RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 NIPA1Q7RTP0 329 aa7.72□□□□□ -1.17
HDAC1-204ENST00000471488 MIER3Q7Z3K6 550 aa7.72□□□□□ -1.17
HDAC1-204ENST00000471488 ZNF710Q8N1W2 664 aa7.72□□□□□ -1.17
HDAC1-204ENST00000471488 NETO1Q8TDF5 533 aa7.72□□□□□ -1.17
HDAC1-204ENST00000471488 TMEM175Q9BSA9 504 aa7.72□□□□□ -1.17
HDAC1-204ENST00000471488 TRIM6Q9C030 488 aaPredicted RBP7.72□□□□□ -1.17
HDAC1-204ENST00000471488 SEMA4GQ9NTN9 838 aa7.72□□□□□ -1.17
HDAC1-204ENST00000471488 KANSL3Q9P2N6 904 aa7.72□□□□□ -1.17
HDAC1-204ENST00000471488 CDH7Q9ULB5 785 aa7.72□□□□□ -1.17
HDAC1-204ENST00000471488 RBM8AQ9Y5S9 174 aaKnown RBP7.72□□□□□ -1.17
HDAC1-204ENST00000471488 CFAP47Q6ZTR5 3102 aa7.72□□□□□ -1.17
HDAC1-204ENST00000471488 MAP1BP46821 2468 aaKnown RBP7.72□□□□□ -1.17
HDAC1-204ENST00000471488 OTOGLQ3ZCN5 2332 aa7.72□□□□□ -1.17
HDAC1-204ENST00000471488 CACNA1IQ9P0X4 2223 aa7.71□□□□□ -1.17
HDAC1-204ENST00000471488 IGLV3-22A0A075B6J6 115 aa7.71□□□□□ -1.18
HDAC1-204ENST00000471488 ANHXE9PGG2 379 aa7.71□□□□□ -1.18
HDAC1-204ENST00000471488 SLC30A4O14863 429 aa7.71□□□□□ -1.18
HDAC1-204ENST00000471488 LILRB3O75022 631 aa7.71□□□□□ -1.18
HDAC1-204ENST00000471488 TADA2AO75478 443 aa7.71□□□□□ -1.18
HDAC1-204ENST00000471488 ERLIN2O94905 339 aa7.71□□□□□ -1.18
HDAC1-204ENST00000471488 SCNN1GP51170 649 aa7.71□□□□□ -1.18
HDAC1-204ENST00000471488 NRLP54845 237 aa7.71□□□□□ -1.18
HDAC1-204ENST00000471488 NUCB1Q02818 461 aa7.71□□□□□ -1.18
HDAC1-204ENST00000471488 SRSF5Q13243 272 aaKnown RBP7.71□□□□□ -1.18
HDAC1-204ENST00000471488 GRM2Q14416 872 aa7.71□□□□□ -1.18
HDAC1-204ENST00000471488 RTN1Q16799 776 aa7.71□□□□□ -1.18
HDAC1-204ENST00000471488 LRCH2Q5VUJ6 765 aa7.71□□□□□ -1.18
HDAC1-204ENST00000471488 PLA2G4FQ68DD2 849 aa7.71□□□□□ -1.18
HDAC1-204ENST00000471488 LAIR1Q6GTX8 287 aa7.71□□□□□ -1.18
HDAC1-204ENST00000471488 PPP1R18Q6NYC8 613 aa7.71□□□□□ -1.18
HDAC1-204ENST00000471488 PRR23CQ6ZRP0 262 aa7.71□□□□□ -1.18
HDAC1-204ENST00000471488 CEP68Q76N32 757 aa7.71□□□□□ -1.18
HDAC1-204ENST00000471488 LINC01465Q8N7H1 131 aa7.71□□□□□ -1.18
HDAC1-204ENST00000471488 ZBTB44Q8NCP5 570 aa7.71□□□□□ -1.18
HDAC1-204ENST00000471488 ITFG1Q8TB96 612 aa7.71□□□□□ -1.18
HDAC1-204ENST00000471488 FGF13Q92913 245 aa7.71□□□□□ -1.18
HDAC1-204ENST00000471488 MCRS1Q96EZ8 462 aa7.71□□□□□ -1.18
HDAC1-204ENST00000471488 TMEM87BQ96K49 555 aa7.71□□□□□ -1.18
HDAC1-204ENST00000471488 ZFP42Q96MM3 310 aa7.71□□□□□ -1.18
HDAC1-204ENST00000471488 TCEANC2Q96MN5 208 aa7.71□□□□□ -1.18
HDAC1-204ENST00000471488 GAD1Q99259 594 aa7.71□□□□□ -1.18
HDAC1-204ENST00000471488 COLEC11Q9BWP8 271 aa7.71□□□□□ -1.18
HDAC1-204ENST00000471488 TEKT3Q9BXF9 490 aa7.71□□□□□ -1.18
HDAC1-204ENST00000471488 SLKQ9H2G2 1235 aaPredicted RBP7.71□□□□□ -1.18
HDAC1-204ENST00000471488 OSBPL3Q9H4L5 887 aa7.71□□□□□ -1.18
HDAC1-204ENST00000471488 PLEKHA4Q9H4M7 779 aa7.71□□□□□ -1.18
HDAC1-204ENST00000471488 MARCH5Q9NX47 278 aa7.71□□□□□ -1.18
HDAC1-204ENST00000471488 ZDHHC7Q9NXF8 308 aa7.71□□□□□ -1.18
HDAC1-204ENST00000471488 CACNG4Q9UBN1 327 aa7.71□□□□□ -1.18
HDAC1-204ENST00000471488 MRPS17Q9Y2R5 130 aaKnown RBP7.71□□□□□ -1.18
HDAC1-204ENST00000471488 HES2Q9Y543 173 aa7.71□□□□□ -1.18
HDAC1-204ENST00000471488 CNTNAP5Q8WYK1 1306 aa7.71□□□□□ -1.18
HDAC1-204ENST00000471488 MYH15Q9Y2K3 1946 aa7.7□□□□□ -1.18
HDAC1-204ENST00000471488 ARL5CA6NH57 179 aa7.7□□□□□ -1.18
HDAC1-204ENST00000471488 GOLGA8AA7E2F4 631 aa7.7□□□□□ -1.18
HDAC1-204ENST00000471488 GOLGA8BA8MQT2 603 aa7.7□□□□□ -1.18
HDAC1-204ENST00000471488 XYLBO75191 536 aa7.7□□□□□ -1.18
HDAC1-204ENST00000471488 ZMYND10O75800 440 aa7.7□□□□□ -1.18
HDAC1-204ENST00000471488 IGHDP01880 384 aa7.7□□□□□ -1.18
HDAC1-204ENST00000471488 C8AP07357 584 aa7.7□□□□□ -1.18
HDAC1-204ENST00000471488 HOXB3P14651 431 aaPredicted RBP7.7□□□□□ -1.18
HDAC1-204ENST00000471488 MAGEA9P43362 315 aa7.7□□□□□ -1.18
HDAC1-204ENST00000471488 FGD1P98174 961 aa7.7□□□□□ -1.18
HDAC1-204ENST00000471488 CDC42EP1Q00587 391 aa7.7□□□□□ -1.18
HDAC1-204ENST00000471488 DSG1Q02413 1049 aa7.7□□□□□ -1.18
HDAC1-204ENST00000471488 USP41Q3LFD5 358 aa7.7□□□□□ -1.18
HDAC1-204ENST00000471488 N4BP2L1Q5TBK1 243 aaPredicted RBP7.7□□□□□ -1.18
HDAC1-204ENST00000471488 FUT10Q6P4F1 479 aa7.7□□□□□ -1.18
HDAC1-204ENST00000471488 ZNF410Q86VK4 478 aa7.7□□□□□ -1.18
HDAC1-204ENST00000471488 COLGALT2Q8IYK4 626 aa7.7□□□□□ -1.18
HDAC1-204ENST00000471488 REXO1Q8N1G1 1221 aaKnown RBP7.7□□□□□ -1.18
HDAC1-204ENST00000471488 C12orf50Q8NA57 414 aaPredicted RBP7.7□□□□□ -1.18
HDAC1-204ENST00000471488 SLC7A14Q8TBB6 771 aa7.7□□□□□ -1.18
HDAC1-204ENST00000471488 RSPH1Q8WYR4 309 aa7.7□□□□□ -1.18
HDAC1-204ENST00000471488 TMEM143Q96AN5 459 aa7.7□□□□□ -1.18
HDAC1-204ENST00000471488 CPB2Q96IY4 423 aa7.7□□□□□ -1.18
HDAC1-204ENST00000471488 CCDC136Q96JN2 1154 aa7.7□□□□□ -1.18
HDAC1-204ENST00000471488 GPR62Q9BZJ7 368 aa7.7□□□□□ -1.18
HDAC1-204ENST00000471488 GLT8D2Q9H1C3 349 aa7.7□□□□□ -1.18
HDAC1-204ENST00000471488 UNC45AQ9H3U1 944 aa7.7□□□□□ -1.18
HDAC1-204ENST00000471488 C6orf50Q9HD87 102 aa7.7□□□□□ -1.18
HDAC1-204ENST00000471488 AGPAT5Q9NUQ2 364 aa7.7□□□□□ -1.18
HDAC1-204ENST00000471488 RBM28Q9NW13 759 aaKnown RBP7.7□□□□□ -1.18
HDAC1-204ENST00000471488 HCFC1R1Q9NWW0 138 aa7.7□□□□□ -1.18
HDAC1-204ENST00000471488 BARHL2Q9NY43 387 aa7.7□□□□□ -1.18
HDAC1-204ENST00000471488 KLK14Q9P0G3 267 aa7.7□□□□□ -1.18
HDAC1-204ENST00000471488 PARP2Q9UGN5 583 aa7.7□□□□□ -1.18
HDAC1-204ENST00000471488 ZFP37Q9Y6Q3 630 aaPredicted RBP7.7□□□□□ -1.18
HDAC1-204ENST00000471488 GPR179Q6PRD1 2367 aa7.7□□□□□ -1.18
HDAC1-204ENST00000471488 CNTNAP2Q9UHC6 1331 aa7.7□□□□□ -1.18
HDAC1-204ENST00000471488 FANCMQ8IYD8 2048 aa7.69□□□□□ -1.18
HDAC1-204ENST00000471488 CHURC1-FNTBB4DL54 471 aa7.69□□□□□ -1.18
HDAC1-204ENST00000471488 ADAMTS3O15072 1205 aa7.69□□□□□ -1.18
HDAC1-204ENST00000471488 AXIN1O15169 862 aa7.69□□□□□ -1.18
HDAC1-204ENST00000471488 MSH4O15457 936 aa7.69□□□□□ -1.18
HDAC1-204ENST00000471488 ZBTB43O43298 467 aa7.69□□□□□ -1.18
HDAC1-204ENST00000471488 LILRB5O75023 590 aa7.69□□□□□ -1.18
HDAC1-204ENST00000471488 ZNF623O75123 536 aa7.69□□□□□ -1.18
HDAC1-204ENST00000471488 RETP07949 1114 aa7.69□□□□□ -1.18
HDAC1-204ENST00000471488 GSPT1P15170 499 aaKnown RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms