IZD2 1858 aa17.25■□□□□ 0.35
CLIC3-201ENST00000473911 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.25■□□□□ 0.35
CLIC3-201ENST00000473911 C2orf71A6NGG8 1288 aa17.25■□□□□ 0.35
CLIC3-201ENST00000473911 H3BQV1 296 aa17.25■□□□□ 0.35
CLIC3-201ENST00000473911 B4GALT5O43286 388 aa17.25■□□□□ 0.35
CLIC3-201ENST00000473911 ARF4P18085 180 aaPredicted RBP17.25■□□□□ 0.35
CLIC3-201ENST00000473911 MUTP22033 750 aa17.25■□□□□ 0.35
CLIC3-201ENST00000473911 PTGDRQ13258 359 aa17.25■□□□□ 0.35
CLIC3-201ENST00000473911 AMHR2Q16671 573 aa17.25■□□□□ 0.35
CLIC3-201ENST00000473911 TMEM132AQ24JP5 1023 aa17.25■□□□□ 0.35
CLIC3-201ENST00000473911 SYCE2Q6PIF2 218 aa17.25■□□□□ 0.35
CLIC3-201ENST00000473911 DDX53Q86TM3 631 aaKnown RBP17.25■□□□□ 0.35
CLIC3-201ENST00000473911 PBXIP1Q96AQ6 731 aa17.25■□□□□ 0.35
CLIC3-201ENST00000473911 S1PR5Q9H228 398 aa17.25■□□□□ 0.35
CLIC3-201ENST00000473911 HES2Q9Y543 173 aa17.25■□□□□ 0.35
CLIC3-201ENST00000473911 STK24Q9Y6E0 443 aa17.25■□□□□ 0.35
CLIC3-201ENST00000473911 DDHD2O94830 711 aa17.24■□□□□ 0.35
CLIC3-201ENST00000473911 ALDH2P05091 517 aa17.24■□□□□ 0.35
CLIC3-201ENST00000473911 CYP11B2P19099 503 aa17.24■□□□□ 0.35
CLIC3-201ENST00000473911 SP100P23497 879 aaPredicted RBP17.24■□□□□ 0.35
CLIC3-201ENST00000473911 MCM2P49736 904 aa17.24■□□□□ 0.35
CLIC3-201ENST00000473911 TOB1P50616 345 aaPredicted RBP17.24■□□□□ 0.35
CLIC3-201ENST00000473911 AFF1P51825 1210 aaKnown RBP17.24■□□□□ 0.35
CLIC3-201ENST00000473911 ANKRD54Q6NXT1 300 aa17.24■□□□□ 0.35
CLIC3-201ENST00000473911 SLC27A1Q6PCB7 646 aa17.24■□□□□ 0.35
CLIC3-201ENST00000473911 TMEM184AQ6ZMB5 413 aa17.24■□□□□ 0.35
CLIC3-201ENST00000473911 BMP8AQ7Z5Y6 402 aa17.24■□□□□ 0.35
CLIC3-201ENST00000473911 SNX29Q8TEQ0 813 aa17.24■□□□□ 0.35
CLIC3-201ENST00000473911 BCL7CQ8WUZ0 217 aaPredicted RBP17.24■□□□□ 0.35
CLIC3-201ENST00000473911 AUTS2Q8WXX7 1259 aa17.24■□□□□ 0.35
CLIC3-201ENST00000473911 CASP10Q92851 521 aa17.24■□□□□ 0.35
CLIC3-201ENST00000473911 TMEM175Q9BSA9 504 aa17.24■□□□□ 0.35
CLIC3-201ENST00000473911 PHF7Q9BWX1 381 aaPredicted RBP17.24■□□□□ 0.35
CLIC3-201ENST00000473911 ZBP1Q9H171 429 aa17.24■□□□□ 0.35
CLIC3-201ENST00000473911 C2orf40Q9H1Z8 148 aa17.24■□□□□ 0.35
CLIC3-201ENST00000473911 PRMT7Q9NVM4 692 aaPredicted RBP17.24■□□□□ 0.35
CLIC3-201ENST00000473911 KIAA1024Q9UPX6 916 aa17.24■□□□□ 0.35
CLIC3-201ENST00000473911 FAN1Q9Y2M0 1017 aa17.24■□□□□ 0.35
CLIC3-201ENST00000473911 ARL5CA6NH57 179 aa17.23■□□□□ 0.35
CLIC3-201ENST00000473911 LAD1O00515 517 aa17.23■□□□□ 0.35
CLIC3-201ENST00000473911 B4GALT3O60512 393 aa17.23■□□□□ 0.35
CLIC3-201ENST00000473911 CD2BP2O95400 341 aaKnown RBP17.23■□□□□ 0.35
CLIC3-201ENST00000473911 NPTXRO95502 500 aa17.23■□□□□ 0.35
CLIC3-201ENST00000473911 LIG1P18858 919 aa17.23■□□□□ 0.35
CLIC3-201ENST00000473911 GJB2P29033 226 aa17.23■□□□□ 0.35
CLIC3-201ENST00000473911 MLH1P40692 756 aa17.23■□□□□ 0.35
CLIC3-201ENST00000473911 VCPP55072 806 aaKnown RBP17.23■□□□□ 0.35
CLIC3-201ENST00000473911 TCF15Q12870 199 aa17.23■□□□□ 0.35
CLIC3-201ENST00000473911 PDIA5Q14554 519 aa17.23■□□□□ 0.35
CLIC3-201ENST00000473911 CDR2LQ86X02 465 aaPredicted RBP17.23■□□□□ 0.35
CLIC3-201ENST00000473911 DEPTORQ8TB45 409 aa17.23■□□□□ 0.35
CLIC3-201ENST00000473911 FEZF2Q8TBJ5 459 aa17.23■□□□□ 0.35
CLIC3-201ENST00000473911 GAD1Q99259 594 aa17.23■□□□□ 0.35
CLIC3-201ENST00000473911 BHMT2Q9H2M3 363 aa17.23■□□□□ 0.35
CLIC3-201ENST00000473911 RNF39Q9H2S5 420 aa17.23■□□□□ 0.35
CLIC3-201ENST00000473911 NXF3Q9H4D5 531 aaKnown RBP17.23■□□□□ 0.35
CLIC3-201ENST00000473911 STK39Q9UEW8 545 aa17.23■□□□□ 0.35
CLIC3-201ENST00000473911 SMC3Q9UQE7 1217 aa17.23■□□□□ 0.35
CLIC3-201ENST00000473911 ZFHX2Q9C0A1 2572 aaPredicted RBP17.23■□□□□ 0.35
CLIC3-201ENST00000473911 MYO10Q9HD67 2058 aa17.22■□□□□ 0.35
CLIC3-201ENST00000473911 CACNA1HO95180 2353 aa17.22■□□□□ 0.35
CLIC3-201ENST00000473911 ARID2Q68CP9 1835 aa17.22■□□□□ 0.35
CLIC3-201ENST00000473911 NRP1O14786 923 aa17.22■□□□□ 0.35
CLIC3-201ENST00000473911 CLASP2O75122 1294 aaKnown RBP17.22■□□□□ 0.35
CLIC3-201ENST00000473911 CTSAP10619 480 aa17.22■□□□□ 0.35
CLIC3-201ENST00000473911 HOXB8P17481 243 aaPredicted RBP17.22■□□□□ 0.35
CLIC3-201ENST00000473911 OR1G1P47890 313 aa17.22■□□□□ 0.35
CLIC3-201ENST00000473911 GIT2Q14161 759 aa17.22■□□□□ 0.35
CLIC3-201ENST00000473911 PPP2R5AQ15172 486 aa17.22■□□□□ 0.35
CLIC3-201ENST00000473911 ECM1Q16610 540 aa17.22■□□□□ 0.35
CLIC3-201ENST00000473911 TPRNQ4KMQ1 711 aa17.22■□□□□ 0.35
CLIC3-201ENST00000473911 RILPL1Q5EBL4 403 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms