RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 DRC7Q8IY82 874 aa15.28■□□□□ 0.04
HDAC6-215ENST00000465457 MMTAG2Q9BU76 263 aaKnown RBP15.28■□□□□ 0.04
HDAC6-215ENST00000465457 POMKQ9H5K3 350 aa15.28■□□□□ 0.04
HDAC6-215ENST00000465457 IMPACTQ9P2X3 320 aa15.28■□□□□ 0.04
HDAC6-215ENST00000465457 A0A087WWV3 80 aa15.27■□□□□ 0.04
HDAC6-215ENST00000465457 MBLAC1A4D2B0 266 aaPredicted RBP15.27■□□□□ 0.04
HDAC6-215ENST00000465457 HIDE1A8MVS5 230 aa15.27■□□□□ 0.04
HDAC6-215ENST00000465457 MGEA5O60502 916 aa15.27■□□□□ 0.04
HDAC6-215ENST00000465457 FGF18O76093 207 aa15.27■□□□□ 0.04
HDAC6-215ENST00000465457 RHOBTB3O94955 611 aa15.27■□□□□ 0.04
HDAC6-215ENST00000465457 WEE2P0C1S8 567 aa15.27■□□□□ 0.04
HDAC6-215ENST00000465457 TCF7P36402 384 aaPredicted RBP15.27■□□□□ 0.04
HDAC6-215ENST00000465457 ZNF76P36508 570 aa15.27■□□□□ 0.04
HDAC6-215ENST00000465457 IGBP1P78318 339 aa15.27■□□□□ 0.04
HDAC6-215ENST00000465457 MRPS6P82932 125 aaKnown RBP15.27■□□□□ 0.04
HDAC6-215ENST00000465457 ISM2Q6H9L7 571 aa15.27■□□□□ 0.04
HDAC6-215ENST00000465457 SV2BQ7L1I2 683 aa15.27■□□□□ 0.04
HDAC6-215ENST00000465457 ETNPPLQ8TBG4 499 aa15.27■□□□□ 0.04
HDAC6-215ENST00000465457 PADI3Q9ULW8 664 aa15.27■□□□□ 0.04
HDAC6-215ENST00000465457 SORCS3Q9UPU3 1222 aa15.27■□□□□ 0.04
HDAC6-215ENST00000465457 EVPLQ92817 2033 aa15.27■□□□□ 0.03
HDAC6-215ENST00000465457 C2orf16Q68DN1 1984 aa15.26■□□□□ 0.03
HDAC6-215ENST00000465457 PVALEFA0A1B0GWK0 134 aa15.26■□□□□ 0.03
HDAC6-215ENST00000465457 CDC25AP30304 524 aa15.26■□□□□ 0.03
HDAC6-215ENST00000465457 GSDMDP57764 484 aa15.26■□□□□ 0.03
HDAC6-215ENST00000465457 SPAG1Q07617 926 aa15.26■□□□□ 0.03
HDAC6-215ENST00000465457 CUL4BQ13620 913 aa15.26■□□□□ 0.03
HDAC6-215ENST00000465457 NEDD9Q14511 834 aa15.26■□□□□ 0.03
HDAC6-215ENST00000465457 COBLL1Q53SF7 1204 aa15.26■□□□□ 0.03
HDAC6-215ENST00000465457 PRR16Q569H4 304 aa15.26■□□□□ 0.03
HDAC6-215ENST00000465457 SPATA1Q5VX52 437 aa15.26■□□□□ 0.03
HDAC6-215ENST00000465457 ASTLQ6HA08 431 aaPredicted RBP15.26■□□□□ 0.03
HDAC6-215ENST00000465457 NIPA1Q7RTP0 329 aa15.26■□□□□ 0.03
HDAC6-215ENST00000465457 LARP4BQ92615 738 aaKnown RBP15.26■□□□□ 0.03
HDAC6-215ENST00000465457 MTRQ99707 1265 aa15.26■□□□□ 0.03
HDAC6-215ENST00000465457 TRIM9Q9C026 710 aa15.26■□□□□ 0.03
HDAC6-215ENST00000465457 RWDD2AQ9UIY3 292 aa15.26■□□□□ 0.03
HDAC6-215ENST00000465457 NFE2L3Q9Y4A8 694 aa15.26■□□□□ 0.03
HDAC6-215ENST00000465457 ACACBO00763 2458 aa15.25■□□□□ 0.03
HDAC6-215ENST00000465457 POTEMA6NI47 508 aa15.25■□□□□ 0.03
HDAC6-215ENST00000465457 PI15O43692 258 aa15.25■□□□□ 0.03
HDAC6-215ENST00000465457 GNPTABQ3T906 1256 aa15.25■□□□□ 0.03
HDAC6-215ENST00000465457 FAM102BQ5T8I3 360 aa15.25■□□□□ 0.03
HDAC6-215ENST00000465457 XRRA1Q6P2D8 792 aa15.25■□□□□ 0.03
HDAC6-215ENST00000465457 TMEM184AQ6ZMB5 413 aa15.25■□□□□ 0.03
HDAC6-215ENST00000465457 COLGALT1Q8NBJ5 622 aa15.25■□□□□ 0.03
HDAC6-215ENST00000465457 TRAPPC12Q8WVT3 735 aa15.25■□□□□ 0.03
HDAC6-215ENST00000465457 RAD54LQ92698 747 aa15.25■□□□□ 0.03
HDAC6-215ENST00000465457 BLZF1Q9H2G9 400 aa15.25■□□□□ 0.03
HDAC6-215ENST00000465457 BMP2KQ9NSY1 1161 aaPredicted RBP15.25■□□□□ 0.03
HDAC6-215ENST00000465457 EXOC1Q9NV70 894 aa15.25■□□□□ 0.03
HDAC6-215ENST00000465457 FANCMQ8IYD8 2048 aa15.25■□□□□ 0.03
HDAC6-215ENST00000465457 MAP1BP46821 2468 aaKnown RBP15.24■□□□□ 0.03
HDAC6-215ENST00000465457 IGSF9BQ9UPX0 1349 aa15.24■□□□□ 0.03
HDAC6-215ENST00000465457 GSTTP1A0A1W2PQM5 241 aa15.24■□□□□ 0.03
HDAC6-215ENST00000465457 TBKBP1A7MCY6 615 aa15.24■□□□□ 0.03
HDAC6-215ENST00000465457 PSMA7O14818 248 aa15.24■□□□□ 0.03
HDAC6-215ENST00000465457 ATP9AO75110 1047 aa15.24■□□□□ 0.03
HDAC6-215ENST00000465457 SERPINC1P01008 464 aa15.24■□□□□ 0.03
HDAC6-215ENST00000465457 MUTP22033 750 aa15.24■□□□□ 0.03
HDAC6-215ENST00000465457 CCT6AP40227 531 aaKnown RBP15.24■□□□□ 0.03
HDAC6-215ENST00000465457 PBX3P40426 434 aa15.24■□□□□ 0.03
HDAC6-215ENST00000465457 FANCCQ00597 558 aa15.24■□□□□ 0.03
HDAC6-215ENST00000465457 PAK1Q13153 545 aa15.24■□□□□ 0.03
HDAC6-215ENST00000465457 SPOUT1Q5T280 376 aaKnown RBP15.24■□□□□ 0.03
HDAC6-215ENST00000465457 RSPH3Q86UC2 560 aa15.24■□□□□ 0.03
HDAC6-215ENST00000465457 UBALD2Q8IYN6 164 aa15.24■□□□□ 0.03
HDAC6-215ENST00000465457 THNSL1Q8IYQ7 743 aa15.24■□□□□ 0.03
HDAC6-215ENST00000465457 GIMAP8Q8ND71 665 aaPredicted RBP15.24■□□□□ 0.03
HDAC6-215ENST00000465457 LENG9Q96B70 501 aa15.24■□□□□ 0.03
HDAC6-215ENST00000465457 PNMA5Q96PV4 448 aa15.24■□□□□ 0.03
HDAC6-215ENST00000465457 CDCA3Q99618 268 aaPredicted RBP15.24■□□□□ 0.03
HDAC6-215ENST00000465457 PKD2L1Q9P0L9 805 aa15.24■□□□□ 0.03
HDAC6-215ENST00000465457 CACNA1GO43497 2377 aa15.24■□□□□ 0.03
HDAC6-215ENST00000465457 GPR179Q6PRD1 2367 aa15.23■□□□□ 0.03
HDAC6-215ENST00000465457 IGLV3-22A0A075B6J6 115 aa15.23■□□□□ 0.03
HDAC6-215ENST00000465457 PPP1R3GB7ZBB8 358 aa15.23■□□□□ 0.03
HDAC6-215ENST00000465457 FAM86B1E9PN63 330 aa15.23■□□□□ 0.03
HDAC6-215ENST00000465457 KLRC4O43908 158 aa15.23■□□□□ 0.03
HDAC6-215ENST00000465457 ZNF500O60304 480 aaPredicted RBP15.23■□□□□ 0.03
HDAC6-215ENST00000465457 FAM86B2P0C5J1 330 aa15.23■□□□□ 0.03
HDAC6-215ENST00000465457 STAG3L1P0CL83 205 aa15.23■□□□□ 0.03
HDAC6-215ENST00000465457 ZNF18P17022 549 aa15.23■□□□□ 0.03
HDAC6-215ENST00000465457 CLCN1P35523 988 aa15.23■□□□□ 0.03
HDAC6-215ENST00000465457 ASIC1P78348 528 aa15.23■□□□□ 0.03
HDAC6-215ENST00000465457 UBE3AQ05086 875 aa15.23■□□□□ 0.03
HDAC6-215ENST00000465457 PAK2Q13177 524 aa15.23■□□□□ 0.03
HDAC6-215ENST00000465457 PSMD2Q13200 908 aa15.23■□□□□ 0.03
HDAC6-215ENST00000465457 KMT5BQ4FZB7 885 aa15.23■□□□□ 0.03
HDAC6-215ENST00000465457 CEP55Q53EZ4 464 aa15.23■□□□□ 0.03
HDAC6-215ENST00000465457 ANKRD20A12PQ8NF67 263 aa15.23■□□□□ 0.03
HDAC6-215ENST00000465457 FLCNQ8NFG4 579 aa15.23■□□□□ 0.03
HDAC6-215ENST00000465457 NOC3LQ8WTT2 800 aaKnown RBP15.23■□□□□ 0.03
HDAC6-215ENST00000465457 STAMQ92783 540 aa15.23■□□□□ 0.03
HDAC6-215ENST00000465457 DHTKD1Q96HY7 919 aaPredicted RBP15.23■□□□□ 0.03
HDAC6-215ENST00000465457 TCF25Q9BQ70 676 aa15.23■□□□□ 0.03
HDAC6-215ENST00000465457 FTHL17Q9BXU8 183 aa15.23■□□□□ 0.03
HDAC6-215ENST00000465457 HSD3B7Q9H2F3 369 aa15.23■□□□□ 0.03
HDAC6-215ENST00000465457 FANCLQ9NW38 375 aa15.23■□□□□ 0.03
HDAC6-215ENST00000465457 IFNKQ9P0W0 207 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms