RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 UNQ6494/PRO21346Q6UXR6 183 aa5.05□□□□□ -1.6
SSB-208ENST00000468600 GDF7Q7Z4P5 450 aa5.05□□□□□ -1.6
SSB-208ENST00000468600 FAM83AQ86UY5 434 aa5.05□□□□□ -1.6
SSB-208ENST00000468600 UNC5BQ8IZJ1 945 aa5.05□□□□□ -1.6
SSB-208ENST00000468600 NOL10Q9BSC4 688 aaKnown RBP5.05□□□□□ -1.6
SSB-208ENST00000468600 NDC1Q9BTX1 674 aa5.05□□□□□ -1.6
SSB-208ENST00000468600 ZMAT4Q9H898 229 aa5.05□□□□□ -1.6
SSB-208ENST00000468600 USP36Q9P275 1121 aaKnown RBP5.05□□□□□ -1.6
SSB-208ENST00000468600 HDAC5Q9UQL6 1122 aa5.05□□□□□ -1.6
SSB-208ENST00000468600 GAGE12BA1L429 117 aa5.04□□□□□ -1.6
SSB-208ENST00000468600 GAGE12HA6NDE8 117 aa5.04□□□□□ -1.6
SSB-208ENST00000468600 HOXA3O43365 443 aaPredicted RBP5.04□□□□□ -1.6
SSB-208ENST00000468600 F2P00734 622 aa5.04□□□□□ -1.6
SSB-208ENST00000468600 ATP2A2P16615 1042 aaKnown RBP5.04□□□□□ -1.6
SSB-208ENST00000468600 APOBEC3AP31941 199 aaPredicted RBP5.04□□□□□ -1.6
SSB-208ENST00000468600 EFHBQ8N7U6 833 aa5.04□□□□□ -1.6
SSB-208ENST00000468600 BOLLQ8N9W6 283 aaKnown RBP5.04□□□□□ -1.6
SSB-208ENST00000468600 OR52N2Q8NGI0 321 aa5.04□□□□□ -1.6
SSB-208ENST00000468600 POFUT1Q9H488 388 aa5.04□□□□□ -1.6
SSB-208ENST00000468600 AKIP1Q9NQ31 210 aa5.04□□□□□ -1.6
SSB-208ENST00000468600 TOMM22Q9NS69 142 aa5.04□□□□□ -1.6
SSB-208ENST00000468600 SYBUQ9NX95 663 aa5.04□□□□□ -1.6
SSB-208ENST00000468600 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.04□□□□□ -1.6
SSB-208ENST00000468600 MYPNQ86TC9 1320 aa5.03□□□□□ -1.6
SSB-208ENST00000468600 PROB1E7EW31 1015 aa5.03□□□□□ -1.6
SSB-208ENST00000468600 PPP1R12AO14974 1030 aaPredicted RBP5.03□□□□□ -1.6
SSB-208ENST00000468600 DNAJC6O75061 913 aa5.03□□□□□ -1.6
SSB-208ENST00000468600 CD40P25942 277 aa5.03□□□□□ -1.6
SSB-208ENST00000468600 WNT3AP56704 352 aa5.03□□□□□ -1.6
SSB-208ENST00000468600 BLOC1S1P78537 153 aa5.03□□□□□ -1.6
SSB-208ENST00000468600 FAM189BP81408 668 aa5.03□□□□□ -1.6
SSB-208ENST00000468600 PABPC4Q13310 644 aaKnown RBP eCLIP5.03□□□□□ -1.6
SSB-208ENST00000468600 CCDC178Q5BJE1 867 aa5.03□□□□□ -1.6
SSB-208ENST00000468600 GPR158Q5T848 1215 aa5.03□□□□□ -1.6
SSB-208ENST00000468600 SP5Q6BEB4 398 aaPredicted RBP5.03□□□□□ -1.6
SSB-208ENST00000468600 OR5M3Q8NGP4 307 aa5.03□□□□□ -1.6
SSB-208ENST00000468600 SH3TC2Q8TF17 1288 aa5.03□□□□□ -1.6
SSB-208ENST00000468600 RTF1Q92541 710 aaKnown RBP5.03□□□□□ -1.6
SSB-208ENST00000468600 DNAJC2Q99543 621 aaKnown RBP5.03□□□□□ -1.6
SSB-208ENST00000468600 ZKSCAN5Q9Y2L8 839 aa5.03□□□□□ -1.6
SSB-208ENST00000468600 SETD1BQ9UPS6 1966 aaKnown RBP5.03□□□□□ -1.6
SSB-208ENST00000468600 ELL2O00472 640 aaPredicted RBP5.02□□□□□ -1.61
SSB-208ENST00000468600 NCR1O76036 304 aa5.02□□□□□ -1.61
SSB-208ENST00000468600 SEC24DO94855 1032 aaPredicted RBP5.02□□□□□ -1.61
SSB-208ENST00000468600 NDUFA10O95299 355 aa5.02□□□□□ -1.61
SSB-208ENST00000468600 GPR15P49685 360 aa5.02□□□□□ -1.61
SSB-208ENST00000468600 SEC24CP53992 1094 aa5.02□□□□□ -1.61
SSB-208ENST00000468600 GUCY1B3Q02153 619 aa5.02□□□□□ -1.61
SSB-208ENST00000468600 DSG1Q02413 1049 aa5.02□□□□□ -1.61
SSB-208ENST00000468600 MICALCLQ6ZW33 695 aa5.02□□□□□ -1.61
SSB-208ENST00000468600 DOK3Q7L591 496 aa5.02□□□□□ -1.61
SSB-208ENST00000468600 PLXDC1Q8IUK5 500 aa5.02□□□□□ -1.61
SSB-208ENST00000468600 CDYL2Q8N8U2 506 aa5.02□□□□□ -1.61
SSB-208ENST00000468600 LINC00476Q8WZB0 136 aa5.02□□□□□ -1.61
SSB-208ENST00000468600 MRFAP1L1Q96HT8 127 aa5.02□□□□□ -1.61
SSB-208ENST00000468600 CPEB1Q9BZB8 566 aaKnown RBP5.02□□□□□ -1.61
SSB-208ENST00000468600 ING3Q9NXR8 418 aa5.02□□□□□ -1.61
SSB-208ENST00000468600 CLCA2Q9UQC9 943 aa5.02□□□□□ -1.61
SSB-208ENST00000468600 PCDHB6Q9Y5E3 794 aa5.02□□□□□ -1.61
SSB-208ENST00000468600 EPN1Q9Y6I3 576 aaPredicted RBP5.02□□□□□ -1.61
SSB-208ENST00000468600 COL11A2P13942 1736 aaPredicted RBP5.02□□□□□ -1.61
SSB-208ENST00000468600 ALDH1A2O94788 518 aa5.01□□□□□ -1.61
SSB-208ENST00000468600 APOL3O95236 402 aa5.01□□□□□ -1.61
SSB-208ENST00000468600 LY86O95711 162 aa5.01□□□□□ -1.61
SSB-208ENST00000468600 PFKMP08237 780 aa5.01□□□□□ -1.61
SSB-208ENST00000468600 BMPR1AP36894 532 aa5.01□□□□□ -1.61
SSB-208ENST00000468600 MRPL49Q13405 166 aaKnown RBP5.01□□□□□ -1.61
SSB-208ENST00000468600 BMS1Q14692 1282 aaKnown RBP5.01□□□□□ -1.61
SSB-208ENST00000468600 TAS1R1Q7RTX1 841 aa5.01□□□□□ -1.61
SSB-208ENST00000468600 PASD1Q8IV76 773 aa5.01□□□□□ -1.61
SSB-208ENST00000468600 LILRA3Q8N6C8 439 aaPredicted RBP5.01□□□□□ -1.61
SSB-208ENST00000468600 SIMC1Q8NDZ2 872 aa5.01□□□□□ -1.61
SSB-208ENST00000468600 PIK3C3Q8NEB9 887 aa5.01□□□□□ -1.61
SSB-208ENST00000468600 IL17RAQ96F46 866 aa5.01□□□□□ -1.61
SSB-208ENST00000468600 KANSL2Q9H9L4 492 aa5.01□□□□□ -1.61
SSB-208ENST00000468600 IFT57Q9NWB7 429 aa5.01□□□□□ -1.61
SSB-208ENST00000468600 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.01□□□□□ -1.61
SSB-208ENST00000468600 H2AFY2Q9P0M6 372 aaPredicted RBP5.01□□□□□ -1.61
SSB-208ENST00000468600 TESQ9UGI8 421 aaKnown RBP5.01□□□□□ -1.61
SSB-208ENST00000468600 FRMD4BQ9Y2L6 1034 aa5.01□□□□□ -1.61
SSB-208ENST00000468600 FAM83GA6ND36 823 aa5□□□□□ -1.61
SSB-208ENST00000468600 MYADML2A6NDP7 307 aa5□□□□□ -1.61
SSB-208ENST00000468600 DIRC3C9JPN6 131 aa5□□□□□ -1.61
SSB-208ENST00000468600 GAS7O60861 476 aa5□□□□□ -1.61
SSB-208ENST00000468600 ASMTLO95671 621 aa5□□□□□ -1.61
SSB-208ENST00000468600 HLA-DOAP06340 250 aa5□□□□□ -1.61
SSB-208ENST00000468600 SPATA31D3P0C874 917 aa5□□□□□ -1.61
SSB-208ENST00000468600 PHC1P78364 1004 aa5□□□□□ -1.61
SSB-208ENST00000468600 CD69Q07108 199 aa5□□□□□ -1.61
SSB-208ENST00000468600 DDB1Q16531 1140 aa5□□□□□ -1.61
SSB-208ENST00000468600 BEAN1Q3B7T3 259 aa5□□□□□ -1.61
SSB-208ENST00000468600 SPATA31D4Q6ZUB0 917 aa5□□□□□ -1.61
SSB-208ENST00000468600 ESPNLQ6ZVH7 1005 aa5□□□□□ -1.61
SSB-208ENST00000468600 SREK1Q8WXA9 508 aaKnown RBP5□□□□□ -1.61
SSB-208ENST00000468600 SLC9A6Q92581 669 aa5□□□□□ -1.61
SSB-208ENST00000468600 ZNF496Q96IT1 587 aaPredicted RBP5□□□□□ -1.61
SSB-208ENST00000468600 PRR5-ARHGAP8B1AHC4 643 aa4.99□□□□□ -1.61
SSB-208ENST00000468600 ZNF185O15231 689 aa4.99□□□□□ -1.61
SSB-208ENST00000468600 TGM5O43548 720 aa4.99□□□□□ -1.61
SSB-208ENST00000468600 NRP2O60462 931 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms