RNA–Protein interactions for RNA: ENST00000468892.5

ABCF3-207, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 1,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-207ENST00000468892 TOM1L1O75674 476 aa20.35■□□□□ 0.85
ABCF3-207ENST00000468892 IPO7O95373 1038 aaKnown RBP20.35■□□□□ 0.85
ABCF3-207ENST00000468892 CCDC175P0C221 793 aa20.35■□□□□ 0.85
ABCF3-207ENST00000468892 RARBP10826 455 aa20.35■□□□□ 0.85
ABCF3-207ENST00000468892 PON1P27169 355 aa20.35■□□□□ 0.85
ABCF3-207ENST00000468892 CYLC1P35663 651 aaPredicted RBP20.35■□□□□ 0.85
ABCF3-207ENST00000468892 GJA9P57773 515 aa20.35■□□□□ 0.85
ABCF3-207ENST00000468892 TMEM132AQ24JP5 1023 aa20.35■□□□□ 0.85
ABCF3-207ENST00000468892 DNTTIP2Q5QJE6 756 aaKnown RBP20.35■□□□□ 0.85
ABCF3-207ENST00000468892 RRAGAQ7L523 313 aa20.35■□□□□ 0.85
ABCF3-207ENST00000468892 ZNF410Q86VK4 478 aa20.35■□□□□ 0.85
ABCF3-207ENST00000468892 CCDC170Q8IYT3 715 aa20.35■□□□□ 0.85
ABCF3-207ENST00000468892 CCDC155Q8N6L0 562 aa20.35■□□□□ 0.85
ABCF3-207ENST00000468892 TRIB2Q92519 343 aa20.35■□□□□ 0.85
ABCF3-207ENST00000468892 SAAL1Q96ER3 474 aa20.35■□□□□ 0.85
ABCF3-207ENST00000468892 ERO1AQ96HE7 468 aa20.35■□□□□ 0.85
ABCF3-207ENST00000468892 TCHPQ9BT92 498 aa20.35■□□□□ 0.85
ABCF3-207ENST00000468892 MSTO1Q9BUK6 570 aa20.35■□□□□ 0.85
ABCF3-207ENST00000468892 SRRDQ9UH36 339 aa20.35■□□□□ 0.85
ABCF3-207ENST00000468892 PLAGL2Q9UPG8 496 aa20.35■□□□□ 0.85
ABCF3-207ENST00000468892 CASP8AP2Q9UKL3 1982 aa20.35■□□□□ 0.85
ABCF3-207ENST00000468892 SIP14410 1827 aa20.35■□□□□ 0.85
ABCF3-207ENST00000468892 A0A0B4J269 797 aa20.34■□□□□ 0.85
ABCF3-207ENST00000468892 GOLGA8IPA6NC78 632 aa20.34■□□□□ 0.85
ABCF3-207ENST00000468892 GOLGA8JA6NMD2 632 aa20.34■□□□□ 0.85
ABCF3-207ENST00000468892 INO80B-WBP1J3KQ70 363 aa20.34■□□□□ 0.85
ABCF3-207ENST00000468892 RNF225M0QZC1 329 aaPredicted RBP20.34■□□□□ 0.85
ABCF3-207ENST00000468892 MSCO60682 206 aa20.34■□□□□ 0.85
ABCF3-207ENST00000468892 SMIM10L2AP0DMW4 78 aa20.34■□□□□ 0.85
ABCF3-207ENST00000468892 SMIM10L2BP0DMW5 78 aa20.34■□□□□ 0.85
ABCF3-207ENST00000468892 POLR2FP61218 127 aaKnown RBP20.34■□□□□ 0.85
ABCF3-207ENST00000468892 CYP24A1Q07973 514 aa20.34■□□□□ 0.85
ABCF3-207ENST00000468892 FAM187BQ17R55 369 aa20.34■□□□□ 0.85
ABCF3-207ENST00000468892 KLHDC7AQ5VTJ3 777 aa20.34■□□□□ 0.85
ABCF3-207ENST00000468892 SFMBT2Q5VUG0 894 aa20.34■□□□□ 0.85
ABCF3-207ENST00000468892 E4F1Q66K89 784 aaPredicted RBP20.34■□□□□ 0.85
ABCF3-207ENST00000468892 PDXDC1Q6P996 788 aa20.34■□□□□ 0.85
ABCF3-207ENST00000468892 CBWD2Q8IUF1 395 aa20.34■□□□□ 0.85
ABCF3-207ENST00000468892 PRIMPOLQ96LW4 560 aa20.34■□□□□ 0.85
ABCF3-207ENST00000468892 SCLT1Q96NL6 688 aa20.34■□□□□ 0.85
ABCF3-207ENST00000468892 FAM213AQ9BRX8 229 aa20.34■□□□□ 0.85
ABCF3-207ENST00000468892 INO80BQ9C086 356 aaPredicted RBP20.34■□□□□ 0.85
ABCF3-207ENST00000468892 UPF3AQ9H1J1 476 aaKnown RBP20.34■□□□□ 0.85
ABCF3-207ENST00000468892 FZD8Q9H461 694 aa20.34■□□□□ 0.85
ABCF3-207ENST00000468892 HAS3O00219 553 aa20.34■□□□□ 0.85
ABCF3-207ENST00000468892 C6orf222P0C671 652 aaPredicted RBP20.34■□□□□ 0.85
ABCF3-207ENST00000468892 TRIM49P0CI25 452 aa20.34■□□□□ 0.85
ABCF3-207ENST00000468892 TRIM49CP0CI26 452 aa20.34■□□□□ 0.85
ABCF3-207ENST00000468892 VEGFBP49765 207 aa20.34■□□□□ 0.85
ABCF3-207ENST00000468892 PRMT2P55345 433 aa20.34■□□□□ 0.85
ABCF3-207ENST00000468892 PRPF4BQ13523 1007 aaKnown RBP20.34■□□□□ 0.85
ABCF3-207ENST00000468892 NFRKBQ6P4R8 1299 aa20.34■□□□□ 0.85
ABCF3-207ENST00000468892 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.34■□□□□ 0.85
ABCF3-207ENST00000468892 PARD3BQ8TEW8 1205 aa20.34■□□□□ 0.85
ABCF3-207ENST00000468892 SPAG5Q96R06 1193 aa20.34■□□□□ 0.85
ABCF3-207ENST00000468892 FNBP1Q96RU3 617 aa20.34■□□□□ 0.85
ABCF3-207ENST00000468892 ACO2Q99798 780 aaKnown RBP20.34■□□□□ 0.85
ABCF3-207ENST00000468892 MTG1Q9BT17 334 aaPredicted RBP20.34■□□□□ 0.85
ABCF3-207ENST00000468892 ANKFY1Q9P2R3 1169 aa20.34■□□□□ 0.85
ABCF3-207ENST00000468892 SMIM35A0A1B0GVV1 85 aa20.33■□□□□ 0.84
ABCF3-207ENST00000468892 SOWAHDA6NJG2 315 aa20.33■□□□□ 0.84
ABCF3-207ENST00000468892 NOL4O94818 638 aa20.33■□□□□ 0.84
ABCF3-207ENST00000468892 ADRB2P07550 413 aa20.33■□□□□ 0.84
ABCF3-207ENST00000468892 UCHL3P15374 230 aa20.33■□□□□ 0.84
ABCF3-207ENST00000468892 MXI1P50539 228 aa20.33■□□□□ 0.84
ABCF3-207ENST00000468892 NKX3-2P78367 333 aa20.33■□□□□ 0.84
ABCF3-207ENST00000468892 NCBP1Q09161 790 aaKnown RBP20.33■□□□□ 0.84
ABCF3-207ENST00000468892 PSMD6Q15008 389 aa20.33■□□□□ 0.84
ABCF3-207ENST00000468892 PCBP1Q15365 356 aaKnown RBP eCLIP20.33■□□□□ 0.84
ABCF3-207ENST00000468892 SURF1Q15526 300 aa20.33■□□□□ 0.84
ABCF3-207ENST00000468892 KYAT1Q16773 422 aa20.33■□□□□ 0.84
ABCF3-207ENST00000468892 GNASQ5JWF2 1037 aa20.33■□□□□ 0.84
ABCF3-207ENST00000468892 KRT39Q6A163 491 aa20.33■□□□□ 0.84
ABCF3-207ENST00000468892 TSHZ1Q6ZSZ6 1077 aa20.33■□□□□ 0.84
ABCF3-207ENST00000468892 APBB1IPQ7Z5R6 666 aaPredicted RBP20.33■□□□□ 0.84
ABCF3-207ENST00000468892 SRGAP1Q7Z6B7 1085 aa20.33■□□□□ 0.84
ABCF3-207ENST00000468892 C17orf53Q8N3J3 647 aaPredicted RBP20.33■□□□□ 0.84
ABCF3-207ENST00000468892 EHBP1Q8NDI1 1231 aa20.33■□□□□ 0.84
ABCF3-207ENST00000468892 TRPV1Q8NER1 839 aa20.33■□□□□ 0.84
ABCF3-207ENST00000468892 BAP1Q92560 729 aa20.33■□□□□ 0.84
ABCF3-207ENST00000468892 KAT2BQ92831 832 aa20.33■□□□□ 0.84
ABCF3-207ENST00000468892 GANQ9H2C0 597 aa20.33■□□□□ 0.84
ABCF3-207ENST00000468892 TMEM8AQ9HCN3 771 aa20.33■□□□□ 0.84
ABCF3-207ENST00000468892 SETD4Q9NVD3 440 aa20.33■□□□□ 0.84
ABCF3-207ENST00000468892 SAGE1Q9NXZ1 904 aa20.33■□□□□ 0.84
ABCF3-207ENST00000468892 PPP2R2CQ9Y2T4 447 aa20.33■□□□□ 0.84
ABCF3-207ENST00000468892 BZW2Q9Y6E2 419 aaKnown RBP20.33■□□□□ 0.84
ABCF3-207ENST00000468892 KAT6AQ92794 2004 aa20.32■□□□□ 0.84
ABCF3-207ENST00000468892 LRRC53A6NM62 1247 aa20.32■□□□□ 0.84
ABCF3-207ENST00000468892 GPR25O00155 361 aa20.32■□□□□ 0.84
ABCF3-207ENST00000468892 HMGCRP04035 888 aa20.32■□□□□ 0.84
ABCF3-207ENST00000468892 CCDC172P0C7W6 258 aa20.32■□□□□ 0.84
ABCF3-207ENST00000468892 SLC9A1P19634 815 aa20.32■□□□□ 0.84
ABCF3-207ENST00000468892 CHMP4BP1P59074 171 aa20.32■□□□□ 0.84
ABCF3-207ENST00000468892 KRT83P78385 493 aa20.32■□□□□ 0.84
ABCF3-207ENST00000468892 PTPN14Q15678 1187 aa20.32■□□□□ 0.84
ABCF3-207ENST00000468892 SLC9C1Q4G0N8 1177 aa20.32■□□□□ 0.84
ABCF3-207ENST00000468892 MARCH8Q5T0T0 291 aa20.32■□□□□ 0.84
ABCF3-207ENST00000468892 ATF7IP2Q5U623 682 aa20.32■□□□□ 0.84
ABCF3-207ENST00000468892 TRIM65Q6PJ69 517 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms