RNA–Protein interactions for RNA: ENST00000469930.1

BRAF-202, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene BRAF, Length 1,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-202ENST00000469930 PADI3Q9ULW8 664 aa22.78■■□□□ 1.24
BRAF-202ENST00000469930 ST3GAL5Q9UNP4 418 aa22.78■■□□□ 1.24
BRAF-202ENST00000469930 ALPK3Q96L96 1907 aa22.77■■□□□ 1.24
BRAF-202ENST00000469930 TRIM43BA6NCK2 446 aa22.77■■□□□ 1.24
BRAF-202ENST00000469930 IKBKBO14920 756 aa22.77■■□□□ 1.24
BRAF-202ENST00000469930 HNRNPDLO14979 420 aaKnown RBP22.77■■□□□ 1.24
BRAF-202ENST00000469930 N4BP3O15049 544 aa22.77■■□□□ 1.24
BRAF-202ENST00000469930 CSDE1O75534 798 aaKnown RBP22.77■■□□□ 1.24
BRAF-202ENST00000469930 LIG4P49917 911 aa22.77■■□□□ 1.24
BRAF-202ENST00000469930 HSP90AA2PQ14568 343 aaPredicted RBP22.77■■□□□ 1.24
BRAF-202ENST00000469930 PLEKHG4Q58EX7 1191 aa22.77■■□□□ 1.24
BRAF-202ENST00000469930 ATF7IP2Q5U623 682 aa22.77■■□□□ 1.24
BRAF-202ENST00000469930 ANKRD40Q6AI12 368 aa22.77■■□□□ 1.24
BRAF-202ENST00000469930 APBB2Q92870 758 aa22.77■■□□□ 1.24
BRAF-202ENST00000469930 TRIM43Q96BQ3 446 aaPredicted RBP22.77■■□□□ 1.24
BRAF-202ENST00000469930 ANKRD63C9JTQ0 380 aa22.76■■□□□ 1.23
BRAF-202ENST00000469930 NBNO60934 754 aa22.76■■□□□ 1.23
BRAF-202ENST00000469930 GHRP10912 638 aa22.76■■□□□ 1.23
BRAF-202ENST00000469930 RPL13P26373 211 aaKnown RBP22.76■■□□□ 1.23
BRAF-202ENST00000469930 CYP2C18P33260 490 aa22.76■■□□□ 1.23
BRAF-202ENST00000469930 ZNF165P49910 485 aa22.76■■□□□ 1.23
BRAF-202ENST00000469930 FKBP3Q00688 224 aaKnown RBP22.76■■□□□ 1.23
BRAF-202ENST00000469930 POU5F1Q01860 360 aaKnown RBP22.76■■□□□ 1.23
BRAF-202ENST00000469930 MCL1Q07820 350 aa22.76■■□□□ 1.23
BRAF-202ENST00000469930 PAK2Q13177 524 aa22.76■■□□□ 1.23
BRAF-202ENST00000469930 DSC3Q14574 896 aa22.76■■□□□ 1.23
BRAF-202ENST00000469930 KLHL10Q6JEL2 608 aa22.76■■□□□ 1.23
BRAF-202ENST00000469930 MFSD5Q6N075 450 aa22.76■■□□□ 1.23
BRAF-202ENST00000469930 NOTUMQ6P988 496 aa22.76■■□□□ 1.23
BRAF-202ENST00000469930 APBB1IPQ7Z5R6 666 aaPredicted RBP22.76■■□□□ 1.23
BRAF-202ENST00000469930 BICD1Q96G01 975 aa22.76■■□□□ 1.23
BRAF-202ENST00000469930 FTHL17Q9BXU8 183 aa22.76■■□□□ 1.23
BRAF-202ENST00000469930 CTNND2Q9UQB3 1225 aa22.76■■□□□ 1.23
BRAF-202ENST00000469930 UMODL1Q5DID0 1318 aa22.76■■□□□ 1.23
BRAF-202ENST00000469930 A0A0B4J269 797 aa22.75■■□□□ 1.23
BRAF-202ENST00000469930 TTLL13PA6NNM8 815 aa22.75■■□□□ 1.23
BRAF-202ENST00000469930 B4GALT5O43286 388 aa22.75■■□□□ 1.23
BRAF-202ENST00000469930 ADSSP30520 456 aa22.75■■□□□ 1.23
BRAF-202ENST00000469930 PMS1P54277 932 aaKnown RBP22.75■■□□□ 1.23
BRAF-202ENST00000469930 MCCD1P59942 119 aaPredicted RBP22.75■■□□□ 1.23
BRAF-202ENST00000469930 SPATA1Q5VX52 437 aa22.75■■□□□ 1.23
BRAF-202ENST00000469930 MPZL3Q6UWV2 235 aa22.75■■□□□ 1.23
BRAF-202ENST00000469930 FAM200AQ8TCP9 573 aa22.75■■□□□ 1.23
BRAF-202ENST00000469930 DUSP9Q99956 384 aaKnown RBP22.75■■□□□ 1.23
BRAF-202ENST00000469930 OSBPL7Q9BZF2 842 aa22.75■■□□□ 1.23
BRAF-202ENST00000469930 PPP1R12CQ9BZL4 782 aa22.75■■□□□ 1.23
BRAF-202ENST00000469930 PDZD7Q9H5P4 517 aa22.75■■□□□ 1.23
BRAF-202ENST00000469930 MAPK13O15264 365 aa22.74■■□□□ 1.23
BRAF-202ENST00000469930 CLDN3O15551 220 aa22.74■■□□□ 1.23
BRAF-202ENST00000469930 FGFR1OPO95684 399 aaKnown RBP22.74■■□□□ 1.23
BRAF-202ENST00000469930 LDHAP00338 332 aaKnown RBP22.74■■□□□ 1.23
BRAF-202ENST00000469930 PFKMP08237 780 aa22.74■■□□□ 1.23
BRAF-202ENST00000469930 MCF2P10911 925 aa22.74■■□□□ 1.23
BRAF-202ENST00000469930 RAG1P15918 1043 aa22.74■■□□□ 1.23
BRAF-202ENST00000469930 FGFR4P22455 802 aa22.74■■□□□ 1.23
BRAF-202ENST00000469930 CD52P31358 61 aa22.74■■□□□ 1.23
BRAF-202ENST00000469930 IQCB1Q15051 598 aa22.74■■□□□ 1.23
BRAF-202ENST00000469930 KYAT1Q16773 422 aa22.74■■□□□ 1.23
BRAF-202ENST00000469930 DCAF4L1Q3SXM0 396 aa22.74■■□□□ 1.23
BRAF-202ENST00000469930 NOC3LQ8WTT2 800 aaKnown RBP22.74■■□□□ 1.23
BRAF-202ENST00000469930 FBXL18Q96ME1 805 aa22.74■■□□□ 1.23
BRAF-202ENST00000469930 CEP63Q96MT8 703 aa22.74■■□□□ 1.23
BRAF-202ENST00000469930 KIAA1586Q9HCI6 787 aa22.74■■□□□ 1.23
BRAF-202ENST00000469930 SMTNL1A8MU46 457 aa22.73■■□□□ 1.23
BRAF-202ENST00000469930 NR3C1P04150 777 aa22.73■■□□□ 1.23
BRAF-202ENST00000469930 MYL5Q02045 173 aa22.73■■□□□ 1.23
BRAF-202ENST00000469930 NFX1Q12986 1120 aaKnown RBP22.73■■□□□ 1.23
BRAF-202ENST00000469930 NCAPHQ15003 741 aa22.73■■□□□ 1.23
BRAF-202ENST00000469930 SLC27A1Q6PCB7 646 aa22.73■■□□□ 1.23
BRAF-202ENST00000469930 TMEM199Q8N511 208 aa22.73■■□□□ 1.23
BRAF-202ENST00000469930 SEPT8Q92599 483 aa22.73■■□□□ 1.23
BRAF-202ENST00000469930 ADPGKQ9BRR6 497 aa22.73■■□□□ 1.23
BRAF-202ENST00000469930 MKNK1Q9BUB5 465 aa22.73■■□□□ 1.23
BRAF-202ENST00000469930 IFIH1Q9BYX4 1025 aaKnown RBP22.73■■□□□ 1.23
BRAF-202ENST00000469930 HAPLN2Q9GZV7 340 aa22.73■■□□□ 1.23
BRAF-202ENST00000469930 TMX1Q9H3N1 280 aa22.73■■□□□ 1.23
BRAF-202ENST00000469930 PRKAG2Q9UGJ0 569 aa22.73■■□□□ 1.23
BRAF-202ENST00000469930 TRIM49BA6NDI0 452 aa22.72■■□□□ 1.23
BRAF-202ENST00000469930 CETN3O15182 167 aa22.72■■□□□ 1.23
BRAF-202ENST00000469930 EVI5O60447 810 aa22.72■■□□□ 1.23
BRAF-202ENST00000469930 ZNF623O75123 536 aa22.72■■□□□ 1.23
BRAF-202ENST00000469930 ZSCAN20P17040 1043 aaPredicted RBP22.72■■□□□ 1.23
BRAF-202ENST00000469930 ITGB8P26012 769 aa22.72■■□□□ 1.23
BRAF-202ENST00000469930 CCL23P55773 120 aa22.72■■□□□ 1.23
BRAF-202ENST00000469930 ENPEPQ07075 957 aa22.72■■□□□ 1.23
BRAF-202ENST00000469930 ADAM9Q13443 819 aa22.72■■□□□ 1.23
BRAF-202ENST00000469930 EEF1DP3Q658K8 133 aa22.72■■□□□ 1.23
BRAF-202ENST00000469930 ARMCX5Q6P1M9 558 aa22.72■■□□□ 1.23
BRAF-202ENST00000469930 LRRC55Q6ZSA7 311 aa22.72■■□□□ 1.23
BRAF-202ENST00000469930 FILIP1Q7Z7B0 1213 aa22.72■■□□□ 1.23
BRAF-202ENST00000469930 RPUSD2Q8IZ73 545 aaKnown RBP22.72■■□□□ 1.23
BRAF-202ENST00000469930 CPB2Q96IY4 423 aa22.72■■□□□ 1.23
BRAF-202ENST00000469930 ZBTB45Q96K62 511 aaPredicted RBP22.72■■□□□ 1.23
BRAF-202ENST00000469930 CDT1Q9H211 546 aa22.72■■□□□ 1.23
BRAF-202ENST00000469930 IKZF4Q9H2S9 585 aa22.72■■□□□ 1.23
BRAF-202ENST00000469930 PIN4Q9Y237 131 aaKnown RBP22.72■■□□□ 1.23
BRAF-202ENST00000469930 USP20Q9Y2K6 914 aa22.72■■□□□ 1.23
BRAF-202ENST00000469930 TISP43B9A030 160 aa22.71■■□□□ 1.23
BRAF-202ENST00000469930 OGTO15294 1046 aa22.71■■□□□ 1.23
BRAF-202ENST00000469930 FAM189A1O60320 539 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms