RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 RMND1Q9NWS8 449 aa11.59□□□□□ -0.55
SMC1A-206ENST00000470241 KIAA1468Q9P260 1216 aa11.59□□□□□ -0.55
SMC1A-206ENST00000470241 GDAQ9Y2T3 454 aa11.59□□□□□ -0.55
SMC1A-206ENST00000470241 ZMYM2Q9UBW7 1377 aa11.58□□□□□ -0.56
SMC1A-206ENST00000470241 TISP43B9A030 160 aa11.58□□□□□ -0.56
SMC1A-206ENST00000470241 ANKRD63C9JTQ0 380 aa11.58□□□□□ -0.56
SMC1A-206ENST00000470241 N4BP3O15049 544 aa11.58□□□□□ -0.56
SMC1A-206ENST00000470241 EIF3DO15371 548 aaKnown RBP eCLIP11.58□□□□□ -0.56
SMC1A-206ENST00000470241 EFCAB14O75071 495 aa11.58□□□□□ -0.56
SMC1A-206ENST00000470241 BMP6P22004 513 aa11.58□□□□□ -0.56
SMC1A-206ENST00000470241 DEFB103AP81534 67 aa11.58□□□□□ -0.56
SMC1A-206ENST00000470241 MORC3Q14149 939 aa11.58□□□□□ -0.56
SMC1A-206ENST00000470241 CHRDL2Q6WN34 429 aa11.58□□□□□ -0.56
SMC1A-206ENST00000470241 RBM43Q6ZSC3 357 aaKnown RBP11.58□□□□□ -0.56
SMC1A-206ENST00000470241 STXBP4Q6ZWJ1 553 aa11.58□□□□□ -0.56
SMC1A-206ENST00000470241 SLC24A5Q71RS6 500 aa11.58□□□□□ -0.56
SMC1A-206ENST00000470241 SMYD4Q8IYR2 804 aaPredicted RBP11.58□□□□□ -0.56
SMC1A-206ENST00000470241 CRIPAKQ8N1N5 446 aa11.58□□□□□ -0.56
SMC1A-206ENST00000470241 ZBTB45Q96K62 511 aaPredicted RBP11.58□□□□□ -0.56
SMC1A-206ENST00000470241 C1orf112Q9NSG2 853 aa11.58□□□□□ -0.56
SMC1A-206ENST00000470241 FAM105AQ9NUU6 356 aa11.58□□□□□ -0.56
SMC1A-206ENST00000470241 TMEM63CQ9P1W3 806 aa11.58□□□□□ -0.56
SMC1A-206ENST00000470241 TNFSF13BQ9Y275 285 aa11.58□□□□□ -0.56
SMC1A-206ENST00000470241 UBE4BO95155 1302 aa11.58□□□□□ -0.56
SMC1A-206ENST00000470241 TET1Q8NFU7 2136 aa11.57□□□□□ -0.56
SMC1A-206ENST00000470241 A0A0U1RQF3 1178 aa11.57□□□□□ -0.56
SMC1A-206ENST00000470241 ZBBXA8MT70 800 aa11.57□□□□□ -0.56
SMC1A-206ENST00000470241 BIN1O00499 593 aa11.57□□□□□ -0.56
SMC1A-206ENST00000470241 HNRNPDLO14979 420 aaKnown RBP11.57□□□□□ -0.56
SMC1A-206ENST00000470241 TGFB1I1O43294 461 aa11.57□□□□□ -0.56
SMC1A-206ENST00000470241 ZNF623O75123 536 aa11.57□□□□□ -0.56
SMC1A-206ENST00000470241 TOM1L1O75674 476 aa11.57□□□□□ -0.56
SMC1A-206ENST00000470241 NPTXRO95502 500 aa11.57□□□□□ -0.56
SMC1A-206ENST00000470241 ATF7P17544 494 aaPredicted RBP11.57□□□□□ -0.56
SMC1A-206ENST00000470241 LIG4P49917 911 aa11.57□□□□□ -0.56
SMC1A-206ENST00000470241 TMEM132AQ24JP5 1023 aa11.57□□□□□ -0.56
SMC1A-206ENST00000470241 KLHL40Q2TBA0 621 aa11.57□□□□□ -0.56
SMC1A-206ENST00000470241 CCDC183Q5T5S1 534 aa11.57□□□□□ -0.56
SMC1A-206ENST00000470241 ZNF658Q5TYW1 1059 aaPredicted RBP11.57□□□□□ -0.56
SMC1A-206ENST00000470241 ISM2Q6H9L7 571 aa11.57□□□□□ -0.56
SMC1A-206ENST00000470241 SLC27A1Q6PCB7 646 aa11.57□□□□□ -0.56
SMC1A-206ENST00000470241 MPZL3Q6UWV2 235 aa11.57□□□□□ -0.56
SMC1A-206ENST00000470241 TMCO2Q7Z6W1 182 aaPredicted RBP11.57□□□□□ -0.56
SMC1A-206ENST00000470241 ZNF598Q86UK7 904 aaKnown RBP11.57□□□□□ -0.56
SMC1A-206ENST00000470241 ECHDC2Q86YB7 292 aa11.57□□□□□ -0.56
SMC1A-206ENST00000470241 NELFCDQ8IXH7 590 aa11.57□□□□□ -0.56
SMC1A-206ENST00000470241 MYOCDQ8IZQ8 938 aa11.57□□□□□ -0.56
SMC1A-206ENST00000470241 SMG8Q8ND04 991 aaKnown RBP11.57□□□□□ -0.56
SMC1A-206ENST00000470241 BICD1Q96G01 975 aa11.57□□□□□ -0.56
SMC1A-206ENST00000470241 RNPC3Q96LT9 517 aaKnown RBP11.57□□□□□ -0.56
SMC1A-206ENST00000470241 HAPLN2Q9GZV7 340 aa11.57□□□□□ -0.56
SMC1A-206ENST00000470241 CDT1Q9H211 546 aa11.57□□□□□ -0.56
SMC1A-206ENST00000470241 TMEM206Q9H813 350 aa11.57□□□□□ -0.56
SMC1A-206ENST00000470241 EXOC7Q9UPT5 735 aa11.57□□□□□ -0.56
SMC1A-206ENST00000470241 MAPK8IP1Q9UQF2 711 aa11.57□□□□□ -0.56
SMC1A-206ENST00000470241 PCDHB2Q9Y5E7 798 aa11.57□□□□□ -0.56
SMC1A-206ENST00000470241 STYXL1Q9Y6J8 313 aa11.57□□□□□ -0.56
SMC1A-206ENST00000470241 AMHP03971 560 aa11.56□□□□□ -0.56
SMC1A-206ENST00000470241 IBSPP21815 317 aaPredicted RBP11.56□□□□□ -0.56
SMC1A-206ENST00000470241 ADSSP30520 456 aa11.56□□□□□ -0.56
SMC1A-206ENST00000470241 KCNJ6P48051 423 aa11.56□□□□□ -0.56
SMC1A-206ENST00000470241 RAB27AP51159 221 aa11.56□□□□□ -0.56
SMC1A-206ENST00000470241 MCL1Q07820 350 aa11.56□□□□□ -0.56
SMC1A-206ENST00000470241 KNOP1Q1ED39 458 aaKnown RBP11.56□□□□□ -0.56
SMC1A-206ENST00000470241 DCAF4L1Q3SXM0 396 aa11.56□□□□□ -0.56
SMC1A-206ENST00000470241 ZNF568Q3ZCX4 644 aa11.56□□□□□ -0.56
SMC1A-206ENST00000470241 COBLL1Q53SF7 1204 aa11.56□□□□□ -0.56
SMC1A-206ENST00000470241 PRPF38BQ5VTL8 546 aaKnown RBP11.56□□□□□ -0.56
SMC1A-206ENST00000470241 CAVIN1Q6NZI2 390 aaKnown RBP11.56□□□□□ -0.56
SMC1A-206ENST00000470241 MRPL10Q7Z7H8 261 aaKnown RBP11.56□□□□□ -0.56
SMC1A-206ENST00000470241 ZBTB33Q86T24 672 aa11.56□□□□□ -0.56
SMC1A-206ENST00000470241 SYCP3Q8IZU3 236 aa11.56□□□□□ -0.56
SMC1A-206ENST00000470241 GUF1Q8N442 669 aaKnown RBP11.56□□□□□ -0.56
SMC1A-206ENST00000470241 TRIML1Q8N9V2 468 aa11.56□□□□□ -0.56
SMC1A-206ENST00000470241 TOP1MTQ969P6 601 aa11.56□□□□□ -0.56
SMC1A-206ENST00000470241 MTIF3Q9H2K0 278 aaKnown RBP11.56□□□□□ -0.56
SMC1A-206ENST00000470241 RNF39Q9H2S5 420 aa11.56□□□□□ -0.56
SMC1A-206ENST00000470241 KCTD10Q9H3F6 313 aa11.56□□□□□ -0.56
SMC1A-206ENST00000470241 NXF3Q9H4D5 531 aaKnown RBP11.56□□□□□ -0.56
SMC1A-206ENST00000470241 ELAC1Q9H777 363 aaKnown RBP11.56□□□□□ -0.56
SMC1A-206ENST00000470241 ANKFY1Q9P2R3 1169 aa11.56□□□□□ -0.56
SMC1A-206ENST00000470241 IPPQ9Y573 584 aa11.56□□□□□ -0.56
SMC1A-206ENST00000470241 SLC4A7Q9Y6M7 1214 aa11.56□□□□□ -0.56
SMC1A-206ENST00000470241 A0A0B4J269 797 aa11.55□□□□□ -0.56
SMC1A-206ENST00000470241 MEIS3P2A8K0S8 358 aa11.55□□□□□ -0.56
SMC1A-206ENST00000470241 PPP1R3GB7ZBB8 358 aa11.55□□□□□ -0.56
SMC1A-206ENST00000470241 CLDN3O15551 220 aa11.55□□□□□ -0.56
SMC1A-206ENST00000470241 MCF2P10911 925 aa11.55□□□□□ -0.56
SMC1A-206ENST00000470241 SKIP12755 728 aa11.55□□□□□ -0.56
SMC1A-206ENST00000470241 CD44P16070 742 aaKnown RBP11.55□□□□□ -0.56
SMC1A-206ENST00000470241 PRCPP42785 496 aa11.55□□□□□ -0.56
SMC1A-206ENST00000470241 NOLC1Q14978 699 aaKnown RBP eCLIP11.55□□□□□ -0.56
SMC1A-206ENST00000470241 FAM109BQ6ICB4 259 aaPredicted RBP11.55□□□□□ -0.56
SMC1A-206ENST00000470241 AGMOQ6ZNB7 445 aa11.55□□□□□ -0.56
SMC1A-206ENST00000470241 NPAS4Q8IUM7 802 aa11.55□□□□□ -0.56
SMC1A-206ENST00000470241 TDHQ8IZJ6 230 aa11.55□□□□□ -0.56
SMC1A-206ENST00000470241 ADSSL1Q8N142 457 aa11.55□□□□□ -0.56
SMC1A-206ENST00000470241 CEP120Q8N960 986 aa11.55□□□□□ -0.56
SMC1A-206ENST00000470241 PHOSPHO2Q8TCD6 241 aa11.55□□□□□ -0.56
SMC1A-206ENST00000470241 LPPQ93052 612 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms