RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 ERVFC1P60507 584 aa5.14□□□□□ -1.59
LMNB1-205ENST00000472034 HNRNPUQ00839 825 aaKnown RBP eCLIP5.14□□□□□ -1.59
LMNB1-205ENST00000472034 CSTF1Q05048 431 aaKnown RBP5.14□□□□□ -1.59
LMNB1-205ENST00000472034 C19orf57Q0VDD7 668 aa5.14□□□□□ -1.59
LMNB1-205ENST00000472034 SUZ12Q15022 739 aaKnown RBP5.14□□□□□ -1.59
LMNB1-205ENST00000472034 GRIK4Q16099 956 aa5.14□□□□□ -1.59
LMNB1-205ENST00000472034 DUSP6Q16828 381 aa5.14□□□□□ -1.59
LMNB1-205ENST00000472034 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.14□□□□□ -1.59
LMNB1-205ENST00000472034 ATF7IPQ6VMQ6 1270 aa5.14□□□□□ -1.59
LMNB1-205ENST00000472034 DTHD1Q6ZMT9 781 aa5.14□□□□□ -1.59
LMNB1-205ENST00000472034 PRR23CQ6ZRP0 262 aa5.14□□□□□ -1.59
LMNB1-205ENST00000472034 ZDHHC14Q8IZN3 488 aa5.14□□□□□ -1.59
LMNB1-205ENST00000472034 C12orf76Q8N812 135 aaPredicted RBP5.14□□□□□ -1.59
LMNB1-205ENST00000472034 TDRD5Q8NAT2 981 aaKnown RBP5.14□□□□□ -1.59
LMNB1-205ENST00000472034 RSAD2Q8WXG1 361 aa5.14□□□□□ -1.59
LMNB1-205ENST00000472034 SLC7A3Q8WY07 619 aa5.14□□□□□ -1.59
LMNB1-205ENST00000472034 KAT2BQ92831 832 aa5.14□□□□□ -1.59
LMNB1-205ENST00000472034 PPP2R3CQ969Q6 453 aa5.14□□□□□ -1.59
LMNB1-205ENST00000472034 RUNDC1Q96C34 613 aa5.14□□□□□ -1.59
LMNB1-205ENST00000472034 WDR11Q9BZH6 1224 aa5.14□□□□□ -1.59
LMNB1-205ENST00000472034 MRPL18Q9H0U6 180 aaKnown RBP5.14□□□□□ -1.59
LMNB1-205ENST00000472034 CLEC4MQ9H2X3 399 aaPredicted RBP5.14□□□□□ -1.59
LMNB1-205ENST00000472034 HDAC6Q9UBN7 1215 aa5.14□□□□□ -1.59
LMNB1-205ENST00000472034 GMEB2Q9UKD1 530 aa5.14□□□□□ -1.59
LMNB1-205ENST00000472034 SOX13Q9UN79 622 aa5.14□□□□□ -1.59
LMNB1-205ENST00000472034 DUSP12Q9UNI6 340 aa5.14□□□□□ -1.59
LMNB1-205ENST00000472034 TMX2Q9Y320 296 aa5.14□□□□□ -1.59
LMNB1-205ENST00000472034 Q9Y3F1 56 aa5.14□□□□□ -1.59
LMNB1-205ENST00000472034 PDS5AQ29RF7 1337 aaKnown RBP5.14□□□□□ -1.59
LMNB1-205ENST00000472034 TMEM8BA6NDV4 472 aa5.13□□□□□ -1.59
LMNB1-205ENST00000472034 PRPF40AO75400 957 aaKnown RBP5.13□□□□□ -1.59
LMNB1-205ENST00000472034 KCNK5O95279 499 aa5.13□□□□□ -1.59
LMNB1-205ENST00000472034 BAG3O95817 575 aa5.13□□□□□ -1.59
LMNB1-205ENST00000472034 IGHA1P01876 353 aa5.13□□□□□ -1.59
LMNB1-205ENST00000472034 P4HBP07237 508 aaKnown RBP5.13□□□□□ -1.59
LMNB1-205ENST00000472034 TPM2P07951 284 aa5.13□□□□□ -1.59
LMNB1-205ENST00000472034 CYP2D6P10635 497 aa5.13□□□□□ -1.59
LMNB1-205ENST00000472034 AKR1B1P15121 316 aa5.13□□□□□ -1.59
LMNB1-205ENST00000472034 CD68P34810 354 aaPredicted RBP5.13□□□□□ -1.59
LMNB1-205ENST00000472034 CPT1AP50416 773 aa5.13□□□□□ -1.59
LMNB1-205ENST00000472034 GATMP50440 423 aa5.13□□□□□ -1.59
LMNB1-205ENST00000472034 TERF1P54274 439 aa5.13□□□□□ -1.59
LMNB1-205ENST00000472034 ICA1Q05084 483 aa5.13□□□□□ -1.59
LMNB1-205ENST00000472034 PTPN11Q06124 597 aaPredicted RBP5.13□□□□□ -1.59
LMNB1-205ENST00000472034 GABPAQ06546 454 aa5.13□□□□□ -1.59
LMNB1-205ENST00000472034 APOBRQ0VD83 1088 aa5.13□□□□□ -1.59
LMNB1-205ENST00000472034 TDGQ13569 410 aa5.13□□□□□ -1.59
LMNB1-205ENST00000472034 BTG3Q14201 252 aaPredicted RBP5.13□□□□□ -1.59
LMNB1-205ENST00000472034 UVSSAQ2YD98 709 aa5.13□□□□□ -1.59
LMNB1-205ENST00000472034 LONRF3Q496Y0 759 aa5.13□□□□□ -1.59
LMNB1-205ENST00000472034 PAN2Q504Q3 1202 aaKnown RBP5.13□□□□□ -1.59
LMNB1-205ENST00000472034 IL31Q6EBC2 164 aa5.13□□□□□ -1.59
LMNB1-205ENST00000472034 NAA16Q6N069 864 aaPredicted RBP5.13□□□□□ -1.59
LMNB1-205ENST00000472034 TXNDC11Q6PKC3 985 aa5.13□□□□□ -1.59
LMNB1-205ENST00000472034 KRBA2Q6ZNG9 492 aa5.13□□□□□ -1.59
LMNB1-205ENST00000472034 MIGA1Q8NAN2 632 aa5.13□□□□□ -1.59
LMNB1-205ENST00000472034 SPATA5Q8NB90 893 aa5.13□□□□□ -1.59
LMNB1-205ENST00000472034 ZBTB44Q8NCP5 570 aa5.13□□□□□ -1.59
LMNB1-205ENST00000472034 ST13P5Q8NFI4 369 aaPredicted RBP5.13□□□□□ -1.59
LMNB1-205ENST00000472034 CXorf38Q8TB03 319 aa5.13□□□□□ -1.59
LMNB1-205ENST00000472034 MICAL1Q8TDZ2 1067 aa5.13□□□□□ -1.59
LMNB1-205ENST00000472034 ATRIPQ8WXE1 791 aa5.13□□□□□ -1.59
LMNB1-205ENST00000472034 HHIPQ96QV1 700 aa5.13□□□□□ -1.59
LMNB1-205ENST00000472034 TCF12Q99081 682 aa5.13□□□□□ -1.59
LMNB1-205ENST00000472034 NOL10Q9BSC4 688 aaKnown RBP5.13□□□□□ -1.59
LMNB1-205ENST00000472034 BCO2Q9BYV7 579 aa5.13□□□□□ -1.59
LMNB1-205ENST00000472034 A1CFQ9NQ94 594 aaKnown RBP5.13□□□□□ -1.59
LMNB1-205ENST00000472034 SEMA4GQ9NTN9 838 aa5.13□□□□□ -1.59
LMNB1-205ENST00000472034 LRP2BPQ9P2M1 347 aa5.13□□□□□ -1.59
LMNB1-205ENST00000472034 PA2G4Q9UQ80 394 aaKnown RBP5.13□□□□□ -1.59
LMNB1-205ENST00000472034 SIT1Q9Y3P8 196 aa5.13□□□□□ -1.59
LMNB1-205ENST00000472034 PCDHGA2Q9Y5H1 932 aa5.13□□□□□ -1.59
LMNB1-205ENST00000472034 SDK1Q7Z5N4 2213 aa5.13□□□□□ -1.59
LMNB1-205ENST00000472034 PATJQ8NI35 1801 aa5.12□□□□□ -1.59
LMNB1-205ENST00000472034 TMEM238LA0A1B0GVL6 79 aa5.12□□□□□ -1.59
LMNB1-205ENST00000472034 EIF4E1BA6NMX2 242 aaKnown RBP5.12□□□□□ -1.59
LMNB1-205ENST00000472034 HIDE1A8MVS5 230 aa5.12□□□□□ -1.59
LMNB1-205ENST00000472034 ARHGAP6O43182 974 aa5.12□□□□□ -1.59
LMNB1-205ENST00000472034 DEAF1O75398 565 aaPredicted RBP5.12□□□□□ -1.59
LMNB1-205ENST00000472034 ALDH1L1O75891 902 aa5.12□□□□□ -1.59
LMNB1-205ENST00000472034 PARNO95453 639 aaKnown RBP5.12□□□□□ -1.59
LMNB1-205ENST00000472034 CTSHP09668 335 aa5.12□□□□□ -1.59
LMNB1-205ENST00000472034 NEFHP12036 1026 aa5.12□□□□□ -1.59
LMNB1-205ENST00000472034 GSTT1P30711 240 aa5.12□□□□□ -1.59
LMNB1-205ENST00000472034 THPOP40225 353 aa5.12□□□□□ -1.59
LMNB1-205ENST00000472034 SATB1Q01826 763 aa5.12□□□□□ -1.59
LMNB1-205ENST00000472034 SRSF1Q07955 248 aaKnown RBP eCLIP5.12□□□□□ -1.59
LMNB1-205ENST00000472034 PCDH1Q08174 1060 aa5.12□□□□□ -1.59
LMNB1-205ENST00000472034 GRM2Q14416 872 aa5.12□□□□□ -1.59
LMNB1-205ENST00000472034 SF3A2Q15428 464 aaKnown RBP5.12□□□□□ -1.59
LMNB1-205ENST00000472034 CDC37Q16543 378 aaPredicted RBP5.12□□□□□ -1.59
LMNB1-205ENST00000472034 RPS26P11Q5JNZ5 115 aaPredicted RBP5.12□□□□□ -1.59
LMNB1-205ENST00000472034 HP1BP3Q5SSJ5 553 aaPredicted RBP5.12□□□□□ -1.59
LMNB1-205ENST00000472034 DNAJC14Q6Y2X3 702 aaPredicted RBP5.12□□□□□ -1.59
LMNB1-205ENST00000472034 TMEM184AQ6ZMB5 413 aa5.12□□□□□ -1.59
LMNB1-205ENST00000472034 GLIS3Q8NEA6 775 aa5.12□□□□□ -1.59
LMNB1-205ENST00000472034 ZNF689Q96CS4 500 aaPredicted RBP5.12□□□□□ -1.59
LMNB1-205ENST00000472034 DYNLL2Q96FJ2 89 aa5.12□□□□□ -1.59
LMNB1-205ENST00000472034 SLF1Q9BQI6 1058 aa5.12□□□□□ -1.59
LMNB1-205ENST00000472034 SCNM1Q9BWG6 230 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms