RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 TRAIPQ9BWF2 469 aa7.76□□□□□ -1.17
CKS1B-205ENST00000473344 UNC45AQ9H3U1 944 aa7.76□□□□□ -1.17
CKS1B-205ENST00000473344 NRDE2Q9H7Z3 1164 aa7.76□□□□□ -1.17
CKS1B-205ENST00000473344 MRPL17Q9NRX2 175 aaKnown RBP7.76□□□□□ -1.17
CKS1B-205ENST00000473344 FAM217BQ9NTX9 383 aaPredicted RBP7.76□□□□□ -1.17
CKS1B-205ENST00000473344 TBC1D13Q9NVG8 400 aa7.76□□□□□ -1.17
CKS1B-205ENST00000473344 SUCLA2Q9P2R7 463 aaPredicted RBP7.76□□□□□ -1.17
CKS1B-205ENST00000473344 DNAH14Q0VDD8 3507 aa7.75□□□□□ -1.17
CKS1B-205ENST00000473344 DDX11L8A8MPP1 907 aa7.75□□□□□ -1.17
CKS1B-205ENST00000473344 C2CD2LO14523 706 aa7.75□□□□□ -1.17
CKS1B-205ENST00000473344 ADAMTS3O15072 1205 aa7.75□□□□□ -1.17
CKS1B-205ENST00000473344 RNF40O75150 1001 aa7.75□□□□□ -1.17
CKS1B-205ENST00000473344 OFD1O75665 1012 aa7.75□□□□□ -1.17
CKS1B-205ENST00000473344 URODP06132 367 aa7.75□□□□□ -1.17
CKS1B-205ENST00000473344 PTMSP20962 102 aa7.75□□□□□ -1.17
CKS1B-205ENST00000473344 ID4P47928 161 aa7.75□□□□□ -1.17
CKS1B-205ENST00000473344 SLC11A1P49279 550 aa7.75□□□□□ -1.17
CKS1B-205ENST00000473344 CLCN4P51793 760 aa7.75□□□□□ -1.17
CKS1B-205ENST00000473344 AK2P54819 239 aa7.75□□□□□ -1.17
CKS1B-205ENST00000473344 NLRP5P59047 1200 aa7.75□□□□□ -1.17
CKS1B-205ENST00000473344 NONOQ15233 471 aaKnown RBP eCLIP7.75□□□□□ -1.17
CKS1B-205ENST00000473344 ANGPT1Q15389 498 aa7.75□□□□□ -1.17
CKS1B-205ENST00000473344 TARBP2Q15633 366 aaKnown RBP7.75□□□□□ -1.17
CKS1B-205ENST00000473344 PTPN14Q15678 1187 aa7.75□□□□□ -1.17
CKS1B-205ENST00000473344 TSGA10IPQ3SY00 556 aa7.75□□□□□ -1.17
CKS1B-205ENST00000473344 C15orf39Q6ZRI6 1047 aa7.75□□□□□ -1.17
CKS1B-205ENST00000473344 ERMP1Q7Z2K6 904 aa7.75□□□□□ -1.17
CKS1B-205ENST00000473344 RDM1Q8NG50 284 aa7.75□□□□□ -1.17
CKS1B-205ENST00000473344 SLC22A17Q8WUG5 538 aa7.75□□□□□ -1.17
CKS1B-205ENST00000473344 SLC7A3Q8WY07 619 aa7.75□□□□□ -1.17
CKS1B-205ENST00000473344 STAMQ92783 540 aa7.75□□□□□ -1.17
CKS1B-205ENST00000473344 SLC5A5Q92911 643 aa7.75□□□□□ -1.17
CKS1B-205ENST00000473344 NAP1L5Q96NT1 182 aaPredicted RBP7.75□□□□□ -1.17
CKS1B-205ENST00000473344 SH2D3AQ9BRG2 576 aa7.75□□□□□ -1.17
CKS1B-205ENST00000473344 SLC26A6Q9BXS9 759 aa7.75□□□□□ -1.17
CKS1B-205ENST00000473344 RNF26Q9BY78 433 aaPredicted RBP7.75□□□□□ -1.17
CKS1B-205ENST00000473344 NIFKQ9BYG3 293 aaKnown RBP7.75□□□□□ -1.17
CKS1B-205ENST00000473344 C22orf23Q9BZE7 217 aa7.75□□□□□ -1.17
CKS1B-205ENST00000473344 KCNK12Q9HB15 430 aa7.75□□□□□ -1.17
CKS1B-205ENST00000473344 VPS54Q9P1Q0 977 aa7.75□□□□□ -1.17
CKS1B-205ENST00000473344 IGSF9Q9P2J2 1179 aa7.75□□□□□ -1.17
CKS1B-205ENST00000473344 KANSL3Q9P2N6 904 aa7.75□□□□□ -1.17
CKS1B-205ENST00000473344 DNAJB4Q9UDY4 337 aa7.75□□□□□ -1.17
CKS1B-205ENST00000473344 DUSP12Q9UNI6 340 aa7.75□□□□□ -1.17
CKS1B-205ENST00000473344 SSX2IPQ9Y2D8 614 aa7.75□□□□□ -1.17
CKS1B-205ENST00000473344 FAN1Q9Y2M0 1017 aa7.75□□□□□ -1.17
CKS1B-205ENST00000473344 PCDHB2Q9Y5E7 798 aa7.75□□□□□ -1.17
CKS1B-205ENST00000473344 WDR87Q6ZQQ6 2873 aa7.74□□□□□ -1.17
CKS1B-205ENST00000473344 LOXHD1Q8IVV2 1947 aa7.74□□□□□ -1.17
CKS1B-205ENST00000473344 TMEM150BA6NC51 233 aa7.74□□□□□ -1.17
CKS1B-205ENST00000473344 MEIS3P2A8K0S8 358 aa7.74□□□□□ -1.17
CKS1B-205ENST00000473344 NRP1O14786 923 aa7.74□□□□□ -1.17
CKS1B-205ENST00000473344 PI15O43692 258 aa7.74□□□□□ -1.17
CKS1B-205ENST00000473344 DKC1O60832 514 aaKnown RBP eCLIP7.74□□□□□ -1.17
CKS1B-205ENST00000473344 ZNF623O75123 536 aa7.74□□□□□ -1.17
CKS1B-205ENST00000473344 MAFO75444 373 aaPredicted RBP7.74□□□□□ -1.17
CKS1B-205ENST00000473344 NR1I2O75469 434 aa7.74□□□□□ -1.17
CKS1B-205ENST00000473344 POMCP01189 267 aa7.74□□□□□ -1.17
CKS1B-205ENST00000473344 ADH1AP07327 375 aa7.74□□□□□ -1.17
CKS1B-205ENST00000473344 CFHP08603 1231 aa7.74□□□□□ -1.17
CKS1B-205ENST00000473344 CNPP09543 421 aaKnown RBP7.74□□□□□ -1.17
CKS1B-205ENST00000473344 CPA1P15085 419 aa7.74□□□□□ -1.17
CKS1B-205ENST00000473344 GBP2P32456 591 aaPredicted RBP7.74□□□□□ -1.17
CKS1B-205ENST00000473344 TERF1P54274 439 aa7.74□□□□□ -1.17
CKS1B-205ENST00000473344 NCBP1Q09161 790 aaKnown RBP7.74□□□□□ -1.17
CKS1B-205ENST00000473344 Q4G0T1 1027 aa7.74□□□□□ -1.17
CKS1B-205ENST00000473344 BMP2KLQ5H9B9 411 aa7.74□□□□□ -1.17
CKS1B-205ENST00000473344 CWF19L1Q69YN2 538 aaKnown RBP7.74□□□□□ -1.17
CKS1B-205ENST00000473344 BLOC1S2Q6QNY1 142 aa7.74□□□□□ -1.17
CKS1B-205ENST00000473344 ZNF280BQ86YH2 543 aa7.74□□□□□ -1.17
CKS1B-205ENST00000473344 KSR1Q8IVT5 923 aa7.74□□□□□ -1.17
CKS1B-205ENST00000473344 EXOC8Q8IYI6 725 aa7.74□□□□□ -1.17
CKS1B-205ENST00000473344 CCDC105Q8IYK2 499 aa7.74□□□□□ -1.17
CKS1B-205ENST00000473344 TRIM22Q8IYM9 498 aa7.74□□□□□ -1.17
CKS1B-205ENST00000473344 TTC13Q8NBP0 860 aa7.74□□□□□ -1.17
CKS1B-205ENST00000473344 TBCKQ8TEA7 893 aa7.74□□□□□ -1.17
CKS1B-205ENST00000473344 BCL7CQ8WUZ0 217 aaPredicted RBP7.74□□□□□ -1.17
CKS1B-205ENST00000473344 GJA10Q969M2 543 aa7.74□□□□□ -1.17
CKS1B-205ENST00000473344 JAKMIP1Q96N16 626 aaKnown RBP7.74□□□□□ -1.17
CKS1B-205ENST00000473344 KLHL5Q96PQ7 755 aa7.74□□□□□ -1.17
CKS1B-205ENST00000473344 TMEM175Q9BSA9 504 aa7.74□□□□□ -1.17
CKS1B-205ENST00000473344 SLKQ9H2G2 1235 aaPredicted RBP7.74□□□□□ -1.17
CKS1B-205ENST00000473344 RSAD1Q9HA92 442 aa7.74□□□□□ -1.17
CKS1B-205ENST00000473344 UBN1Q9NPG3 1134 aa7.74□□□□□ -1.17
CKS1B-205ENST00000473344 AGPAT5Q9NUQ2 364 aa7.74□□□□□ -1.17
CKS1B-205ENST00000473344 CNTNAP2Q9UHC6 1331 aa7.74□□□□□ -1.17
CKS1B-205ENST00000473344 DMXL1Q9Y485 3027 aa7.73□□□□□ -1.17
CKS1B-205ENST00000473344 IGKV6-21A0A0C4DH24 114 aa7.73□□□□□ -1.17
CKS1B-205ENST00000473344 CCDC195A0A1B0GUA6 201 aa7.73□□□□□ -1.17
CKS1B-205ENST00000473344 MARCH6O60337 910 aa7.73□□□□□ -1.17
CKS1B-205ENST00000473344 PSMD10O75832 226 aa7.73□□□□□ -1.17
CKS1B-205ENST00000473344 DDHD2O94830 711 aa7.73□□□□□ -1.17
CKS1B-205ENST00000473344 ERLIN2O94905 339 aa7.73□□□□□ -1.17
CKS1B-205ENST00000473344 GLUD1P00367 558 aa7.73□□□□□ -1.17
CKS1B-205ENST00000473344 SOD2P04179 222 aa7.73□□□□□ -1.17
CKS1B-205ENST00000473344 SRGAP2CP0DJJ0 459 aa7.73□□□□□ -1.17
CKS1B-205ENST00000473344 OR1G1P47890 313 aa7.73□□□□□ -1.17
CKS1B-205ENST00000473344 PSMC5P62195 406 aa7.73□□□□□ -1.17
CKS1B-205ENST00000473344 PLA2G4FQ68DD2 849 aa7.73□□□□□ -1.17
CKS1B-205ENST00000473344 CYP26C1Q6V0L0 522 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms