RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 ODR4Q5SWX8 454 aa8.31□□□□□ -1.08
SCAF4-205ENST00000472318 ZC3H14Q6PJT7 736 aaKnown RBP8.31□□□□□ -1.08
SCAF4-205ENST00000472318 MIGA2Q7L4E1 593 aa8.31□□□□□ -1.08
SCAF4-205ENST00000472318 C8orf48Q96LL4 319 aa8.31□□□□□ -1.08
SCAF4-205ENST00000472318 CDC5LQ99459 802 aaKnown RBP8.31□□□□□ -1.08
SCAF4-205ENST00000472318 SENP6Q9GZR1 1112 aaPredicted RBP8.31□□□□□ -1.08
SCAF4-205ENST00000472318 GREM2Q9H772 168 aa8.31□□□□□ -1.08
SCAF4-205ENST00000472318 PDLIM7Q9NR12 457 aa8.31□□□□□ -1.08
SCAF4-205ENST00000472318 C5orf42Q9H799 3197 aa8.3□□□□□ -1.08
SCAF4-205ENST00000472318 A0A0G2JLL6 359 aaPredicted RBP8.3□□□□□ -1.08
SCAF4-205ENST00000472318 PCCAP05165 728 aaPredicted RBP8.3□□□□□ -1.08
SCAF4-205ENST00000472318 IL1R1P14778 569 aa8.3□□□□□ -1.08
SCAF4-205ENST00000472318 IGFBP6P24592 240 aaPredicted RBP8.3□□□□□ -1.08
SCAF4-205ENST00000472318 KCNQ1P51787 676 aa8.3□□□□□ -1.08
SCAF4-205ENST00000472318 GNPTABQ3T906 1256 aa8.3□□□□□ -1.08
SCAF4-205ENST00000472318 CNKSR3Q6P9H4 555 aa8.3□□□□□ -1.08
SCAF4-205ENST00000472318 PAQR3Q6TCH7 311 aa8.3□□□□□ -1.08
SCAF4-205ENST00000472318 ANKRD13CQ8N6S4 541 aa8.3□□□□□ -1.08
SCAF4-205ENST00000472318 TTLL11Q8NHH1 800 aa8.3□□□□□ -1.08
SCAF4-205ENST00000472318 KLHL6Q8WZ60 621 aa8.3□□□□□ -1.08
SCAF4-205ENST00000472318 SHDQ96IW2 340 aa8.3□□□□□ -1.08
SCAF4-205ENST00000472318 SRPK1Q96SB4 655 aaKnown RBP8.3□□□□□ -1.08
SCAF4-205ENST00000472318 GBP3Q9H0R5 595 aa8.3□□□□□ -1.08
SCAF4-205ENST00000472318 PRDM12Q9H4Q4 367 aa8.3□□□□□ -1.08
SCAF4-205ENST00000472318 SIRPGQ9P1W8 387 aa8.3□□□□□ -1.08
SCAF4-205ENST00000472318 SMIM22K7EJ46 135 aa8.29□□□□□ -1.08
SCAF4-205ENST00000472318 CXCL11O14625 94 aa8.29□□□□□ -1.08
SCAF4-205ENST00000472318 PRRG2O14669 202 aa8.29□□□□□ -1.08
SCAF4-205ENST00000472318 AURKAO14965 403 aa8.29□□□□□ -1.08
SCAF4-205ENST00000472318 CCND3P30281 292 aaPredicted RBP8.29□□□□□ -1.08
SCAF4-205ENST00000472318 L1CAMP32004 1257 aa8.29□□□□□ -1.08
SCAF4-205ENST00000472318 ZNF200P98182 395 aaPredicted RBP8.29□□□□□ -1.08
SCAF4-205ENST00000472318 SLC7A5Q01650 507 aa8.29□□□□□ -1.08
SCAF4-205ENST00000472318 EEF1DP3Q658K8 133 aa8.29□□□□□ -1.08
SCAF4-205ENST00000472318 HEATR6Q6AI08 1181 aaKnown RBP8.29□□□□□ -1.08
SCAF4-205ENST00000472318 FERMT3Q86UX7 667 aa8.29□□□□□ -1.08
SCAF4-205ENST00000472318 ADCY4Q8NFM4 1077 aa8.29□□□□□ -1.08
SCAF4-205ENST00000472318 MCMBPQ9BTE3 642 aa8.29□□□□□ -1.08
SCAF4-205ENST00000472318 ZNF341Q9BYN7 854 aa8.29□□□□□ -1.08
SCAF4-205ENST00000472318 ZNF112Q9UJU3 913 aa8.29□□□□□ -1.08
SCAF4-205ENST00000472318 PCDHB10Q9UN67 800 aa8.29□□□□□ -1.08
SCAF4-205ENST00000472318 NUDCQ9Y266 331 aa8.29□□□□□ -1.08
SCAF4-205ENST00000472318 COMMD10Q9Y6G5 202 aa8.29□□□□□ -1.08
SCAF4-205ENST00000472318 B8ZZF3 427 aa8.28□□□□□ -1.08
SCAF4-205ENST00000472318 BUB1BO60566 1050 aaPredicted RBP8.28□□□□□ -1.08
SCAF4-205ENST00000472318 EPHX1P07099 455 aa8.28□□□□□ -1.08
SCAF4-205ENST00000472318 CYP2B6P20813 491 aa8.28□□□□□ -1.08
SCAF4-205ENST00000472318 ITGB8P26012 769 aa8.28□□□□□ -1.08
SCAF4-205ENST00000472318 CACNB2Q08289 660 aaPredicted RBP8.28□□□□□ -1.08
SCAF4-205ENST00000472318 FOXD4Q12950 439 aaPredicted RBP8.28□□□□□ -1.08
SCAF4-205ENST00000472318 PPP2R5DQ14738 602 aa8.28□□□□□ -1.08
SCAF4-205ENST00000472318 BICRALQ6AI39 1079 aa8.28□□□□□ -1.08
SCAF4-205ENST00000472318 PRRT2Q7Z6L0 340 aaPredicted RBP8.28□□□□□ -1.08
SCAF4-205ENST00000472318 C11orf96Q7Z7L8 435 aa8.28□□□□□ -1.08
SCAF4-205ENST00000472318 SMCR8Q8TEV9 937 aaPredicted RBP8.28□□□□□ -1.08
SCAF4-205ENST00000472318 TIFAQ96CG3 184 aa8.28□□□□□ -1.08
SCAF4-205ENST00000472318 MYD88Q99836 296 aa8.28□□□□□ -1.08
SCAF4-205ENST00000472318 ANKRD2Q9GZV1 360 aa8.28□□□□□ -1.08
SCAF4-205ENST00000472318 GNL3LQ9NVN8 582 aaKnown RBP8.28□□□□□ -1.08
SCAF4-205ENST00000472318 ATP11BQ9Y2G3 1177 aa8.28□□□□□ -1.08
SCAF4-205ENST00000472318 ECM29Q5VYK3 1845 aa8.28□□□□□ -1.08
SCAF4-205ENST00000472318 MGAMO43451 1857 aa8.28□□□□□ -1.08
SCAF4-205ENST00000472318 DMDP11532 3685 aa8.27□□□□□ -1.08
SCAF4-205ENST00000472318 TRIM43BA6NCK2 446 aa8.27□□□□□ -1.09
SCAF4-205ENST00000472318 CDC45O75419 566 aa8.27□□□□□ -1.09
SCAF4-205ENST00000472318 TAF5LO75529 589 aa8.27□□□□□ -1.09
SCAF4-205ENST00000472318 KCNJ4P48050 445 aa8.27□□□□□ -1.09
SCAF4-205ENST00000472318 NCKAP1LP55160 1127 aa8.27□□□□□ -1.09
SCAF4-205ENST00000472318 CHRNDQ07001 517 aa8.27□□□□□ -1.09
SCAF4-205ENST00000472318 UBE4AQ14139 1066 aa8.27□□□□□ -1.09
SCAF4-205ENST00000472318 CCSAPQ6IQ19 270 aaPredicted RBP8.27□□□□□ -1.09
SCAF4-205ENST00000472318 GADL1Q6ZQY3 521 aa8.27□□□□□ -1.09
SCAF4-205ENST00000472318 RELTQ969Z4 430 aa8.27□□□□□ -1.09
SCAF4-205ENST00000472318 TRIM43Q96BQ3 446 aaPredicted RBP8.27□□□□□ -1.09
SCAF4-205ENST00000472318 NAP1L5Q96NT1 182 aaPredicted RBP8.27□□□□□ -1.09
SCAF4-205ENST00000472318 IER2Q9BTL4 223 aa8.27□□□□□ -1.09
SCAF4-205ENST00000472318 XYLT2Q9H1B5 865 aa8.27□□□□□ -1.09
SCAF4-205ENST00000472318 RTEL1Q9NZ71 1219 aa8.27□□□□□ -1.09
SCAF4-205ENST00000472318 CGGBP1Q9UFW8 167 aaPredicted RBP8.27□□□□□ -1.09
SCAF4-205ENST00000472318 LTBP2Q14767 1821 aa8.26□□□□□ -1.09
SCAF4-205ENST00000472318 ARAP2Q8WZ64 1704 aa8.26□□□□□ -1.09
SCAF4-205ENST00000472318 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.26□□□□□ -1.09
SCAF4-205ENST00000472318 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.26□□□□□ -1.09
SCAF4-205ENST00000472318 PI4K2BG5E9Z4 385 aa8.26□□□□□ -1.09
SCAF4-205ENST00000472318 STXBP3O00186 592 aa8.26□□□□□ -1.09
SCAF4-205ENST00000472318 SSBP05455 408 aaKnown RBP eCLIP8.26□□□□□ -1.09
SCAF4-205ENST00000472318 TACR1P25103 407 aa8.26□□□□□ -1.09
SCAF4-205ENST00000472318 IGHMBP2P38935 993 aaKnown RBP8.26□□□□□ -1.09
SCAF4-205ENST00000472318 NASPP49321 788 aaPredicted RBP8.26□□□□□ -1.09
SCAF4-205ENST00000472318 CASP7P55210 303 aa8.26□□□□□ -1.09
SCAF4-205ENST00000472318 GRB10Q13322 594 aa8.26□□□□□ -1.09
SCAF4-205ENST00000472318 FAM110CQ1W6H9 321 aa8.26□□□□□ -1.09
SCAF4-205ENST00000472318 MFSD14BQ5SR56 506 aa8.26□□□□□ -1.09
SCAF4-205ENST00000472318 C15orf52Q6ZUT6 534 aaKnown RBP8.26□□□□□ -1.09
SCAF4-205ENST00000472318 FASTKD5Q7L8L6 764 aaKnown RBP8.26□□□□□ -1.09
SCAF4-205ENST00000472318 FAM83AQ86UY5 434 aa8.26□□□□□ -1.09
SCAF4-205ENST00000472318 ARHGEF39Q8N4T4 335 aa8.26□□□□□ -1.09
SCAF4-205ENST00000472318 CCDC191Q8NCU4 936 aa8.26□□□□□ -1.09
SCAF4-205ENST00000472318 RCC1LQ96I51 464 aaKnown RBP8.26□□□□□ -1.09
SCAF4-205ENST00000472318 SCYL1Q96KG9 808 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms