RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 NPEPPSP55786 919 aa13.18□□□□□ -0.3
CNOT4-208ENST00000465721 PSMC5P62195 406 aa13.18□□□□□ -0.3
CNOT4-208ENST00000465721 DSC1Q08554 894 aa13.18□□□□□ -0.3
CNOT4-208ENST00000465721 NPY5RQ15761 445 aa13.18□□□□□ -0.3
CNOT4-208ENST00000465721 MOXD1Q6UVY6 613 aa13.18□□□□□ -0.3
CNOT4-208ENST00000465721 COLGALT2Q8IYK4 626 aa13.18□□□□□ -0.3
CNOT4-208ENST00000465721 SLC44A3Q8N4M1 653 aa13.18□□□□□ -0.3
CNOT4-208ENST00000465721 ZNF579Q8NAF0 562 aaKnown RBP13.18□□□□□ -0.3
CNOT4-208ENST00000465721 SMG8Q8ND04 991 aaKnown RBP13.18□□□□□ -0.3
CNOT4-208ENST00000465721 RMDN1Q96DB5 314 aa13.18□□□□□ -0.3
CNOT4-208ENST00000465721 JAKMIP1Q96N16 626 aaKnown RBP13.18□□□□□ -0.3
CNOT4-208ENST00000465721 JPH2Q9BR39 696 aaPredicted RBP13.18□□□□□ -0.3
CNOT4-208ENST00000465721 SEMA4AQ9H3S1 761 aa13.18□□□□□ -0.3
CNOT4-208ENST00000465721 RXFP1Q9HBX9 757 aa13.18□□□□□ -0.3
CNOT4-208ENST00000465721 NCOA5Q9HCD5 579 aaKnown RBP13.18□□□□□ -0.3
CNOT4-208ENST00000465721 DLGAP2Q9P1A6 1054 aa13.18□□□□□ -0.3
CNOT4-208ENST00000465721 KANSL3Q9P2N6 904 aa13.18□□□□□ -0.3
CNOT4-208ENST00000465721 WRAP73Q9P2S5 460 aaPredicted RBP13.18□□□□□ -0.3
CNOT4-208ENST00000465721 CA14Q9ULX7 337 aa13.18□□□□□ -0.3
CNOT4-208ENST00000465721 PRG3Q9Y2Y8 225 aaPredicted RBP13.18□□□□□ -0.3
CNOT4-208ENST00000465721 F5P12259 2224 aa13.18□□□□□ -0.3
CNOT4-208ENST00000465721 MED19A0JLT2 244 aaPredicted RBP13.17□□□□□ -0.3
CNOT4-208ENST00000465721 F8W810 466 aa13.17□□□□□ -0.3
CNOT4-208ENST00000465721 EML1O00423 815 aa13.17□□□□□ -0.3
CNOT4-208ENST00000465721 SLC37A4O43826 429 aa13.17□□□□□ -0.3
CNOT4-208ENST00000465721 ALDH2P05091 517 aa13.17□□□□□ -0.3
CNOT4-208ENST00000465721 NCLP19338 710 aaKnown RBP13.17□□□□□ -0.3
CNOT4-208ENST00000465721 GLUD2P49448 558 aa13.17□□□□□ -0.3
CNOT4-208ENST00000465721 NLRP5P59047 1200 aa13.17□□□□□ -0.3
CNOT4-208ENST00000465721 KIAA0319Q5VV43 1072 aa13.17□□□□□ -0.3
CNOT4-208ENST00000465721 SRGAP1Q7Z6B7 1085 aa13.17□□□□□ -0.3
CNOT4-208ENST00000465721 GPR152Q8TDT2 470 aa13.17□□□□□ -0.3
CNOT4-208ENST00000465721 PRPF31Q8WWY3 499 aaKnown RBP13.17□□□□□ -0.3
CNOT4-208ENST00000465721 RIN2Q8WYP3 895 aaPredicted RBP13.17□□□□□ -0.3
CNOT4-208ENST00000465721 SMG7Q92540 1137 aaKnown RBP13.17□□□□□ -0.3
CNOT4-208ENST00000465721 STAMQ92783 540 aa13.17□□□□□ -0.3
CNOT4-208ENST00000465721 FAM193BQ96PV7 902 aaPredicted RBP13.17□□□□□ -0.3
CNOT4-208ENST00000465721 C22orf23Q9BZE7 217 aa13.17□□□□□ -0.3
CNOT4-208ENST00000465721 DHX33Q9H6R0 707 aaKnown RBP13.17□□□□□ -0.3
CNOT4-208ENST00000465721 VAV3Q9UKW4 847 aa13.17□□□□□ -0.3
CNOT4-208ENST00000465721 PCDHA4Q9UN74 947 aa13.17□□□□□ -0.3
CNOT4-208ENST00000465721 MYBP10242 640 aa13.16□□□□□ -0.3
CNOT4-208ENST00000465721 RPS6KB1P23443 525 aa13.16□□□□□ -0.3
CNOT4-208ENST00000465721 MLH1P40692 756 aa13.16□□□□□ -0.3
CNOT4-208ENST00000465721 OR1G1P47890 313 aa13.16□□□□□ -0.3
CNOT4-208ENST00000465721 QARSP47897 775 aaKnown RBP13.16□□□□□ -0.3
CNOT4-208ENST00000465721 DSG1Q02413 1049 aa13.16□□□□□ -0.3
CNOT4-208ENST00000465721 LAMTOR4Q0VGL1 99 aa13.16□□□□□ -0.3
CNOT4-208ENST00000465721 PPP2R5CQ13362 524 aa13.16□□□□□ -0.3
CNOT4-208ENST00000465721 HTR4Q13639 388 aa13.16□□□□□ -0.3
CNOT4-208ENST00000465721 NONOQ15233 471 aaKnown RBP eCLIP13.16□□□□□ -0.3
CNOT4-208ENST00000465721 PHLDB3Q6NSJ2 640 aa13.16□□□□□ -0.3
CNOT4-208ENST00000465721 BLOC1S2Q6QNY1 142 aa13.16□□□□□ -0.3
CNOT4-208ENST00000465721 POTEGQ6S5H5 508 aa13.16□□□□□ -0.3
CNOT4-208ENST00000465721 DAGLBQ8NCG7 672 aa13.16□□□□□ -0.3
CNOT4-208ENST00000465721 PSPC1Q8WXF1 523 aaKnown RBP13.16□□□□□ -0.3
CNOT4-208ENST00000465721 SLC7A3Q8WY07 619 aa13.16□□□□□ -0.3
CNOT4-208ENST00000465721 NXPE3Q969Y0 559 aa13.16□□□□□ -0.3
CNOT4-208ENST00000465721 TMEM143Q96AN5 459 aa13.16□□□□□ -0.3
CNOT4-208ENST00000465721 EIF2AQ9BY44 585 aaKnown RBP13.16□□□□□ -0.3
CNOT4-208ENST00000465721 ARHGEF3Q9NR81 526 aa13.16□□□□□ -0.3
CNOT4-208ENST00000465721 BMP2KQ9NSY1 1161 aaPredicted RBP13.16□□□□□ -0.3
CNOT4-208ENST00000465721 SSX2IPQ9Y2D8 614 aa13.16□□□□□ -0.3
CNOT4-208ENST00000465721 IPPQ9Y573 584 aa13.16□□□□□ -0.3
CNOT4-208ENST00000465721 SNX14Q9Y5W7 946 aa13.16□□□□□ -0.3
CNOT4-208ENST00000465721 ARL5CA6NH57 179 aa13.15□□□□□ -0.3
CNOT4-208ENST00000465721 ANHXE9PGG2 379 aa13.15□□□□□ -0.3
CNOT4-208ENST00000465721 STK25O00506 426 aa13.15□□□□□ -0.3
CNOT4-208ENST00000465721 TSPAN1O60635 241 aa13.15□□□□□ -0.3
CNOT4-208ENST00000465721 CDC45O75419 566 aa13.15□□□□□ -0.3
CNOT4-208ENST00000465721 DCNP07585 359 aaKnown RBP13.15□□□□□ -0.3
CNOT4-208ENST00000465721 SPATA31D3P0C874 917 aa13.15□□□□□ -0.3
CNOT4-208ENST00000465721 SRGAP2CP0DJJ0 459 aa13.15□□□□□ -0.3
CNOT4-208ENST00000465721 ITGA4P13612 1032 aa13.15□□□□□ -0.3
CNOT4-208ENST00000465721 RFX1P22670 979 aa13.15□□□□□ -0.3
CNOT4-208ENST00000465721 PDIA3P30101 505 aaKnown RBP13.15□□□□□ -0.3
CNOT4-208ENST00000465721 HSPA4P34932 840 aa13.15□□□□□ -0.3
CNOT4-208ENST00000465721 SCNN1GP51170 649 aa13.15□□□□□ -0.3
CNOT4-208ENST00000465721 EVCP57679 992 aa13.15□□□□□ -0.3
CNOT4-208ENST00000465721 CCT2P78371 535 aaKnown RBP13.15□□□□□ -0.3
CNOT4-208ENST00000465721 EMC2Q15006 297 aa13.15□□□□□ -0.3
CNOT4-208ENST00000465721 ELMSAN1Q6PJG2 1045 aa13.15□□□□□ -0.3
CNOT4-208ENST00000465721 SPATA31D4Q6ZUB0 917 aa13.15□□□□□ -0.3
CNOT4-208ENST00000465721 GET4Q7L5D6 327 aaPredicted RBP13.15□□□□□ -0.3
CNOT4-208ENST00000465721 BLIDQ8IZY5 108 aa13.15□□□□□ -0.3
CNOT4-208ENST00000465721 CNNM3Q8NE01 707 aa13.15□□□□□ -0.3
CNOT4-208ENST00000465721 KCNG4Q8TDN1 519 aa13.15□□□□□ -0.3
CNOT4-208ENST00000465721 HDAC7Q8WUI4 952 aa13.15□□□□□ -0.3
CNOT4-208ENST00000465721 CEP170P1Q96L14 293 aa13.15□□□□□ -0.3
CNOT4-208ENST00000465721 B3GALT6Q96L58 329 aa13.15□□□□□ -0.3
CNOT4-208ENST00000465721 ZFP42Q96MM3 310 aa13.15□□□□□ -0.3
CNOT4-208ENST00000465721 GAD1Q99259 594 aa13.15□□□□□ -0.3
CNOT4-208ENST00000465721 NT5C3AQ9H0P0 336 aa13.15□□□□□ -0.3
CNOT4-208ENST00000465721 KCNMB3Q9NPA1 279 aa13.15□□□□□ -0.3
CNOT4-208ENST00000465721 CHST7Q9NS84 486 aa13.15□□□□□ -0.3
CNOT4-208ENST00000465721 MIOSQ9NXC5 875 aa13.15□□□□□ -0.3
CNOT4-208ENST00000465721 DDX25Q9UHL0 483 aaKnown RBP13.15□□□□□ -0.3
CNOT4-208ENST00000465721 DPP7Q9UHL4 492 aa13.15□□□□□ -0.3
CNOT4-208ENST00000465721 PPME1Q9Y570 386 aa13.15□□□□□ -0.3
CNOT4-208ENST00000465721 COL4A2P08572 1712 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms