RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 H2AFYO75367 372 aaKnown RBP6.66□□□□□ -1.34
RTF1-203ENST00000473214 ITGAVP06756 1048 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 POU2F2P09086 479 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 RAG1P15918 1043 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 ALOX12P18054 663 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 LTKP29376 864 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 HOXA10P31260 410 aaPredicted RBP6.66□□□□□ -1.34
RTF1-203ENST00000473214 HNF4AP41235 474 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 CACNB3P54284 484 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 OCRLQ01968 901 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 RPL6Q02878 288 aaKnown RBP6.66□□□□□ -1.34
RTF1-203ENST00000473214 AP1B1Q10567 949 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 TNIP1Q15025 636 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 PLCL1Q15111 1095 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 OVOS1Q6IE37 1185 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 OGFOD2Q6N063 350 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 CCBE1Q6UXH8 406 aaPredicted RBP6.66□□□□□ -1.34
RTF1-203ENST00000473214 DDX53Q86TM3 631 aaKnown RBP6.66□□□□□ -1.34
RTF1-203ENST00000473214 LRRTM4Q86VH4 590 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 NCAPG2Q86XI2 1143 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 DENND1CQ8IV53 801 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 CACNA2D3Q8IZS8 1091 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 GIMAP1Q8WWP7 306 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 HAUS7Q99871 368 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 ORAI3Q9BRQ5 295 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 RNF208Q9H0X6 261 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 MAGEH1Q9H213 219 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 KCNF1Q9H3M0 494 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 JMJD4Q9H9V9 463 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 STARD7Q9NQZ5 370 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 HOXC10Q9NYD6 342 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 ORC3Q9UBD5 711 aaPredicted RBP6.66□□□□□ -1.34
RTF1-203ENST00000473214 EIF2B4Q9UI10 523 aaKnown RBP6.66□□□□□ -1.34
RTF1-203ENST00000473214 SALL4Q9UJQ4 1053 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 VPS28Q9UK41 221 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 ITGB1BP2Q9UKP3 347 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 ZKSCAN5Q9Y2L8 839 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 ATP6V0A2Q9Y487 856 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.66□□□□□ -1.34
RTF1-203ENST00000473214 TMEM94Q12767 1356 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 CLIP1P30622 1438 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 NCOA2Q15596 1464 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 KDM5DQ9BY66 1539 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 FAM135AQ9P2D6 1515 aa6.66□□□□□ -1.34
RTF1-203ENST00000473214 CBX4O00257 560 aa6.65□□□□□ -1.34
RTF1-203ENST00000473214 PLOD2O00469 737 aa6.65□□□□□ -1.34
RTF1-203ENST00000473214 KIAA0754O94854 1291 aa6.65□□□□□ -1.34
RTF1-203ENST00000473214 GUCA1CO95843 209 aa6.65□□□□□ -1.34
RTF1-203ENST00000473214 VEGFAP15692 232 aaPredicted RBP6.65□□□□□ -1.34
RTF1-203ENST00000473214 CASP5P51878 434 aa6.65□□□□□ -1.34
RTF1-203ENST00000473214 ZNF143P52747 638 aaPredicted RBP6.65□□□□□ -1.34
RTF1-203ENST00000473214 SLC12A2P55011 1212 aa6.65□□□□□ -1.34
RTF1-203ENST00000473214 POLR2FP61218 127 aaKnown RBP6.65□□□□□ -1.34
RTF1-203ENST00000473214 SEMA3AQ14563 771 aa6.65□□□□□ -1.34
RTF1-203ENST00000473214 CLEC16AQ2KHT3 1053 aa6.65□□□□□ -1.34
RTF1-203ENST00000473214 ARL13BQ3SXY8 428 aa6.65□□□□□ -1.34
RTF1-203ENST00000473214 APOA5Q6Q788 366 aa6.65□□□□□ -1.34
RTF1-203ENST00000473214 CRTC1Q6UUV9 634 aa6.65□□□□□ -1.34
RTF1-203ENST00000473214 ZNF227Q86WZ6 799 aa6.65□□□□□ -1.34
RTF1-203ENST00000473214 ABI1Q8IZP0 508 aa6.65□□□□□ -1.34
RTF1-203ENST00000473214 AVL9Q8NBF6 648 aa6.65□□□□□ -1.34
RTF1-203ENST00000473214 ZMIZ2Q8NF64 920 aa6.65□□□□□ -1.34
RTF1-203ENST00000473214 FNIP1Q8TF40 1166 aa6.65□□□□□ -1.34
RTF1-203ENST00000473214 CHTF18Q8WVB6 975 aa6.65□□□□□ -1.34
RTF1-203ENST00000473214 RRP36Q96EU6 259 aaKnown RBP6.65□□□□□ -1.34
RTF1-203ENST00000473214 RBM18Q96H35 190 aaKnown RBP6.65□□□□□ -1.34
RTF1-203ENST00000473214 TMEM169Q96HH4 297 aa6.65□□□□□ -1.34
RTF1-203ENST00000473214 SORBS1Q9BX66 1292 aaKnown RBP6.65□□□□□ -1.34
RTF1-203ENST00000473214 LGR4Q9BXB1 951 aa6.65□□□□□ -1.34
RTF1-203ENST00000473214 GHITMQ9H3K2 345 aa6.65□□□□□ -1.34
RTF1-203ENST00000473214 XAB2Q9HCS7 855 aaKnown RBP6.65□□□□□ -1.34
RTF1-203ENST00000473214 KRT84Q9NSB2 600 aa6.65□□□□□ -1.34
RTF1-203ENST00000473214 FAM86C1Q9NVL1 165 aa6.65□□□□□ -1.34
RTF1-203ENST00000473214 RBM28Q9NW13 759 aaKnown RBP6.65□□□□□ -1.34
RTF1-203ENST00000473214 HPF1Q9NWY4 346 aa6.65□□□□□ -1.34
RTF1-203ENST00000473214 LRFN1Q9P244 771 aa6.65□□□□□ -1.34
RTF1-203ENST00000473214 ZNF711Q9Y462 761 aa6.65□□□□□ -1.34
RTF1-203ENST00000473214 SNX13Q9Y5W8 968 aa6.65□□□□□ -1.34
RTF1-203ENST00000473214 NLRP1Q9C000 1473 aa6.65□□□□□ -1.35
RTF1-203ENST00000473214 GPATCH8Q9UKJ3 1502 aaKnown RBP6.65□□□□□ -1.35
RTF1-203ENST00000473214 UBR1Q8IWV7 1749 aa6.64□□□□□ -1.35
RTF1-203ENST00000473214 SYNJ2BP-COX16A0A087WUM0 186 aa6.64□□□□□ -1.35
RTF1-203ENST00000473214 ANKRD34BA5PLL1 514 aa6.64□□□□□ -1.35
RTF1-203ENST00000473214 MEGF11A6BM72 1044 aa6.64□□□□□ -1.35
RTF1-203ENST00000473214 FAM177BA6PVY3 158 aa6.64□□□□□ -1.35
RTF1-203ENST00000473214 WDR64B1ANS9 1081 aa6.64□□□□□ -1.35
RTF1-203ENST00000473214 F8W031 263 aaPredicted RBP6.64□□□□□ -1.35
RTF1-203ENST00000473214 NFKBIEO00221 500 aa6.64□□□□□ -1.35
RTF1-203ENST00000473214 MUSKO15146 869 aa6.64□□□□□ -1.35
RTF1-203ENST00000473214 FFAR2O15552 330 aa6.64□□□□□ -1.35
RTF1-203ENST00000473214 TBCAO75347 108 aaKnown RBP6.64□□□□□ -1.35
RTF1-203ENST00000473214 GLRX3O76003 335 aaKnown RBP6.64□□□□□ -1.35
RTF1-203ENST00000473214 URI1O94763 535 aaPredicted RBP6.64□□□□□ -1.35
RTF1-203ENST00000473214 HTR3BO95264 441 aa6.64□□□□□ -1.35
RTF1-203ENST00000473214 CLTBP09497 229 aa6.64□□□□□ -1.35
RTF1-203ENST00000473214 NME1P15531 152 aaKnown RBP6.64□□□□□ -1.35
RTF1-203ENST00000473214 PDIA3P30101 505 aaKnown RBP6.64□□□□□ -1.35
RTF1-203ENST00000473214 NOP2P46087 812 aaKnown RBP6.64□□□□□ -1.35
RTF1-203ENST00000473214 CTCFP49711 727 aaPredicted RBP6.64□□□□□ -1.35
RTF1-203ENST00000473214 MCM2P49736 904 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms