RNA–Protein interactions for RNA: ENST00000471640.1

NCKAP1-203, Transcript of NCK associated protein 1, humanhuman

TSL 5

Gene NCKAP1, Length 306 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-203ENST00000471640 DGCR2P98153 550 aa3.32□□□□□ -1.88
NCKAP1-203ENST00000471640 FAPQ12884 760 aa3.32□□□□□ -1.88
NCKAP1-203ENST00000471640 STRN3Q13033 797 aa3.32□□□□□ -1.88
NCKAP1-203ENST00000471640 MRPL49Q13405 166 aaKnown RBP3.32□□□□□ -1.88
NCKAP1-203ENST00000471640 TOB2Q14106 344 aaPredicted RBP3.32□□□□□ -1.88
NCKAP1-203ENST00000471640 TRIM25Q14258 630 aaKnown RBP3.32□□□□□ -1.88
NCKAP1-203ENST00000471640 FSCN1Q16658 493 aaKnown RBP3.32□□□□□ -1.88
NCKAP1-203ENST00000471640 C19orf54Q5BKX5 351 aa3.32□□□□□ -1.88
NCKAP1-203ENST00000471640 CT47A1Q5JQC4 288 aaPredicted RBP3.32□□□□□ -1.88
NCKAP1-203ENST00000471640 PITRM1Q5JRX3 1037 aa3.32□□□□□ -1.88
NCKAP1-203ENST00000471640 HDGFL2Q7Z4V5 671 aaPredicted RBP3.32□□□□□ -1.88
NCKAP1-203ENST00000471640 ELOA2Q8IYF1 753 aaPredicted RBP3.32□□□□□ -1.88
NCKAP1-203ENST00000471640 AFAP1L2Q8N4X5 818 aa3.32□□□□□ -1.88
NCKAP1-203ENST00000471640 MB21D1Q8N884 522 aa3.32□□□□□ -1.88
NCKAP1-203ENST00000471640 GLB1L3Q8NCI6 653 aaPredicted RBP3.32□□□□□ -1.88
NCKAP1-203ENST00000471640 CLRN3Q8NCR9 226 aa3.32□□□□□ -1.88
NCKAP1-203ENST00000471640 OR5M3Q8NGP4 307 aa3.32□□□□□ -1.88
NCKAP1-203ENST00000471640 NAF1Q96HR8 494 aaKnown RBP3.32□□□□□ -1.88
NCKAP1-203ENST00000471640 RAX2Q96IS3 184 aa3.32□□□□□ -1.88
NCKAP1-203ENST00000471640 EPC1Q9H2F5 836 aa3.32□□□□□ -1.88
NCKAP1-203ENST00000471640 KCTD10Q9H3F6 313 aa3.32□□□□□ -1.88
NCKAP1-203ENST00000471640 PRKAB1Q9Y478 270 aa3.32□□□□□ -1.88
NCKAP1-203ENST00000471640 XDHP47989 1333 aa3.32□□□□□ -1.88
NCKAP1-203ENST00000471640 TRIM24O15164 1050 aa3.31□□□□□ -1.88
NCKAP1-203ENST00000471640 PRAMEF4O60810 478 aa3.31□□□□□ -1.88
NCKAP1-203ENST00000471640 DNAJC6O75061 913 aa3.31□□□□□ -1.88
NCKAP1-203ENST00000471640 STC2O76061 302 aa3.31□□□□□ -1.88
NCKAP1-203ENST00000471640 GASTP01350 101 aa3.31□□□□□ -1.88
NCKAP1-203ENST00000471640 VIL1P09327 827 aaKnown RBP3.31□□□□□ -1.88
NCKAP1-203ENST00000471640 CLEC2LP0C7M8 214 aa3.31□□□□□ -1.88
NCKAP1-203ENST00000471640 ENPP1P22413 925 aa3.31□□□□□ -1.88
NCKAP1-203ENST00000471640 PTGS2P35354 604 aa3.31□□□□□ -1.88
NCKAP1-203ENST00000471640 CASRP41180 1078 aa3.31□□□□□ -1.88
NCKAP1-203ENST00000471640 ID4P47928 161 aa3.31□□□□□ -1.88
NCKAP1-203ENST00000471640 LGALS4P56470 323 aa3.31□□□□□ -1.88
NCKAP1-203ENST00000471640 MRPS9P82933 396 aaKnown RBP3.31□□□□□ -1.88
NCKAP1-203ENST00000471640 UBE3CQ15386 1083 aa3.31□□□□□ -1.88
NCKAP1-203ENST00000471640 UGT8Q16880 541 aa3.31□□□□□ -1.88
NCKAP1-203ENST00000471640 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.31□□□□□ -1.88
NCKAP1-203ENST00000471640 CT83Q5H943 113 aa3.31□□□□□ -1.88
NCKAP1-203ENST00000471640 RABL3Q5HYI8 236 aa3.31□□□□□ -1.88
NCKAP1-203ENST00000471640 LRCH2Q5VUJ6 765 aa3.31□□□□□ -1.88
NCKAP1-203ENST00000471640 C1QL3Q5VWW1 255 aa3.31□□□□□ -1.88
NCKAP1-203ENST00000471640 IQSEC1Q6DN90 963 aa3.31□□□□□ -1.88
NCKAP1-203ENST00000471640 KRT26Q7Z3Y9 468 aa3.31□□□□□ -1.88
NCKAP1-203ENST00000471640 FAM83AQ86UY5 434 aa3.31□□□□□ -1.88
NCKAP1-203ENST00000471640 MSL3Q8N5Y2 521 aaKnown RBP3.31□□□□□ -1.88
NCKAP1-203ENST00000471640 SNX33Q8WV41 574 aa3.31□□□□□ -1.88
NCKAP1-203ENST00000471640 CDC5LQ99459 802 aaKnown RBP3.31□□□□□ -1.88
NCKAP1-203ENST00000471640 CPPED1Q9BRF8 314 aaPredicted RBP3.31□□□□□ -1.88
NCKAP1-203ENST00000471640 TOPORSQ9NS56 1045 aaPredicted RBP3.31□□□□□ -1.88
NCKAP1-203ENST00000471640 TRPS1Q9UHF7 1281 aa3.31□□□□□ -1.88
NCKAP1-203ENST00000471640 REXO2Q9Y3B8 237 aaKnown RBP3.31□□□□□ -1.88
NCKAP1-203ENST00000471640 B5MCH6 92 aa3.3□□□□□ -1.88
NCKAP1-203ENST00000471640 PHF2O75151 1096 aa3.3□□□□□ -1.88
NCKAP1-203ENST00000471640 TMEM127O75204 238 aa3.3□□□□□ -1.88
NCKAP1-203ENST00000471640 RECQL4O94761 1208 aa3.3□□□□□ -1.88
NCKAP1-203ENST00000471640 LPLP06858 475 aa3.3□□□□□ -1.88
NCKAP1-203ENST00000471640 MTHFD2P13995 350 aa3.3□□□□□ -1.88
NCKAP1-203ENST00000471640 HSP90B1P14625 803 aaKnown RBP3.3□□□□□ -1.88
NCKAP1-203ENST00000471640 CRHR1P34998 444 aa3.3□□□□□ -1.88
NCKAP1-203ENST00000471640 NANOS3P60323 173 aaKnown RBP3.3□□□□□ -1.88
NCKAP1-203ENST00000471640 SLC25A3Q00325 362 aa3.3□□□□□ -1.88
NCKAP1-203ENST00000471640 PDCD1Q15116 288 aa3.3□□□□□ -1.88
NCKAP1-203ENST00000471640 VPS72Q15906 364 aa3.3□□□□□ -1.88
NCKAP1-203ENST00000471640 FAM214AQ32MH5 1076 aa3.3□□□□□ -1.88
NCKAP1-203ENST00000471640 FNDC7Q5VTL7 733 aa3.3□□□□□ -1.88
NCKAP1-203ENST00000471640 IGFL4Q6B9Z1 124 aa3.3□□□□□ -1.88
NCKAP1-203ENST00000471640 PDZD4Q76G19 769 aaPredicted RBP3.3□□□□□ -1.88
NCKAP1-203ENST00000471640 STRA8Q7Z7C7 330 aa3.3□□□□□ -1.88
NCKAP1-203ENST00000471640 DNAJC10Q8IXB1 793 aa3.3□□□□□ -1.88
NCKAP1-203ENST00000471640 UBR7Q8N806 425 aa3.3□□□□□ -1.88
NCKAP1-203ENST00000471640 OR52N2Q8NGI0 321 aa3.3□□□□□ -1.88
NCKAP1-203ENST00000471640 SLC25A43Q8WUT9 341 aaPredicted RBP3.3□□□□□ -1.88
NCKAP1-203ENST00000471640 ZNF480Q8WV37 535 aa3.3□□□□□ -1.88
NCKAP1-203ENST00000471640 LENG9Q96B70 501 aa3.3□□□□□ -1.88
NCKAP1-203ENST00000471640 PRRX2Q99811 253 aa3.3□□□□□ -1.88
NCKAP1-203ENST00000471640 TRIM8Q9BZR9 551 aa3.3□□□□□ -1.88
NCKAP1-203ENST00000471640 PRDM12Q9H4Q4 367 aa3.3□□□□□ -1.88
NCKAP1-203ENST00000471640 MMRN2Q9H8L6 949 aa3.3□□□□□ -1.88
NCKAP1-203ENST00000471640 ING1Q9UK53 422 aaPredicted RBP3.3□□□□□ -1.88
NCKAP1-203ENST00000471640 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.3□□□□□ -1.88
NCKAP1-203ENST00000471640 HDAC5Q9UQL6 1122 aa3.3□□□□□ -1.88
NCKAP1-203ENST00000471640 RPTORQ8N122 1335 aa3.29□□□□□ -1.88
NCKAP1-203ENST00000471640 GRXCR1A8MXD5 290 aa3.29□□□□□ -1.88
NCKAP1-203ENST00000471640 PRR5-ARHGAP8B1AHC4 643 aa3.29□□□□□ -1.88
NCKAP1-203ENST00000471640 EYA4O95677 639 aa3.29□□□□□ -1.88
NCKAP1-203ENST00000471640 CFBP00751 764 aa3.29□□□□□ -1.88
NCKAP1-203ENST00000471640 HK1P19367 917 aa3.29□□□□□ -1.88
NCKAP1-203ENST00000471640 CTSSP25774 331 aa3.29□□□□□ -1.88
NCKAP1-203ENST00000471640 INHBCP55103 352 aa3.29□□□□□ -1.88
NCKAP1-203ENST00000471640 APBA1Q02410 837 aa3.29□□□□□ -1.88
NCKAP1-203ENST00000471640 STAT4Q14765 748 aa3.29□□□□□ -1.88
NCKAP1-203ENST00000471640 ANO4Q32M45 955 aa3.29□□□□□ -1.88
NCKAP1-203ENST00000471640 DRICH1Q6PGQ1 229 aaPredicted RBP3.29□□□□□ -1.88
NCKAP1-203ENST00000471640 FAM180AQ6UWF9 173 aa3.29□□□□□ -1.88
NCKAP1-203ENST00000471640 BTNL9Q6UXG8 535 aa3.29□□□□□ -1.88
NCKAP1-203ENST00000471640 GPRIN1Q7Z2K8 1008 aa3.29□□□□□ -1.88
NCKAP1-203ENST00000471640 SPATS2Q86XZ4 545 aaKnown RBP3.29□□□□□ -1.88
NCKAP1-203ENST00000471640 SYNE4Q8N205 404 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms