RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 SLC16A4O15374 487 aa16.28■□□□□ 0.2
TMEM39A-205ENST00000468676 ITGA4P13612 1032 aa16.28■□□□□ 0.2
TMEM39A-205ENST00000468676 LAG3P18627 525 aa16.28■□□□□ 0.2
TMEM39A-205ENST00000468676 LIG1P18858 919 aa16.28■□□□□ 0.2
TMEM39A-205ENST00000468676 ANP32AP39687 249 aaKnown RBP16.28■□□□□ 0.2
TMEM39A-205ENST00000468676 ZNF131P52739 623 aa16.28■□□□□ 0.2
TMEM39A-205ENST00000468676 STRN3Q13033 797 aa16.28■□□□□ 0.2
TMEM39A-205ENST00000468676 GPM6BQ13491 265 aa16.28■□□□□ 0.2
TMEM39A-205ENST00000468676 ADGRE1Q14246 886 aa16.28■□□□□ 0.2
TMEM39A-205ENST00000468676 PTPROQ16827 1216 aa16.28■□□□□ 0.2
TMEM39A-205ENST00000468676 NOMO2Q5JPE7 1267 aa16.28■□□□□ 0.2
TMEM39A-205ENST00000468676 SHC4Q6S5L8 630 aa16.28■□□□□ 0.2
TMEM39A-205ENST00000468676 SPRED2Q7Z698 418 aa16.28■□□□□ 0.2
TMEM39A-205ENST00000468676 MYCT1Q8N699 235 aa16.28■□□□□ 0.2
TMEM39A-205ENST00000468676 SLC17A8Q8NDX2 589 aa16.28■□□□□ 0.2
TMEM39A-205ENST00000468676 URGCPQ8TCY9 931 aa16.28■□□□□ 0.2
TMEM39A-205ENST00000468676 HELQQ8TDG4 1101 aa16.28■□□□□ 0.2
TMEM39A-205ENST00000468676 LEO1Q8WVC0 666 aaPredicted RBP16.28■□□□□ 0.2
TMEM39A-205ENST00000468676 MRPL4Q9BYD3 311 aaKnown RBP16.28■□□□□ 0.2
TMEM39A-205ENST00000468676 TYW1Q9NV66 732 aaKnown RBP16.28■□□□□ 0.2
TMEM39A-205ENST00000468676 IPPQ9Y573 584 aa16.28■□□□□ 0.2
TMEM39A-205ENST00000468676 ZMYM2Q9UBW7 1377 aa16.27■□□□□ 0.2
TMEM39A-205ENST00000468676 A0A087X0B3 334 aa16.27■□□□□ 0.2
TMEM39A-205ENST00000468676 RFXAPO00287 272 aa16.27■□□□□ 0.2
TMEM39A-205ENST00000468676 OFD1O75665 1012 aa16.27■□□□□ 0.2
TMEM39A-205ENST00000468676 NCKAP1LP55160 1127 aa16.27■□□□□ 0.2
TMEM39A-205ENST00000468676 AMPD3Q01432 767 aa16.27■□□□□ 0.2
TMEM39A-205ENST00000468676 DCAF4L1Q3SXM0 396 aa16.27■□□□□ 0.2
TMEM39A-205ENST00000468676 RESP18Q5W5W9 173 aa16.27■□□□□ 0.2
TMEM39A-205ENST00000468676 ADALQ6DHV7 355 aa16.27■□□□□ 0.2
TMEM39A-205ENST00000468676 AGMOQ6ZNB7 445 aa16.27■□□□□ 0.2
TMEM39A-205ENST00000468676 PDILTQ8N807 584 aa16.27■□□□□ 0.2
TMEM39A-205ENST00000468676 SMG8Q8ND04 991 aaKnown RBP16.27■□□□□ 0.2
TMEM39A-205ENST00000468676 TMEM161BQ8NDZ6 487 aa16.27■□□□□ 0.2
TMEM39A-205ENST00000468676 MAFAQ8NHW3 353 aaPredicted RBP16.27■□□□□ 0.2
TMEM39A-205ENST00000468676 GDPD5Q8WTR4 605 aa16.27■□□□□ 0.2
TMEM39A-205ENST00000468676 DDX12PQ92771 950 aa16.27■□□□□ 0.2
TMEM39A-205ENST00000468676 LPPQ93052 612 aa16.27■□□□□ 0.2
TMEM39A-205ENST00000468676 EIF2AQ9BY44 585 aaKnown RBP16.27■□□□□ 0.2
TMEM39A-205ENST00000468676 LMAN2LQ9H0V9 348 aa16.27■□□□□ 0.2
TMEM39A-205ENST00000468676 TNMDQ9H2S6 317 aa16.27■□□□□ 0.2
TMEM39A-205ENST00000468676 PDZD7Q9H5P4 517 aa16.27■□□□□ 0.2
TMEM39A-205ENST00000468676 CWH43Q9H720 699 aa16.27■□□□□ 0.2
TMEM39A-205ENST00000468676 RSAD1Q9HA92 442 aa16.27■□□□□ 0.2
TMEM39A-205ENST00000468676 MAGEF1Q9HAY2 307 aa16.27■□□□□ 0.2
TMEM39A-205ENST00000468676 SEL1LQ9UBV2 794 aa16.27■□□□□ 0.2
TMEM39A-205ENST00000468676 TNFSF13BQ9Y275 285 aa16.27■□□□□ 0.2
TMEM39A-205ENST00000468676 GIT1Q9Y2X7 761 aa16.27■□□□□ 0.2
TMEM39A-205ENST00000468676 PRRC2BQ5JSZ5 2229 aaKnown RBP16.27■□□□□ 0.19
TMEM39A-205ENST00000468676 TRAK2O60296 914 aa16.26■□□□□ 0.19
TMEM39A-205ENST00000468676 LPXNO60711 386 aa16.26■□□□□ 0.19
TMEM39A-205ENST00000468676 NPTXRO95502 500 aa16.26■□□□□ 0.19
TMEM39A-205ENST00000468676 MAPTP10636 758 aaKnown RBP16.26■□□□□ 0.19
TMEM39A-205ENST00000468676 GAP43P17677 238 aa16.26■□□□□ 0.19
TMEM39A-205ENST00000468676 CMA1P23946 247 aa16.26■□□□□ 0.19
TMEM39A-205ENST00000468676 NT5DC1Q5TFE4 455 aa16.26■□□□□ 0.19
TMEM39A-205ENST00000468676 ATF7IP2Q5U623 682 aa16.26■□□□□ 0.19
TMEM39A-205ENST00000468676 MRPL38Q96DV4 380 aaKnown RBP16.26■□□□□ 0.19
TMEM39A-205ENST00000468676 ZHX3Q9H4I2 956 aa16.26■□□□□ 0.19
TMEM39A-205ENST00000468676 CIZ1Q9ULV3 898 aaPredicted RBP16.26■□□□□ 0.19
TMEM39A-205ENST00000468676 MTCH2Q9Y6C9 303 aa16.26■□□□□ 0.19
TMEM39A-205ENST00000468676 KIAA1671Q9BY89 1806 aa16.25■□□□□ 0.19
TMEM39A-205ENST00000468676 MYMKA6NI61 221 aa16.25■□□□□ 0.19
TMEM39A-205ENST00000468676 INPPL1O15357 1258 aa16.25■□□□□ 0.19
TMEM39A-205ENST00000468676 PPM1AP35813 382 aa16.25■□□□□ 0.19
TMEM39A-205ENST00000468676 ALDH7A1P49419 539 aaKnown RBP16.25■□□□□ 0.19
TMEM39A-205ENST00000468676 UBE3AQ05086 875 aa16.25■□□□□ 0.19
TMEM39A-205ENST00000468676 RNASELQ05823 741 aaKnown RBP16.25■□□□□ 0.19
TMEM39A-205ENST00000468676 E2F4Q16254 413 aa16.25■□□□□ 0.19
TMEM39A-205ENST00000468676 LONRF3Q496Y0 759 aa16.25■□□□□ 0.19
TMEM39A-205ENST00000468676 ZPBP2Q6X784 338 aa16.25■□□□□ 0.19
TMEM39A-205ENST00000468676 LRRC55Q6ZSA7 311 aa16.25■□□□□ 0.19
TMEM39A-205ENST00000468676 DYMQ7RTS9 669 aa16.25■□□□□ 0.19
TMEM39A-205ENST00000468676 TAS1R3Q7RTX0 852 aa16.25■□□□□ 0.19
TMEM39A-205ENST00000468676 HAUS6Q7Z4H7 955 aa16.25■□□□□ 0.19
TMEM39A-205ENST00000468676 FAM178BQ8IXR5 827 aa16.25■□□□□ 0.19
TMEM39A-205ENST00000468676 COLGALT1Q8NBJ5 622 aa16.25■□□□□ 0.19
TMEM39A-205ENST00000468676 DHX58Q96C10 678 aa16.25■□□□□ 0.19
TMEM39A-205ENST00000468676 ZNF558Q96NG5 402 aa16.25■□□□□ 0.19
TMEM39A-205ENST00000468676 ACO2Q99798 780 aaKnown RBP16.25■□□□□ 0.19
TMEM39A-205ENST00000468676 KBTBD4Q9NVX7 518 aa16.25■□□□□ 0.19
TMEM39A-205ENST00000468676 KCNH3Q9ULD8 1083 aa16.25■□□□□ 0.19
TMEM39A-205ENST00000468676 PLAGL2Q9UPG8 496 aa16.25■□□□□ 0.19
TMEM39A-205ENST00000468676 INPP5FQ9Y2H2 1132 aa16.25■□□□□ 0.19
TMEM39A-205ENST00000468676 COL4A4P53420 1690 aaPredicted RBP16.24■□□□□ 0.19
TMEM39A-205ENST00000468676 TTLL13PA6NNM8 815 aa16.24■□□□□ 0.19
TMEM39A-205ENST00000468676 MEIS3P2A8K0S8 358 aa16.24■□□□□ 0.19
TMEM39A-205ENST00000468676 POLR2DO15514 142 aaKnown RBP16.24■□□□□ 0.19
TMEM39A-205ENST00000468676 KCNT2Q6UVM3 1135 aa16.24■□□□□ 0.19
TMEM39A-205ENST00000468676 CDR2LQ86X02 465 aaPredicted RBP16.24■□□□□ 0.19
TMEM39A-205ENST00000468676 KLHL23Q8NBE8 558 aa16.24■□□□□ 0.19
TMEM39A-205ENST00000468676 DNAJC19Q96DA6 116 aa16.24■□□□□ 0.19
TMEM39A-205ENST00000468676 NXF3Q9H4D5 531 aaKnown RBP16.24■□□□□ 0.19
TMEM39A-205ENST00000468676 ST6GALNAC4Q9H4F1 302 aa16.24■□□□□ 0.19
TMEM39A-205ENST00000468676 TBC1D13Q9NVG8 400 aa16.24■□□□□ 0.19
TMEM39A-205ENST00000468676 USP25Q9UHP3 1055 aa16.24■□□□□ 0.19
TMEM39A-205ENST00000468676 HES2Q9Y543 173 aa16.24■□□□□ 0.19
TMEM39A-205ENST00000468676 ARL5CA6NH57 179 aa16.23■□□□□ 0.19
TMEM39A-205ENST00000468676 K7ENM7 598 aa16.23■□□□□ 0.19
TMEM39A-205ENST00000468676 TOM1L1O75674 476 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms