RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 LAMP2P13473 410 aa13.66□□□□□ -0.22
UBR4-211ENST00000467272 NPEPPSP55786 919 aa13.66□□□□□ -0.22
UBR4-211ENST00000467272 PPP2R5CQ13362 524 aa13.66□□□□□ -0.22
UBR4-211ENST00000467272 PLA2G4FQ68DD2 849 aa13.66□□□□□ -0.22
UBR4-211ENST00000467272 SUMF1Q8NBK3 374 aa13.66□□□□□ -0.22
UBR4-211ENST00000467272 NLRP4Q96MN2 994 aa13.66□□□□□ -0.22
UBR4-211ENST00000467272 JPH2Q9BR39 696 aaPredicted RBP13.66□□□□□ -0.22
UBR4-211ENST00000467272 DDX23Q9BUQ8 820 aaKnown RBP13.66□□□□□ -0.22
UBR4-211ENST00000467272 NT5C3AQ9H0P0 336 aa13.66□□□□□ -0.22
UBR4-211ENST00000467272 UBN1Q9NPG3 1134 aa13.66□□□□□ -0.22
UBR4-211ENST00000467272 MIOSQ9NXC5 875 aa13.66□□□□□ -0.22
UBR4-211ENST00000467272 PCDHA4Q9UN74 947 aa13.66□□□□□ -0.22
UBR4-211ENST00000467272 SSX2IPQ9Y2D8 614 aa13.66□□□□□ -0.22
UBR4-211ENST00000467272 R4GN57 208 aa13.66□□□□□ -0.22
UBR4-211ENST00000467272 ARL5CA6NH57 179 aa13.65□□□□□ -0.22
UBR4-211ENST00000467272 GLUD1P00367 558 aa13.65□□□□□ -0.22
UBR4-211ENST00000467272 URODP06132 367 aa13.65□□□□□ -0.22
UBR4-211ENST00000467272 PDIA3P30101 505 aaKnown RBP13.65□□□□□ -0.22
UBR4-211ENST00000467272 GLUD2P49448 558 aa13.65□□□□□ -0.22
UBR4-211ENST00000467272 STARD6P59095 220 aa13.65□□□□□ -0.22
UBR4-211ENST00000467272 LAMTOR4Q0VGL1 99 aa13.65□□□□□ -0.22
UBR4-211ENST00000467272 PCBP1Q15365 356 aaKnown RBP eCLIP13.65□□□□□ -0.22
UBR4-211ENST00000467272 AMHR2Q16671 573 aa13.65□□□□□ -0.22
UBR4-211ENST00000467272 IFNLR1Q8IU57 520 aaPredicted RBP13.65□□□□□ -0.22
UBR4-211ENST00000467272 FAM177A1Q8N128 213 aaPredicted RBP13.65□□□□□ -0.22
UBR4-211ENST00000467272 GPR152Q8TDT2 470 aa13.65□□□□□ -0.22
UBR4-211ENST00000467272 STAMQ92783 540 aa13.65□□□□□ -0.22
UBR4-211ENST00000467272 PLEKHA4Q9H4M7 779 aa13.65□□□□□ -0.22
UBR4-211ENST00000467272 ZDHHC7Q9NXF8 308 aa13.65□□□□□ -0.22
UBR4-211ENST00000467272 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.65□□□□□ -0.22
UBR4-211ENST00000467272 FNIP2Q9P278 1114 aa13.65□□□□□ -0.22
UBR4-211ENST00000467272 DPP7Q9UHL4 492 aa13.65□□□□□ -0.22
UBR4-211ENST00000467272 IPPQ9Y573 584 aa13.65□□□□□ -0.22
UBR4-211ENST00000467272 SNX14Q9Y5W7 946 aa13.65□□□□□ -0.22
UBR4-211ENST00000467272 FANCMQ8IYD8 2048 aa13.64□□□□□ -0.23
UBR4-211ENST00000467272 CACNA1BQ00975 2339 aa13.64□□□□□ -0.23
UBR4-211ENST00000467272 SPTBN2O15020 2390 aa13.64□□□□□ -0.23
UBR4-211ENST00000467272 POTEMA6NI47 508 aa13.64□□□□□ -0.23
UBR4-211ENST00000467272 TGM5O43548 720 aa13.64□□□□□ -0.23
UBR4-211ENST00000467272 SLC37A4O43826 429 aa13.64□□□□□ -0.23
UBR4-211ENST00000467272 TSPAN1O60635 241 aa13.64□□□□□ -0.23
UBR4-211ENST00000467272 RPS6KB1P23443 525 aa13.64□□□□□ -0.23
UBR4-211ENST00000467272 HSPA4P34932 840 aa13.64□□□□□ -0.23
UBR4-211ENST00000467272 RFC5P40937 340 aa13.64□□□□□ -0.23
UBR4-211ENST00000467272 QARSP47897 775 aaKnown RBP13.64□□□□□ -0.23
UBR4-211ENST00000467272 AK2P54819 239 aa13.64□□□□□ -0.23
UBR4-211ENST00000467272 SPIRE1Q08AE8 756 aa13.64□□□□□ -0.23
UBR4-211ENST00000467272 NONOQ15233 471 aaKnown RBP eCLIP13.64□□□□□ -0.23
UBR4-211ENST00000467272 C1orf210Q8IVY1 113 aa13.64□□□□□ -0.23
UBR4-211ENST00000467272 CNNM3Q8NE01 707 aa13.64□□□□□ -0.23
UBR4-211ENST00000467272 SMG7Q92540 1137 aaKnown RBP13.64□□□□□ -0.23
UBR4-211ENST00000467272 TMEM143Q96AN5 459 aa13.64□□□□□ -0.23
UBR4-211ENST00000467272 SLC26A6Q9BXS9 759 aa13.64□□□□□ -0.23
UBR4-211ENST00000467272 EIF2AQ9BY44 585 aaKnown RBP13.64□□□□□ -0.23
UBR4-211ENST00000467272 C22orf23Q9BZE7 217 aa13.64□□□□□ -0.23
UBR4-211ENST00000467272 GPR62Q9BZJ7 368 aa13.64□□□□□ -0.23
UBR4-211ENST00000467272 PRKD2Q9BZL6 878 aa13.64□□□□□ -0.23
UBR4-211ENST00000467272 ARHGEF3Q9NR81 526 aa13.64□□□□□ -0.23
UBR4-211ENST00000467272 PRG3Q9Y2Y8 225 aaPredicted RBP13.64□□□□□ -0.23
UBR4-211ENST00000467272 CACNA1IQ9P0X4 2223 aa13.63□□□□□ -0.23
UBR4-211ENST00000467272 ZMYM2Q9UBW7 1377 aa13.63□□□□□ -0.23
UBR4-211ENST00000467272 C2CD2LO14523 706 aa13.63□□□□□ -0.23
UBR4-211ENST00000467272 DCNP07585 359 aaKnown RBP13.63□□□□□ -0.23
UBR4-211ENST00000467272 GBP2P32456 591 aaPredicted RBP13.63□□□□□ -0.23
UBR4-211ENST00000467272 PTENP60484 403 aa13.63□□□□□ -0.23
UBR4-211ENST00000467272 POU5F1BQ06416 359 aa13.63□□□□□ -0.23
UBR4-211ENST00000467272 FERMT3Q86UX7 667 aa13.63□□□□□ -0.23
UBR4-211ENST00000467272 SKAP1Q86WV1 359 aa13.63□□□□□ -0.23
UBR4-211ENST00000467272 C4orf19Q8IY42 314 aa13.63□□□□□ -0.23
UBR4-211ENST00000467272 EXOC8Q8IYI6 725 aa13.63□□□□□ -0.23
UBR4-211ENST00000467272 PJA1Q8NG27 643 aa13.63□□□□□ -0.23
UBR4-211ENST00000467272 PSPC1Q8WXF1 523 aaKnown RBP13.63□□□□□ -0.23
UBR4-211ENST00000467272 SLC7A3Q8WY07 619 aa13.63□□□□□ -0.23
UBR4-211ENST00000467272 NELL1Q92832 810 aa13.63□□□□□ -0.23
UBR4-211ENST00000467272 HAS1Q92839 578 aa13.63□□□□□ -0.23
UBR4-211ENST00000467272 CCDC51Q96ER9 411 aa13.63□□□□□ -0.23
UBR4-211ENST00000467272 ZFP42Q96MM3 310 aa13.63□□□□□ -0.23
UBR4-211ENST00000467272 GAD1Q99259 594 aa13.63□□□□□ -0.23
UBR4-211ENST00000467272 RPP25Q9BUL9 199 aaKnown RBP13.63□□□□□ -0.23
UBR4-211ENST00000467272 NCOA5Q9HCD5 579 aaKnown RBP13.63□□□□□ -0.23
UBR4-211ENST00000467272 XPNPEP1Q9NQW7 623 aa13.63□□□□□ -0.23
UBR4-211ENST00000467272 CA14Q9ULX7 337 aa13.63□□□□□ -0.23
UBR4-211ENST00000467272 SIT1Q9Y3P8 196 aa13.63□□□□□ -0.23
UBR4-211ENST00000467272 ZFP37Q9Y6Q3 630 aaPredicted RBP13.63□□□□□ -0.23
UBR4-211ENST00000467272 ASAP2O43150 1006 aa13.62□□□□□ -0.23
UBR4-211ENST00000467272 GAS2O43903 313 aaKnown RBP13.62□□□□□ -0.23
UBR4-211ENST00000467272 ZMYND10O75800 440 aa13.62□□□□□ -0.23
UBR4-211ENST00000467272 P4HBP07237 508 aaKnown RBP13.62□□□□□ -0.23
UBR4-211ENST00000467272 SPATA31D3P0C874 917 aa13.62□□□□□ -0.23
UBR4-211ENST00000467272 SRGAP2CP0DJJ0 459 aa13.62□□□□□ -0.23
UBR4-211ENST00000467272 AXLP30530 894 aa13.62□□□□□ -0.23
UBR4-211ENST00000467272 PUM1Q14671 1186 aaKnown RBP eCLIP13.62□□□□□ -0.236e-7■■■■□ 21.1
UBR4-211ENST00000467272 ZNF528Q3MIS6 628 aa13.62□□□□□ -0.23
UBR4-211ENST00000467272 PPP4R3AQ6IN85 833 aa13.62□□□□□ -0.23
UBR4-211ENST00000467272 SPATA31D4Q6ZUB0 917 aa13.62□□□□□ -0.23
UBR4-211ENST00000467272 DGLUCYQ7Z3D6 616 aa13.62□□□□□ -0.23
UBR4-211ENST00000467272 KIAA2013Q8IYS2 634 aa13.62□□□□□ -0.23
UBR4-211ENST00000467272 BLIDQ8IZY5 108 aa13.62□□□□□ -0.23
UBR4-211ENST00000467272 RIN2Q8WYP3 895 aaPredicted RBP13.62□□□□□ -0.23
UBR4-211ENST00000467272 RUBCNQ92622 972 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms