RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 VAV3Q9UKW4 847 aa11.54□□□□□ -0.56
GPNMB-206ENST00000465673 ZNF292O60281 2723 aa11.54□□□□□ -0.56
GPNMB-206ENST00000465673 CLUHO75153 1309 aa11.54□□□□□ -0.56
GPNMB-206ENST00000465673 MED19A0JLT2 244 aaPredicted RBP11.53□□□□□ -0.56
GPNMB-206ENST00000465673 ARL5CA6NH57 179 aa11.53□□□□□ -0.56
GPNMB-206ENST00000465673 LRRN2O75325 713 aa11.53□□□□□ -0.56
GPNMB-206ENST00000465673 CDC45O75419 566 aa11.53□□□□□ -0.56
GPNMB-206ENST00000465673 EFEMP2O95967 443 aa11.53□□□□□ -0.56
GPNMB-206ENST00000465673 GLUD1P00367 558 aa11.53□□□□□ -0.56
GPNMB-206ENST00000465673 ITGA4P13612 1032 aa11.53□□□□□ -0.56
GPNMB-206ENST00000465673 RPL17P18621 184 aaKnown RBP11.53□□□□□ -0.56
GPNMB-206ENST00000465673 NCLP19338 710 aaKnown RBP11.53□□□□□ -0.56
GPNMB-206ENST00000465673 HSPA4P34932 840 aa11.53□□□□□ -0.56
GPNMB-206ENST00000465673 MLH1P40692 756 aa11.53□□□□□ -0.56
GPNMB-206ENST00000465673 QARSP47897 775 aaKnown RBP11.53□□□□□ -0.56
GPNMB-206ENST00000465673 SCNN1GP51170 649 aa11.53□□□□□ -0.56
GPNMB-206ENST00000465673 ERMP1Q7Z2K6 904 aa11.53□□□□□ -0.56
GPNMB-206ENST00000465673 CDR2LQ86X02 465 aaPredicted RBP11.53□□□□□ -0.56
GPNMB-206ENST00000465673 KIAA2013Q8IYS2 634 aa11.53□□□□□ -0.56
GPNMB-206ENST00000465673 RNF168Q8IYW5 571 aaPredicted RBP11.53□□□□□ -0.56
GPNMB-206ENST00000465673 DCLK2Q8N568 766 aa11.53□□□□□ -0.56
GPNMB-206ENST00000465673 RNF149Q8NC42 400 aa11.53□□□□□ -0.56
GPNMB-206ENST00000465673 CMASQ8NFW8 434 aaPredicted RBP11.53□□□□□ -0.56
GPNMB-206ENST00000465673 RSPH1Q8WYR4 309 aa11.53□□□□□ -0.56
GPNMB-206ENST00000465673 AGXT2Q9BYV1 514 aa11.53□□□□□ -0.56
GPNMB-206ENST00000465673 GPR62Q9BZJ7 368 aa11.53□□□□□ -0.56
GPNMB-206ENST00000465673 SLKQ9H2G2 1235 aaPredicted RBP11.53□□□□□ -0.56
GPNMB-206ENST00000465673 DHX33Q9H6R0 707 aaKnown RBP11.53□□□□□ -0.56
GPNMB-206ENST00000465673 SH3GLB2Q9NR46 395 aa11.53□□□□□ -0.56
GPNMB-206ENST00000465673 RGL1Q9NZL6 768 aa11.53□□□□□ -0.56
GPNMB-206ENST00000465673 KANSL3Q9P2N6 904 aa11.53□□□□□ -0.56
GPNMB-206ENST00000465673 KCNJ14Q9UNX9 436 aa11.53□□□□□ -0.56
GPNMB-206ENST00000465673 IPPQ9Y573 584 aa11.53□□□□□ -0.56
GPNMB-206ENST00000465673 CACNA1AO00555 2505 aa11.53□□□□□ -0.56
GPNMB-206ENST00000465673 COL4A3Q01955 1670 aa11.52□□□□□ -0.56
GPNMB-206ENST00000465673 CARNS1A5YM72 827 aa11.52□□□□□ -0.57
GPNMB-206ENST00000465673 POTEMA6NI47 508 aa11.52□□□□□ -0.57
GPNMB-206ENST00000465673 GAS2O43903 313 aaKnown RBP11.52□□□□□ -0.57
GPNMB-206ENST00000465673 LMNAP02545 664 aaKnown RBP11.52□□□□□ -0.57
GPNMB-206ENST00000465673 ADH1AP07327 375 aa11.52□□□□□ -0.57
GPNMB-206ENST00000465673 GLULP15104 373 aa11.52□□□□□ -0.57
GPNMB-206ENST00000465673 RFX1P22670 979 aa11.52□□□□□ -0.57
GPNMB-206ENST00000465673 GLUD2P49448 558 aa11.52□□□□□ -0.57
GPNMB-206ENST00000465673 DSC1Q08554 894 aa11.52□□□□□ -0.57
GPNMB-206ENST00000465673 SSRP1Q08945 709 aaKnown RBP11.52□□□□□ -0.57
GPNMB-206ENST00000465673 TOB2Q14106 344 aaPredicted RBP11.52□□□□□ -0.57
GPNMB-206ENST00000465673 GET4Q7L5D6 327 aaPredicted RBP11.52□□□□□ -0.57
GPNMB-206ENST00000465673 SRGAP1Q7Z6B7 1085 aa11.52□□□□□ -0.57
GPNMB-206ENST00000465673 PSPC1Q8WXF1 523 aaKnown RBP11.52□□□□□ -0.57
GPNMB-206ENST00000465673 SLC7A3Q8WY07 619 aa11.52□□□□□ -0.57
GPNMB-206ENST00000465673 FOXQ1Q9C009 403 aa11.52□□□□□ -0.57
GPNMB-206ENST00000465673 NT5C3AQ9H0P0 336 aa11.52□□□□□ -0.57
GPNMB-206ENST00000465673 PIDD1Q9HB75 910 aa11.52□□□□□ -0.57
GPNMB-206ENST00000465673 RXFP1Q9HBX9 757 aa11.52□□□□□ -0.57
GPNMB-206ENST00000465673 GJB4Q9NTQ9 266 aa11.52□□□□□ -0.57
GPNMB-206ENST00000465673 EPS15L1Q9UBC2 864 aa11.52□□□□□ -0.57
GPNMB-206ENST00000465673 CNTNAP2Q9UHC6 1331 aa11.52□□□□□ -0.57
GPNMB-206ENST00000465673 DOCK8Q8NF50 2099 aa11.51□□□□□ -0.57
GPNMB-206ENST00000465673 A0A087WWV3 80 aa11.51□□□□□ -0.57
GPNMB-206ENST00000465673 TGM5O43548 720 aa11.51□□□□□ -0.57
GPNMB-206ENST00000465673 TSPAN1O60635 241 aa11.51□□□□□ -0.57
GPNMB-206ENST00000465673 SRFP11831 508 aa11.51□□□□□ -0.57
GPNMB-206ENST00000465673 LAMP2P13473 410 aa11.51□□□□□ -0.57
GPNMB-206ENST00000465673 AKAP5P24588 427 aa11.51□□□□□ -0.57
GPNMB-206ENST00000465673 YWHABP31946 246 aaKnown RBP11.51□□□□□ -0.57
GPNMB-206ENST00000465673 EVCP57679 992 aa11.51□□□□□ -0.57
GPNMB-206ENST00000465673 NTHL1P78549 312 aa11.51□□□□□ -0.57
GPNMB-206ENST00000465673 DSG1Q02413 1049 aa11.51□□□□□ -0.57
GPNMB-206ENST00000465673 CYP4A11Q02928 519 aa11.51□□□□□ -0.57
GPNMB-206ENST00000465673 STK3Q13188 491 aa11.51□□□□□ -0.57
GPNMB-206ENST00000465673 PPP2R5CQ13362 524 aa11.51□□□□□ -0.57
GPNMB-206ENST00000465673 CTTNQ14247 550 aaKnown RBP11.51□□□□□ -0.57
GPNMB-206ENST00000465673 EMC2Q15006 297 aa11.51□□□□□ -0.57
GPNMB-206ENST00000465673 NONOQ15233 471 aaKnown RBP eCLIP11.51□□□□□ -0.57
GPNMB-206ENST00000465673 FERMT3Q86UX7 667 aa11.51□□□□□ -0.57
GPNMB-206ENST00000465673 FBXL16Q8N461 479 aa11.51□□□□□ -0.57
GPNMB-206ENST00000465673 GSTCDQ8NEC7 633 aa11.51□□□□□ -0.57
GPNMB-206ENST00000465673 HAS1Q92839 578 aa11.51□□□□□ -0.57
GPNMB-206ENST00000465673 DYDC2Q96IM9 177 aa11.51□□□□□ -0.57
GPNMB-206ENST00000465673 JPH2Q9BR39 696 aaPredicted RBP11.51□□□□□ -0.57
GPNMB-206ENST00000465673 NXF3Q9H4D5 531 aaKnown RBP11.51□□□□□ -0.57
GPNMB-206ENST00000465673 KCNMB3Q9NPA1 279 aa11.51□□□□□ -0.57
GPNMB-206ENST00000465673 XPNPEP1Q9NQW7 623 aa11.51□□□□□ -0.57
GPNMB-206ENST00000465673 CHST7Q9NS84 486 aa11.51□□□□□ -0.57
GPNMB-206ENST00000465673 KLK14Q9P0G3 267 aa11.51□□□□□ -0.57
GPNMB-206ENST00000465673 DLGAP2Q9P1A6 1054 aa11.51□□□□□ -0.57
GPNMB-206ENST00000465673 NUMBLQ9Y6R0 609 aa11.51□□□□□ -0.57
GPNMB-206ENST00000465673 GPR179Q6PRD1 2367 aa11.51□□□□□ -0.57
GPNMB-206ENST00000465673 DOCK6Q96HP0 2047 aa11.51□□□□□ -0.57
GPNMB-206ENST00000465673 DMXL1Q9Y485 3027 aa11.5□□□□□ -0.57
GPNMB-206ENST00000465673 ANHXE9PGG2 379 aa11.5□□□□□ -0.57
GPNMB-206ENST00000465673 B4GALT5O43286 388 aa11.5□□□□□ -0.57
GPNMB-206ENST00000465673 ERLIN2O94905 339 aa11.5□□□□□ -0.57
GPNMB-206ENST00000465673 P4HBP07237 508 aaKnown RBP11.5□□□□□ -0.57
GPNMB-206ENST00000465673 SP9P0CG40 484 aa11.5□□□□□ -0.57
GPNMB-206ENST00000465673 GPC5P78333 572 aa11.5□□□□□ -0.57
GPNMB-206ENST00000465673 HTR4Q13639 388 aa11.5□□□□□ -0.57
GPNMB-206ENST00000465673 XKR9Q5GH70 373 aa11.5□□□□□ -0.57
GPNMB-206ENST00000465673 EARS2Q5JPH6 523 aaKnown RBP11.5□□□□□ -0.57
GPNMB-206ENST00000465673 LILRA6Q6PI73 481 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms