RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 FMNL3Q8IVF7 1028 aa10.39□□□□□ -0.75
APOBEC1-202ENST00000467171 ACRBPQ8NEB7 543 aa10.39□□□□□ -0.75
APOBEC1-202ENST00000467171 PPTC7Q8NI37 304 aa10.39□□□□□ -0.75
APOBEC1-202ENST00000467171 ASAP3Q8TDY4 903 aa10.39□□□□□ -0.75
APOBEC1-202ENST00000467171 GLG1Q92896 1179 aa10.39□□□□□ -0.75
APOBEC1-202ENST00000467171 VTI1AQ96AJ9 217 aa10.39□□□□□ -0.75
APOBEC1-202ENST00000467171 MAML3Q96JK9 1138 aa10.39□□□□□ -0.75
APOBEC1-202ENST00000467171 CCDC42Q96M95 316 aa10.39□□□□□ -0.75
APOBEC1-202ENST00000467171 CRACR2AQ9BSW2 395 aa10.39□□□□□ -0.75
APOBEC1-202ENST00000467171 KIAA1586Q9HCI6 787 aa10.39□□□□□ -0.75
APOBEC1-202ENST00000467171 SIX2Q9NPC8 291 aa10.39□□□□□ -0.75
APOBEC1-202ENST00000467171 PDGFCQ9NRA1 345 aa10.39□□□□□ -0.75
APOBEC1-202ENST00000467171 ARHGAP20Q9P2F6 1191 aa10.39□□□□□ -0.75
APOBEC1-202ENST00000467171 REXO2Q9Y3B8 237 aaKnown RBP10.39□□□□□ -0.75
APOBEC1-202ENST00000467171 BZW2Q9Y6E2 419 aaKnown RBP10.39□□□□□ -0.75
APOBEC1-202ENST00000467171 SRCAPQ6ZRS2 3230 aa10.39□□□□□ -0.75
APOBEC1-202ENST00000467171 ZBTB42B2RXF5 422 aa10.38□□□□□ -0.75
APOBEC1-202ENST00000467171 ANKRD63C9JTQ0 380 aa10.38□□□□□ -0.75
APOBEC1-202ENST00000467171 RBAK-RBAKDNI3L0D1 243 aa10.38□□□□□ -0.75
APOBEC1-202ENST00000467171 IGF2BP3O00425 579 aaKnown RBP eCLIP10.38□□□□□ -0.75
APOBEC1-202ENST00000467171 ADCY3O60266 1144 aa10.38□□□□□ -0.75
APOBEC1-202ENST00000467171 KIF5CO60282 957 aa10.38□□□□□ -0.75
APOBEC1-202ENST00000467171 TLR2O60603 784 aa10.38□□□□□ -0.75
APOBEC1-202ENST00000467171 SLC9A1P19634 815 aa10.38□□□□□ -0.75
APOBEC1-202ENST00000467171 PRKCIP41743 596 aa10.38□□□□□ -0.75
APOBEC1-202ENST00000467171 EFNA5P52803 228 aa10.38□□□□□ -0.75
APOBEC1-202ENST00000467171 SOX10P56693 466 aa10.38□□□□□ -0.75
APOBEC1-202ENST00000467171 GNG11P61952 73 aa10.38□□□□□ -0.75
APOBEC1-202ENST00000467171 CETN1Q12798 172 aa10.38□□□□□ -0.75
APOBEC1-202ENST00000467171 STRN3Q13033 797 aa10.38□□□□□ -0.75
APOBEC1-202ENST00000467171 MXD4Q14582 209 aaPredicted RBP10.38□□□□□ -0.75
APOBEC1-202ENST00000467171 ARHGAP29Q52LW3 1261 aa10.38□□□□□ -0.75
APOBEC1-202ENST00000467171 ZNF484Q5JVG2 852 aa10.38□□□□□ -0.75
APOBEC1-202ENST00000467171 MORN1Q5T089 497 aa10.38□□□□□ -0.75
APOBEC1-202ENST00000467171 IQSEC1Q6DN90 963 aa10.38□□□□□ -0.75
APOBEC1-202ENST00000467171 SLFN12LQ6IEE8 588 aa10.38□□□□□ -0.75
APOBEC1-202ENST00000467171 SLC39A4Q6P5W5 647 aa10.38□□□□□ -0.75
APOBEC1-202ENST00000467171 C17orf99Q6UX52 265 aa10.38□□□□□ -0.75
APOBEC1-202ENST00000467171 USP37Q86T82 979 aa10.38□□□□□ -0.75
APOBEC1-202ENST00000467171 TXLNBQ8N3L3 684 aa10.38□□□□□ -0.75
APOBEC1-202ENST00000467171 DEPTORQ8TB45 409 aa10.38□□□□□ -0.75
APOBEC1-202ENST00000467171 TMEM143Q96AN5 459 aa10.38□□□□□ -0.75
APOBEC1-202ENST00000467171 MFSD14AQ96MC6 490 aa10.38□□□□□ -0.75
APOBEC1-202ENST00000467171 TINF2Q9BSI4 451 aa10.38□□□□□ -0.75
APOBEC1-202ENST00000467171 KIFC3Q9BVG8 833 aa10.38□□□□□ -0.75
APOBEC1-202ENST00000467171 ABHD16BQ9H3Z7 469 aa10.38□□□□□ -0.75
APOBEC1-202ENST00000467171 ERAP1Q9NZ08 941 aa10.38□□□□□ -0.75
APOBEC1-202ENST00000467171 GCNT4Q9P109 453 aa10.38□□□□□ -0.75
APOBEC1-202ENST00000467171 TISP43B9A030 160 aa10.37□□□□□ -0.75
APOBEC1-202ENST00000467171 ASAP2O43150 1006 aa10.37□□□□□ -0.75
APOBEC1-202ENST00000467171 EXTL3O43909 919 aa10.37□□□□□ -0.75
APOBEC1-202ENST00000467171 PPFIA4O75335 1185 aa10.37□□□□□ -0.75
APOBEC1-202ENST00000467171 EIF4A3P38919 411 aaKnown RBP10.37□□□□□ -0.75
APOBEC1-202ENST00000467171 VAV2P52735 878 aa10.37□□□□□ -0.75
APOBEC1-202ENST00000467171 JAM2P57087 298 aa10.37□□□□□ -0.75
APOBEC1-202ENST00000467171 MYL7Q01449 175 aa10.37□□□□□ -0.75
APOBEC1-202ENST00000467171 MAP2K5Q13163 448 aa10.37□□□□□ -0.75
APOBEC1-202ENST00000467171 TUBB2AQ13885 445 aa10.37□□□□□ -0.75
APOBEC1-202ENST00000467171 SPA17Q15506 151 aa10.37□□□□□ -0.75
APOBEC1-202ENST00000467171 ASIC2Q16515 512 aa10.37□□□□□ -0.75
APOBEC1-202ENST00000467171 SNRNP35Q16560 246 aaKnown RBP10.37□□□□□ -0.75
APOBEC1-202ENST00000467171 DUSP28Q4G0W2 176 aa10.37□□□□□ -0.75
APOBEC1-202ENST00000467171 CBWD6Q4V339 395 aa10.37□□□□□ -0.75
APOBEC1-202ENST00000467171 CBWD3Q5JTY5 395 aa10.37□□□□□ -0.75
APOBEC1-202ENST00000467171 CBWD5Q5RIA9 395 aa10.37□□□□□ -0.75
APOBEC1-202ENST00000467171 C1orf220Q5T0J3 134 aa10.37□□□□□ -0.75
APOBEC1-202ENST00000467171 CDCA2Q69YH5 1023 aaPredicted RBP10.37□□□□□ -0.75
APOBEC1-202ENST00000467171 ZPBP2Q6X784 338 aa10.37□□□□□ -0.75
APOBEC1-202ENST00000467171 TTC13Q8NBP0 860 aa10.37□□□□□ -0.75
APOBEC1-202ENST00000467171 EHBP1Q8NDI1 1231 aa10.37□□□□□ -0.75
APOBEC1-202ENST00000467171 LMO3Q8TAP4 145 aa10.37□□□□□ -0.75
APOBEC1-202ENST00000467171 ZNF592Q92610 1267 aa10.37□□□□□ -0.75
APOBEC1-202ENST00000467171 COPS5Q92905 334 aa10.37□□□□□ -0.75
APOBEC1-202ENST00000467171 CCDC102AQ96A19 550 aa10.37□□□□□ -0.75
APOBEC1-202ENST00000467171 HHIPL1Q96JK4 782 aa10.37□□□□□ -0.75
APOBEC1-202ENST00000467171 TUBB2BQ9BVA1 445 aa10.37□□□□□ -0.75
APOBEC1-202ENST00000467171 STK33Q9BYT3 514 aa10.37□□□□□ -0.75
APOBEC1-202ENST00000467171 TSGA10Q9BZW7 698 aa10.37□□□□□ -0.75
APOBEC1-202ENST00000467171 INTS2Q9H0H0 1204 aaKnown RBP10.37□□□□□ -0.75
APOBEC1-202ENST00000467171 PCIF1Q9H4Z3 704 aa10.37□□□□□ -0.75
APOBEC1-202ENST00000467171 NLRC4Q9NPP4 1024 aa10.37□□□□□ -0.75
APOBEC1-202ENST00000467171 DNAI1Q9UI46 699 aa10.37□□□□□ -0.75
APOBEC1-202ENST00000467171 TLL2Q9Y6L7 1015 aa10.37□□□□□ -0.75
APOBEC1-202ENST00000467171 UQCRHLA0A096LP55 91 aa10.36□□□□□ -0.75
APOBEC1-202ENST00000467171 K7ERI5 159 aa10.36□□□□□ -0.75
APOBEC1-202ENST00000467171 DYNC1I1O14576 645 aa10.36□□□□□ -0.75
APOBEC1-202ENST00000467171 HNRNPDLO14979 420 aaKnown RBP10.36□□□□□ -0.75
APOBEC1-202ENST00000467171 MAGEB2O15479 319 aa10.36□□□□□ -0.75
APOBEC1-202ENST00000467171 PJA2O43164 708 aa10.36□□□□□ -0.75
APOBEC1-202ENST00000467171 CTIFO43310 598 aaKnown RBP10.36□□□□□ -0.75
APOBEC1-202ENST00000467171 GFPT2O94808 682 aa10.36□□□□□ -0.75
APOBEC1-202ENST00000467171 LDHAP00338 332 aaKnown RBP10.36□□□□□ -0.75
APOBEC1-202ENST00000467171 ADRB2P07550 413 aa10.36□□□□□ -0.75
APOBEC1-202ENST00000467171 UQCRHP07919 91 aa10.36□□□□□ -0.75
APOBEC1-202ENST00000467171 TRIM49P0CI25 452 aa10.36□□□□□ -0.75
APOBEC1-202ENST00000467171 TRIM49CP0CI26 452 aa10.36□□□□□ -0.75
APOBEC1-202ENST00000467171 ACTN1P12814 892 aa10.36□□□□□ -0.75
APOBEC1-202ENST00000467171 FERP16591 822 aa10.36□□□□□ -0.75
APOBEC1-202ENST00000467171 CASQ1P31415 396 aa10.36□□□□□ -0.75
APOBEC1-202ENST00000467171 STAT1P42224 750 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms