RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, human

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SND1-208	ENST00000470463	MARK3	P27448	753 aa		11.94	□□□□□ -0.5
SND1-208	ENST00000470463	STAT1	P42224	750 aa		11.94	□□□□□ -0.5
SND1-208	ENST00000470463	PHKA2	P46019	1235 aa		11.94	□□□□□ -0.5
SND1-208	ENST00000470463	KLK7	P49862	253 aa		11.94	□□□□□ -0.5
SND1-208	ENST00000470463	CPT1A	P50416	773 aa		11.94	□□□□□ -0.5
SND1-208	ENST00000470463	POU5F1	Q01860	360 aa	Known RBP	11.94	□□□□□ -0.5
SND1-208	ENST00000470463	LAMTOR4	Q0VGL1	99 aa		11.94	□□□□□ -0.5
SND1-208	ENST00000470463	CAPS	Q13938	189 aa		11.94	□□□□□ -0.5
SND1-208	ENST00000470463	PCBP1	Q15365	356 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
SND1-208	ENST00000470463	SURF1	Q15526	300 aa		11.94	□□□□□ -0.5
SND1-208	ENST00000470463	KRT39	Q6A163	491 aa		11.94	□□□□□ -0.5
SND1-208	ENST00000470463	TRIM65	Q6PJ69	517 aa		11.94	□□□□□ -0.5
SND1-208	ENST00000470463	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.94	□□□□□ -0.5
SND1-208	ENST00000470463	ASAP3	Q8TDY4	903 aa		11.94	□□□□□ -0.5
SND1-208	ENST00000470463	AFG1L	Q8WV93	481 aa		11.94	□□□□□ -0.5
SND1-208	ENST00000470463	PRPF31	Q8WWY3	499 aa	Known RBP	11.94	□□□□□ -0.5
SND1-208	ENST00000470463	COPS5	Q92905	334 aa		11.94	□□□□□ -0.5
SND1-208	ENST00000470463	CRACR2A	Q9BSW2	395 aa		11.94	□□□□□ -0.5
SND1-208	ENST00000470463	KATNAL1	Q9BW62	490 aa		11.94	□□□□□ -0.5
SND1-208	ENST00000470463	PCIF1	Q9H4Z3	704 aa		11.94	□□□□□ -0.5
SND1-208	ENST00000470463	TMEM8A	Q9HCN3	771 aa		11.94	□□□□□ -0.5
SND1-208	ENST00000470463	SUCLA2	Q9P2R7	463 aa	Predicted RBP	11.94	□□□□□ -0.5
SND1-208	ENST00000470463	APEX2	Q9UBZ4	518 aa		11.94	□□□□□ -0.5
SND1-208	ENST00000470463	AGO2	Q9UKV8	859 aa	Known RBP	11.94	□□□□□ -0.5
SND1-208	ENST00000470463	ATP8B3	O60423	1300 aa		11.93	□□□□□ -0.5
SND1-208	ENST00000470463	ADGRA3	Q8IWK6	1321 aa		11.93	□□□□□ -0.5
SND1-208	ENST00000470463	ZBTB42	B2RXF5	422 aa		11.93	□□□□□ -0.5
SND1-208	ENST00000470463	ANKRD63	C9JTQ0	380 aa		11.93	□□□□□ -0.5
SND1-208	ENST00000470463	CLDN3	O15551	220 aa		11.93	□□□□□ -0.5
SND1-208	ENST00000470463	AKR1B10	O60218	316 aa		11.93	□□□□□ -0.5
SND1-208	ENST00000470463	TOM1L1	O75674	476 aa		11.93	□□□□□ -0.5
SND1-208	ENST00000470463	MMP3	P08254	477 aa		11.93	□□□□□ -0.5
SND1-208	ENST00000470463	SMPD1	P17405	629 aa		11.93	□□□□□ -0.5
SND1-208	ENST00000470463	ADSS	P30520	456 aa		11.93	□□□□□ -0.5
SND1-208	ENST00000470463	PRKCI	P41743	596 aa		11.93	□□□□□ -0.5
SND1-208	ENST00000470463	MXI1	P50539	228 aa		11.93	□□□□□ -0.5
SND1-208	ENST00000470463	CYP24A1	Q07973	514 aa		11.93	□□□□□ -0.5
SND1-208	ENST00000470463	KLHL30	Q0D2K2	578 aa		11.93	□□□□□ -0.5
SND1-208	ENST00000470463	KIF22	Q14807	665 aa		11.93	□□□□□ -0.5
SND1-208	ENST00000470463	ASIC2	Q16515	512 aa		11.93	□□□□□ -0.5
SND1-208	ENST00000470463	TDRD12	Q587J7	1177 aa	Known RBP	11.93	□□□□□ -0.5
SND1-208	ENST00000470463	EFCAB12	Q6NXP0	572 aa		11.93	□□□□□ -0.5
SND1-208	ENST00000470463	ENOSF1	Q7L5Y1	443 aa		11.93	□□□□□ -0.5
SND1-208	ENST00000470463	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	11.93	□□□□□ -0.5
SND1-208	ENST00000470463	KIAA1328	Q86T90	577 aa		11.93	□□□□□ -0.5
SND1-208	ENST00000470463	CCDC155	Q8N6L0	562 aa		11.93	□□□□□ -0.5
SND1-208	ENST00000470463	RDH13	Q8NBN7	331 aa		11.93	□□□□□ -0.5
SND1-208	ENST00000470463	RNF149	Q8NC42	400 aa		11.93	□□□□□ -0.5
SND1-208	ENST00000470463	PARD3B	Q8TEW8	1205 aa		11.93	□□□□□ -0.5
SND1-208	ENST00000470463	FNBP1	Q96RU3	617 aa		11.93	□□□□□ -0.5
SND1-208	ENST00000470463	MAP7D2	Q96T17	732 aa		11.93	□□□□□ -0.5
SND1-208	ENST00000470463	CHP1	Q99653	195 aa		11.93	□□□□□ -0.5
SND1-208	ENST00000470463	C16orf70	Q9BSU1	422 aa		11.93	□□□□□ -0.5
SND1-208	ENST00000470463	KIFC3	Q9BVG8	833 aa		11.93	□□□□□ -0.5
SND1-208	ENST00000470463	STK33	Q9BYT3	514 aa		11.93	□□□□□ -0.5
SND1-208	ENST00000470463	AP5M1	Q9H0R1	490 aa		11.93	□□□□□ -0.5
SND1-208	ENST00000470463	SUGCT	Q9HAC7	445 aa		11.93	□□□□□ -0.5
SND1-208	ENST00000470463	NLRC4	Q9NPP4	1024 aa		11.93	□□□□□ -0.5
SND1-208	ENST00000470463	COQ4	Q9Y3A0	265 aa		11.93	□□□□□ -0.5
SND1-208	ENST00000470463	R3HCC1	Q9Y3T6	440 aa	Known RBP	11.93	□□□□□ -0.5
SND1-208	ENST00000470463	MCM3AP	O60318	1980 aa		11.92	□□□□□ -0.5
SND1-208	ENST00000470463		A0A0B4J269	797 aa		11.92	□□□□□ -0.5
SND1-208	ENST00000470463	RBAK-RBAKDN	I3L0D1	243 aa		11.92	□□□□□ -0.5
SND1-208	ENST00000470463	ACKR2	O00590	384 aa		11.92	□□□□□ -0.5
SND1-208	ENST00000470463	EPHB6	O15197	1021 aa		11.92	□□□□□ -0.5
SND1-208	ENST00000470463	ZEB2	O60315	1214 aa		11.92	□□□□□ -0.5
SND1-208	ENST00000470463	C22orf31	O95567	290 aa		11.92	□□□□□ -0.5
SND1-208	ENST00000470463	INSRR	P14616	1297 aa		11.92	□□□□□ -0.5
SND1-208	ENST00000470463	SLC9A1	P19634	815 aa		11.92	□□□□□ -0.5
SND1-208	ENST00000470463	CASQ1	P31415	396 aa		11.92	□□□□□ -0.5
SND1-208	ENST00000470463	KIF11	P52732	1056 aa		11.92	□□□□□ -0.5
SND1-208	ENST00000470463	VAV2	P52735	878 aa		11.92	□□□□□ -0.5
SND1-208	ENST00000470463	CLDN10	P78369	228 aa		11.92	□□□□□ -0.5
SND1-208	ENST00000470463	KIF5A	Q12840	1032 aa		11.92	□□□□□ -0.5
SND1-208	ENST00000470463	CRHR2	Q13324	411 aa		11.92	□□□□□ -0.5
SND1-208	ENST00000470463	RAPGEF1	Q13905	1077 aa		11.92	□□□□□ -0.5
SND1-208	ENST00000470463	MTF1	Q14872	753 aa		11.92	□□□□□ -0.5
SND1-208	ENST00000470463	PSMD6	Q15008	389 aa		11.92	□□□□□ -0.5
SND1-208	ENST00000470463	FAM187B	Q17R55	369 aa		11.92	□□□□□ -0.5
SND1-208	ENST00000470463	MFSD14C	Q5VZR4	134 aa		11.92	□□□□□ -0.5
SND1-208	ENST00000470463	TAS1R3	Q7RTX0	852 aa		11.92	□□□□□ -0.5
SND1-208	ENST00000470463	ZNF410	Q86VK4	478 aa		11.92	□□□□□ -0.5
SND1-208	ENST00000470463	TRIM50	Q86XT4	487 aa		11.92	□□□□□ -0.5
SND1-208	ENST00000470463	ZNF592	Q92610	1267 aa		11.92	□□□□□ -0.5
SND1-208	ENST00000470463	INTS2	Q9H0H0	1204 aa	Known RBP	11.92	□□□□□ -0.5
SND1-208	ENST00000470463	CCDC113	Q9H0I3	377 aa		11.92	□□□□□ -0.5
SND1-208	ENST00000470463	PRMT7	Q9NVM4	692 aa	Predicted RBP	11.92	□□□□□ -0.5
SND1-208	ENST00000470463	GJD2	Q9UKL4	321 aa		11.92	□□□□□ -0.5
SND1-208	ENST00000470463	NRCAM	Q92823	1304 aa		11.91	□□□□□ -0.5
SND1-208	ENST00000470463	MSC	O60682	206 aa		11.91	□□□□□ -0.5
SND1-208	ENST00000470463	RPLP2	P05387	115 aa	Known RBP	11.91	□□□□□ -0.5
SND1-208	ENST00000470463	PRKCB	P05771	671 aa		11.91	□□□□□ -0.5
SND1-208	ENST00000470463	ZNF865	P0CJ78	1059 aa	Predicted RBP	11.91	□□□□□ -0.5
SND1-208	ENST00000470463	GNAT1	P11488	350 aa		11.91	□□□□□ -0.5
SND1-208	ENST00000470463	AKR1A1	P14550	325 aa		11.91	□□□□□ -0.5
SND1-208	ENST00000470463	KLRC1	P26715	233 aa		11.91	□□□□□ -0.5
SND1-208	ENST00000470463	SOX5	P35711	763 aa		11.91	□□□□□ -0.5
SND1-208	ENST00000470463	EIF4A3	P38919	411 aa	Known RBP	11.91	□□□□□ -0.5
SND1-208	ENST00000470463	MATR3	P43243	847 aa	Known RBP eCLIP	11.91	□□□□□ -0.5
SND1-208	ENST00000470463	MFAP3	P55082	362 aa		11.91	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms