RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 AP5M1Q9H0R1 490 aa7.57□□□□□ -1.2
PTCD3-208ENST00000469585 SMOC1Q9H4F8 434 aa7.57□□□□□ -1.2
PTCD3-208ENST00000469585 SMURF1Q9HCE7 757 aa7.57□□□□□ -1.2
PTCD3-208ENST00000469585 PALD1Q9ULE6 856 aa7.57□□□□□ -1.2
PTCD3-208ENST00000469585 LRRFIP2Q9Y608 721 aaKnown RBP7.57□□□□□ -1.2
PTCD3-208ENST00000469585 FER1L6Q2WGJ9 1857 aa7.56□□□□□ -1.2
PTCD3-208ENST00000469585 TIAM2Q8IVF5 1701 aa7.56□□□□□ -1.2
PTCD3-208ENST00000469585 FZD9O00144 591 aa7.56□□□□□ -1.2
PTCD3-208ENST00000469585 ABLIM1O14639 778 aa7.56□□□□□ -1.2
PTCD3-208ENST00000469585 TOMM70O94826 608 aa7.56□□□□□ -1.2
PTCD3-208ENST00000469585 IL15P40933 162 aaPredicted RBP7.56□□□□□ -1.2
PTCD3-208ENST00000469585 FOXO4P98177 505 aa7.56□□□□□ -1.2
PTCD3-208ENST00000469585 TMEM62Q0P6H9 643 aa7.56□□□□□ -1.2
PTCD3-208ENST00000469585 UBE4AQ14139 1066 aa7.56□□□□□ -1.2
PTCD3-208ENST00000469585 PUM3Q15397 648 aaKnown RBP7.56□□□□□ -1.2
PTCD3-208ENST00000469585 MPZL3Q6UWV2 235 aa7.56□□□□□ -1.2
PTCD3-208ENST00000469585 OLFM4Q6UX06 510 aa7.56□□□□□ -1.2
PTCD3-208ENST00000469585 KIF18BQ86Y91 864 aa7.56□□□□□ -1.2
PTCD3-208ENST00000469585 ERC1Q8IUD2 1116 aa7.56□□□□□ -1.2
PTCD3-208ENST00000469585 TMEM57Q8N5G2 664 aa7.56□□□□□ -1.2
PTCD3-208ENST00000469585 CHST14Q8NCH0 376 aa7.56□□□□□ -1.2
PTCD3-208ENST00000469585 DBNDD1Q9H9R9 158 aa7.56□□□□□ -1.2
PTCD3-208ENST00000469585 DSEQ9UL01 958 aa7.56□□□□□ -1.2
PTCD3-208ENST00000469585 MED23Q9ULK4 1368 aa7.56□□□□□ -1.2
PTCD3-208ENST00000469585 TCRBV5S2A0A599 114 aa7.55□□□□□ -1.2
PTCD3-208ENST00000469585 MAN2B1O00754 1011 aa7.55□□□□□ -1.2
PTCD3-208ENST00000469585 MAFKO60675 156 aa7.55□□□□□ -1.2
PTCD3-208ENST00000469585 RAD17O75943 681 aa7.55□□□□□ -1.2
PTCD3-208ENST00000469585 CIAO1O76071 339 aa7.55□□□□□ -1.2
PTCD3-208ENST00000469585 POU3F3P20264 500 aaPredicted RBP7.55□□□□□ -1.2
PTCD3-208ENST00000469585 SOX5P35711 763 aa7.55□□□□□ -1.2
PTCD3-208ENST00000469585 FSTL1Q12841 308 aa7.55□□□□□ -1.2
PTCD3-208ENST00000469585 MVPQ14764 893 aaKnown RBP7.55□□□□□ -1.2
PTCD3-208ENST00000469585 SLC9A5Q14940 896 aa7.55□□□□□ -1.2
PTCD3-208ENST00000469585 RABL6Q3YEC7 729 aaPredicted RBP7.55□□□□□ -1.2
PTCD3-208ENST00000469585 ZC3H14Q6PJT7 736 aaKnown RBP7.55□□□□□ -1.2
PTCD3-208ENST00000469585 HHIPL2Q6UWX4 724 aa7.55□□□□□ -1.2
PTCD3-208ENST00000469585 PRR23BQ6ZRT6 265 aa7.55□□□□□ -1.2
PTCD3-208ENST00000469585 OTOP1Q7RTM1 612 aa7.55□□□□□ -1.2
PTCD3-208ENST00000469585 MILR1Q7Z6M3 343 aa7.55□□□□□ -1.2
PTCD3-208ENST00000469585 UBR7Q8N806 425 aa7.55□□□□□ -1.2
PTCD3-208ENST00000469585 PHOSPHO1Q8TCT1 267 aa7.55□□□□□ -1.2
PTCD3-208ENST00000469585 GPATCH3Q96I76 525 aa7.55□□□□□ -1.2
PTCD3-208ENST00000469585 MEIS3Q99687 375 aa7.55□□□□□ -1.2
PTCD3-208ENST00000469585 SIL1Q9H173 461 aa7.55□□□□□ -1.2
PTCD3-208ENST00000469585 MYOTQ9UBF9 498 aa7.55□□□□□ -1.2
PTCD3-208ENST00000469585 ASH2LQ9UBL3 628 aa7.55□□□□□ -1.2
PTCD3-208ENST00000469585 B4GALT6Q9UBX8 382 aa7.55□□□□□ -1.2
PTCD3-208ENST00000469585 DBR1Q9UK59 544 aaKnown RBP7.55□□□□□ -1.2
PTCD3-208ENST00000469585 SRPK3Q9UPE1 567 aa7.55□□□□□ -1.2
PTCD3-208ENST00000469585 TELO2Q9Y4R8 837 aa7.55□□□□□ -1.2
PTCD3-208ENST00000469585 PCDHB4Q9Y5E5 795 aa7.55□□□□□ -1.2
PTCD3-208ENST00000469585 DICER1Q9UPY3 1922 aaKnown RBP7.54□□□□□ -1.2
PTCD3-208ENST00000469585 CCDC88AQ3V6T2 1871 aa7.54□□□□□ -1.2
PTCD3-208ENST00000469585 EYA2O00167 538 aa7.54□□□□□ -1.2
PTCD3-208ENST00000469585 SLC27A2O14975 620 aa7.54□□□□□ -1.2
PTCD3-208ENST00000469585 DDNO94850 711 aaPredicted RBP7.54□□□□□ -1.2
PTCD3-208ENST00000469585 KRT15P19012 456 aa7.54□□□□□ -1.2
PTCD3-208ENST00000469585 HIBADHP31937 336 aaKnown RBP7.54□□□□□ -1.2
PTCD3-208ENST00000469585 VIPR1P32241 457 aa7.54□□□□□ -1.2
PTCD3-208ENST00000469585 EPHX2P34913 555 aa7.54□□□□□ -1.2
PTCD3-208ENST00000469585 EPHA5P54756 1037 aa7.54□□□□□ -1.2
PTCD3-208ENST00000469585 TTLL5Q6EMB2 1281 aa7.54□□□□□ -1.2
PTCD3-208ENST00000469585 USP50Q70EL3 339 aaPredicted RBP7.54□□□□□ -1.2
PTCD3-208ENST00000469585 ZNF605Q86T29 641 aa7.54□□□□□ -1.2
PTCD3-208ENST00000469585 LDHDQ86WU2 507 aa7.54□□□□□ -1.2
PTCD3-208ENST00000469585 PTRH1Q86Y79 214 aaKnown RBP7.54□□□□□ -1.2
PTCD3-208ENST00000469585 ZGPATQ8N5A5 531 aaKnown RBP7.54□□□□□ -1.2
PTCD3-208ENST00000469585 C2orf69Q8N8R5 385 aa7.54□□□□□ -1.2
PTCD3-208ENST00000469585 AGBL3Q8NEM8 1001 aa7.54□□□□□ -1.2
PTCD3-208ENST00000469585 TBC1D22AQ8WUA7 517 aa7.54□□□□□ -1.2
PTCD3-208ENST00000469585 LEO1Q8WVC0 666 aaPredicted RBP7.54□□□□□ -1.2
PTCD3-208ENST00000469585 LPIN2Q92539 896 aa7.54□□□□□ -1.2
PTCD3-208ENST00000469585 FAM126AQ9BYI3 521 aaPredicted RBP7.54□□□□□ -1.2
PTCD3-208ENST00000469585 CD244Q9BZW8 370 aa7.54□□□□□ -1.2
PTCD3-208ENST00000469585 ADARB2Q9NS39 739 aaKnown RBP7.54□□□□□ -1.2
PTCD3-208ENST00000469585 FAM53CQ9NYF3 392 aa7.54□□□□□ -1.2
PTCD3-208ENST00000469585 POLLQ9UGP5 575 aa7.54□□□□□ -1.2
PTCD3-208ENST00000469585 PLA2G2DQ9UNK4 145 aa7.54□□□□□ -1.2
PTCD3-208ENST00000469585 MAST3O60307 1309 aa7.53□□□□□ -1.2
PTCD3-208ENST00000469585 SBF1O95248 1867 aa7.53□□□□□ -1.2
PTCD3-208ENST00000469585 SPEF2Q9C093 1822 aa7.53□□□□□ -1.2
PTCD3-208ENST00000469585 TAF5LO75529 589 aa7.53□□□□□ -1.2
PTCD3-208ENST00000469585 SURF6O75683 361 aaKnown RBP7.53□□□□□ -1.2
PTCD3-208ENST00000469585 PDE8BO95263 885 aa7.53□□□□□ -1.2
PTCD3-208ENST00000469585 F2P00734 622 aa7.53□□□□□ -1.2
PTCD3-208ENST00000469585 ZBTB48P10074 688 aaPredicted RBP7.53□□□□□ -1.2
PTCD3-208ENST00000469585 NF2P35240 595 aa7.53□□□□□ -1.2
PTCD3-208ENST00000469585 RBM5P52756 815 aaKnown RBP eCLIP7.53□□□□□ -1.2
PTCD3-208ENST00000469585 AMPD3Q01432 767 aa7.53□□□□□ -1.2
PTCD3-208ENST00000469585 DSG1Q02413 1049 aa7.53□□□□□ -1.2
PTCD3-208ENST00000469585 ATP2B3Q16720 1220 aa7.53□□□□□ -1.2
PTCD3-208ENST00000469585 SKOR2Q2VWA4 1001 aaPredicted RBP7.53□□□□□ -1.2
PTCD3-208ENST00000469585 FIGNQ5HY92 759 aa7.53□□□□□ -1.2
PTCD3-208ENST00000469585 CCDC158Q5M9N0 1113 aa7.53□□□□□ -1.2
PTCD3-208ENST00000469585 STRIP1Q5VSL9 837 aa7.53□□□□□ -1.2
PTCD3-208ENST00000469585 FSTL4Q6MZW2 842 aa7.53□□□□□ -1.2
PTCD3-208ENST00000469585 KCTD1Q719H9 257 aa7.53□□□□□ -1.2
PTCD3-208ENST00000469585 STRA8Q7Z7C7 330 aa7.53□□□□□ -1.2
PTCD3-208ENST00000469585 NOSTRINQ8IVI9 506 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms