RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 HUNKP57058 714 aa10.64□□□□□ -0.71
NUP50-214ENST00000469163 TBL3Q12788 808 aaKnown RBP10.64□□□□□ -0.71
NUP50-214ENST00000469163 VGLL4Q14135 290 aa10.64□□□□□ -0.71
NUP50-214ENST00000469163 IFI16Q16666 785 aaKnown RBP10.64□□□□□ -0.71
NUP50-214ENST00000469163 DCLK2Q8N568 766 aa10.64□□□□□ -0.71
NUP50-214ENST00000469163 PDCD7Q8N8D1 485 aaKnown RBP10.64□□□□□ -0.71
NUP50-214ENST00000469163 PPFIBP2Q8ND30 876 aa10.64□□□□□ -0.71
NUP50-214ENST00000469163 P3H4Q92791 437 aa10.64□□□□□ -0.71
NUP50-214ENST00000469163 SHISA4Q96DD7 197 aa10.64□□□□□ -0.71
NUP50-214ENST00000469163 ZIM3Q96PE6 472 aa10.64□□□□□ -0.71
NUP50-214ENST00000469163 MMS19Q96T76 1030 aa10.64□□□□□ -0.71
NUP50-214ENST00000469163 ANO3Q9BYT9 981 aa10.64□□□□□ -0.71
NUP50-214ENST00000469163 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.64□□□□□ -0.71
NUP50-214ENST00000469163 CTNND2Q9UQB3 1225 aa10.64□□□□□ -0.71
NUP50-214ENST00000469163 CFAP73A6NFT4 308 aa10.64□□□□□ -0.71
NUP50-214ENST00000469163 MAGEB3O15480 346 aa10.64□□□□□ -0.71
NUP50-214ENST00000469163 SART1O43290 800 aaKnown RBP10.64□□□□□ -0.71
NUP50-214ENST00000469163 ENTPD3O75355 529 aa10.64□□□□□ -0.71
NUP50-214ENST00000469163 DNA2P51530 1060 aa10.64□□□□□ -0.71
NUP50-214ENST00000469163 ARID5AQ03989 594 aa10.64□□□□□ -0.71
NUP50-214ENST00000469163 BAATQ14032 418 aaPredicted RBP10.64□□□□□ -0.71
NUP50-214ENST00000469163 TMEM214Q6NUQ4 689 aaKnown RBP10.64□□□□□ -0.71
NUP50-214ENST00000469163 ANKK1Q8NFD2 765 aa10.64□□□□□ -0.71
NUP50-214ENST00000469163 UCMAQ8WVF2 138 aa10.64□□□□□ -0.71
NUP50-214ENST00000469163 USP6NLQ92738 828 aa10.64□□□□□ -0.71
NUP50-214ENST00000469163 VPS16Q9H269 839 aa10.64□□□□□ -0.71
NUP50-214ENST00000469163 CIDEBQ9UHD4 219 aa10.64□□□□□ -0.71
NUP50-214ENST00000469163 RCOR1Q9UKL0 485 aa10.64□□□□□ -0.71
NUP50-214ENST00000469163 SUGT1Q9Y2Z0 365 aa10.64□□□□□ -0.71
NUP50-214ENST00000469163 IVNS1ABPQ9Y6Y0 642 aa10.64□□□□□ -0.71
NUP50-214ENST00000469163 LY75O60449 1722 aa10.64□□□□□ -0.71
NUP50-214ENST00000469163 MAGEA13PA6NCF6 341 aa10.64□□□□□ -0.71
NUP50-214ENST00000469163 PPP1R11O60927 126 aaPredicted RBP10.64□□□□□ -0.71
NUP50-214ENST00000469163 TACC1O75410 805 aa10.64□□□□□ -0.71
NUP50-214ENST00000469163 GBP1P32455 592 aa10.64□□□□□ -0.71
NUP50-214ENST00000469163 ADARP55265 1226 aaKnown RBP10.64□□□□□ -0.71
NUP50-214ENST00000469163 SH3BGRP55822 239 aaPredicted RBP10.64□□□□□ -0.71
NUP50-214ENST00000469163 MKRN4PQ13434 485 aaPredicted RBP10.64□□□□□ -0.71
NUP50-214ENST00000469163 FOXB2Q5VYV0 432 aa10.64□□□□□ -0.71
NUP50-214ENST00000469163 TSEN2Q8NCE0 465 aaKnown RBP10.64□□□□□ -0.71
NUP50-214ENST00000469163 RMDN3Q96TC7 470 aa10.64□□□□□ -0.71
NUP50-214ENST00000469163 PHF20Q9BVI0 1012 aa10.64□□□□□ -0.71
NUP50-214ENST00000469163 MAK16Q9BXY0 300 aaKnown RBP10.64□□□□□ -0.71
NUP50-214ENST00000469163 AGXT2Q9BYV1 514 aa10.64□□□□□ -0.71
NUP50-214ENST00000469163 FOXP1Q9H334 677 aaPredicted RBP10.64□□□□□ -0.71
NUP50-214ENST00000469163 HERC5Q9UII4 1024 aaKnown RBP10.64□□□□□ -0.71
NUP50-214ENST00000469163 A0A0J9YVX5 310 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 IQCA1LA6NCM1 817 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 CCT8L1PA6NM43 557 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 E9PMD0 336 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 GAS7O60861 476 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 OR52Z1P0C646 297 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 TMOD1P28289 359 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 ZNF268Q14587 947 aaPredicted RBP10.63□□□□□ -0.71
NUP50-214ENST00000469163 POTEGQ6S5H5 508 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 FAM47EQ6ZV65 393 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 GPC2Q8N158 579 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 RNF10Q8N5U6 811 aaKnown RBP10.63□□□□□ -0.71
NUP50-214ENST00000469163 ARFGAP2Q8N6H7 521 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 ANKRD13CQ8N6S4 541 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 ZNF280CQ8ND82 737 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 SLC17A8Q8NDX2 589 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 GABPB2Q8TAK5 448 aaPredicted RBP10.63□□□□□ -0.71
NUP50-214ENST00000469163 MORC4Q8TE76 937 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 PPP2R3CQ969Q6 453 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 VTI1AQ96AJ9 217 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 KLHL29Q96CT2 875 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 GPBP1L1Q9HC44 474 aaPredicted RBP10.63□□□□□ -0.71
NUP50-214ENST00000469163 RNF146Q9NTX7 359 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 GDAQ9Y2T3 454 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 TAF1LQ8IZX4 1826 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 POTEB3A0JP26 581 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 POTECB2RU33 542 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 TBCAO75347 108 aaKnown RBP10.63□□□□□ -0.71
NUP50-214ENST00000469163 SPATA31D3P0C874 917 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 NQO1P15559 274 aaKnown RBP10.63□□□□□ -0.71
NUP50-214ENST00000469163 SERPINB3P29508 390 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 IREB2P48200 963 aaKnown RBP10.63□□□□□ -0.71
NUP50-214ENST00000469163 CACNA2D1P54289 1103 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 PDE4DQ08499 809 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 POTEBQ6S5H4 581 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 SPATA31D4Q6ZUB0 917 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 KRT25Q7Z3Z0 450 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 CYP4X1Q8N118 509 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 TRIM47Q96LD4 638 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 GGT7Q9UJ14 662 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 RREB1Q92766 1687 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 IGF2BP3O00425 579 aaKnown RBP eCLIP10.63□□□□□ -0.71
NUP50-214ENST00000469163 GSTA2P09210 222 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 GHRP10912 638 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 PCP11498 1178 aaKnown RBP10.63□□□□□ -0.71
NUP50-214ENST00000469163 PLCG1P19174 1290 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 ATP6V1C1P21283 382 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 TCF7P36402 384 aaPredicted RBP10.63□□□□□ -0.71
NUP50-214ENST00000469163 DHX9Q08211 1270 aaKnown RBP10.63□□□□□ -0.71
NUP50-214ENST00000469163 RCN2Q14257 317 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 C1orf228Q6PIY5 440 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 CCDC197Q8NCU1 140 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 LENG1Q96BZ8 264 aaPredicted RBP10.63□□□□□ -0.71
NUP50-214ENST00000469163 IDI2Q9BXS1 227 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms