RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 NRDE2Q9H7Z3 1164 aa13.47□□□□□ -0.25
XRN1-204ENST00000465074 PRMT7Q9NVM4 692 aaPredicted RBP13.47□□□□□ -0.25
XRN1-204ENST00000465074 PARP2Q9UGN5 583 aa13.47□□□□□ -0.25
XRN1-204ENST00000465074 CNTNAP2Q9UHC6 1331 aa13.46□□□□□ -0.25
XRN1-204ENST00000465074 CUL9Q8IWT3 2517 aa13.46□□□□□ -0.25
XRN1-204ENST00000465074 MYH11P35749 1972 aa13.46□□□□□ -0.25
XRN1-204ENST00000465074 ARL5CA6NH57 179 aa13.46□□□□□ -0.25
XRN1-204ENST00000465074 TTLL13PA6NNM8 815 aa13.46□□□□□ -0.25
XRN1-204ENST00000465074 TNFRSF10AO00220 468 aa13.46□□□□□ -0.25
XRN1-204ENST00000465074 NCK2O43639 380 aa13.46□□□□□ -0.25
XRN1-204ENST00000465074 HIP1RO75146 1068 aa13.46□□□□□ -0.25
XRN1-204ENST00000465074 DDHD2O94830 711 aa13.46□□□□□ -0.25
XRN1-204ENST00000465074 NCLP19338 710 aaKnown RBP13.46□□□□□ -0.25
XRN1-204ENST00000465074 MLH1P40692 756 aa13.46□□□□□ -0.25
XRN1-204ENST00000465074 NAMPTP43490 491 aa13.46□□□□□ -0.25
XRN1-204ENST00000465074 PLCB3Q01970 1234 aa13.46□□□□□ -0.25
XRN1-204ENST00000465074 DLX2Q07687 328 aaPredicted RBP13.46□□□□□ -0.25
XRN1-204ENST00000465074 LEXMQ3ZCV2 418 aa13.46□□□□□ -0.25
XRN1-204ENST00000465074 ARL6IP4Q66PJ3 421 aaKnown RBP13.46□□□□□ -0.25
XRN1-204ENST00000465074 LLGL2Q6P1M3 1020 aa13.46□□□□□ -0.25
XRN1-204ENST00000465074 SLC27A1Q6PCB7 646 aa13.46□□□□□ -0.25
XRN1-204ENST00000465074 SLC39A11Q8N1S5 342 aa13.46□□□□□ -0.25
XRN1-204ENST00000465074 PIP4P2Q8N4L2 257 aa13.46□□□□□ -0.25
XRN1-204ENST00000465074 CCDC51Q96ER9 411 aa13.46□□□□□ -0.25
XRN1-204ENST00000465074 CALML4Q96GE6 196 aa13.46□□□□□ -0.25
XRN1-204ENST00000465074 PNMA5Q96PV4 448 aa13.46□□□□□ -0.25
XRN1-204ENST00000465074 NFKBIZQ9BYH8 718 aa13.46□□□□□ -0.25
XRN1-204ENST00000465074 UBN1Q9NPG3 1134 aa13.46□□□□□ -0.25
XRN1-204ENST00000465074 CLIC4Q9Y696 253 aa13.46□□□□□ -0.25
XRN1-204ENST00000465074 TDRD15B5MCY1 1934 aaKnown RBP13.46□□□□□ -0.25
XRN1-204ENST00000465074 BRWD1Q9NSI6 2320 aa13.46□□□□□ -0.26
XRN1-204ENST00000465074 VCANP13611 3396 aa13.46□□□□□ -0.26
XRN1-204ENST00000465074 NPHP3-ACAD11A0A0J9YXS1 232 aa13.45□□□□□ -0.26
XRN1-204ENST00000465074 HIDE1A8MVS5 230 aa13.45□□□□□ -0.26
XRN1-204ENST00000465074 K7ERI5 159 aa13.45□□□□□ -0.26
XRN1-204ENST00000465074 CXCL14O95715 111 aa13.45□□□□□ -0.26
XRN1-204ENST00000465074 ALDH2P05091 517 aa13.45□□□□□ -0.26
XRN1-204ENST00000465074 GALTP07902 379 aa13.45□□□□□ -0.26
XRN1-204ENST00000465074 IL9P15248 144 aa13.45□□□□□ -0.26
XRN1-204ENST00000465074 MARCKSP29966 332 aaPredicted RBP13.45□□□□□ -0.26
XRN1-204ENST00000465074 OR1G1P47890 313 aa13.45□□□□□ -0.26
XRN1-204ENST00000465074 SLC11A1P49279 550 aa13.45□□□□□ -0.26
XRN1-204ENST00000465074 SCNN1GP51170 649 aa13.45□□□□□ -0.26
XRN1-204ENST00000465074 RBM10P98175 930 aaKnown RBP13.45□□□□□ -0.26
XRN1-204ENST00000465074 GRIN1Q05586 938 aa13.45□□□□□ -0.26
XRN1-204ENST00000465074 ADAM15Q13444 863 aa13.45□□□□□ -0.26
XRN1-204ENST00000465074 SPECC1Q5M775 1068 aa13.45□□□□□ -0.26
XRN1-204ENST00000465074 RINT1Q6NUQ1 792 aa13.45□□□□□ -0.26
XRN1-204ENST00000465074 TMEM173Q86WV6 379 aaPredicted RBP13.45□□□□□ -0.26
XRN1-204ENST00000465074 AUTS2Q8WXX7 1259 aa13.45□□□□□ -0.26
XRN1-204ENST00000465074 INTS4Q96HW7 963 aaKnown RBP13.45□□□□□ -0.26
XRN1-204ENST00000465074 ZFP42Q96MM3 310 aa13.45□□□□□ -0.26
XRN1-204ENST00000465074 NT5C3AQ9H0P0 336 aa13.45□□□□□ -0.26
XRN1-204ENST00000465074 FZD8Q9H461 694 aa13.45□□□□□ -0.26
XRN1-204ENST00000465074 KMT5AQ9NQR1 393 aa13.45□□□□□ -0.26
XRN1-204ENST00000465074 KANSL3Q9P2N6 904 aa13.45□□□□□ -0.26
XRN1-204ENST00000465074 LZTS1Q9Y250 596 aa13.45□□□□□ -0.26
XRN1-204ENST00000465074 FAN1Q9Y2M0 1017 aa13.45□□□□□ -0.26
XRN1-204ENST00000465074 PRG3Q9Y2Y8 225 aaPredicted RBP13.45□□□□□ -0.26
XRN1-204ENST00000465074 A0A1B0GUA9 196 aa13.44□□□□□ -0.26
XRN1-204ENST00000465074 N4BP3O15049 544 aa13.44□□□□□ -0.26
XRN1-204ENST00000465074 B4GALT3O60512 393 aa13.44□□□□□ -0.26
XRN1-204ENST00000465074 TBX10O75333 385 aa13.44□□□□□ -0.26
XRN1-204ENST00000465074 BMP15O95972 392 aa13.44□□□□□ -0.26
XRN1-204ENST00000465074 KRT18P05783 430 aaKnown RBP13.44□□□□□ -0.26
XRN1-204ENST00000465074 PLA2G4BP0C869 781 aa13.44□□□□□ -0.26
XRN1-204ENST00000465074 SSTR3P32745 418 aaPredicted RBP13.44□□□□□ -0.26
XRN1-204ENST00000465074 LTBRP36941 435 aa13.44□□□□□ -0.26
XRN1-204ENST00000465074 EFNA5P52803 228 aa13.44□□□□□ -0.26
XRN1-204ENST00000465074 RESTQ13127 1097 aa13.44□□□□□ -0.26
XRN1-204ENST00000465074 SMC1AQ14683 1233 aaKnown RBP13.44□□□□□ -0.26
XRN1-204ENST00000465074 BMS1Q14692 1282 aaKnown RBP13.44□□□□□ -0.26
XRN1-204ENST00000465074 FOXD4L6Q3SYB3 417 aaPredicted RBP13.44□□□□□ -0.26
XRN1-204ENST00000465074 CDCA2Q69YH5 1023 aaPredicted RBP13.44□□□□□ -0.26
XRN1-204ENST00000465074 PDE12Q6L8Q7 609 aaKnown RBP13.44□□□□□ -0.26
XRN1-204ENST00000465074 FOXD4L3Q6VB84 417 aaPredicted RBP13.44□□□□□ -0.26
XRN1-204ENST00000465074 VPS52Q8N1B4 723 aa13.44□□□□□ -0.26
XRN1-204ENST00000465074 EFHBQ8N7U6 833 aa13.44□□□□□ -0.26
XRN1-204ENST00000465074 PRIMPOLQ96LW4 560 aa13.44□□□□□ -0.26
XRN1-204ENST00000465074 AK8Q96MA6 479 aa13.44□□□□□ -0.26
XRN1-204ENST00000465074 DRC1Q96MC2 740 aa13.44□□□□□ -0.26
XRN1-204ENST00000465074 RPS6KC1Q96S38 1066 aa13.44□□□□□ -0.26
XRN1-204ENST00000465074 ADPGKQ9BRR6 497 aa13.44□□□□□ -0.26
XRN1-204ENST00000465074 APOL5Q9BWW9 433 aa13.44□□□□□ -0.26
XRN1-204ENST00000465074 PDZD7Q9H5P4 517 aa13.44□□□□□ -0.26
XRN1-204ENST00000465074 MIOSQ9NXC5 875 aa13.44□□□□□ -0.26
XRN1-204ENST00000465074 BARX2Q9UMQ3 279 aaPredicted RBP13.44□□□□□ -0.26
XRN1-204ENST00000465074 GDAQ9Y2T3 454 aa13.44□□□□□ -0.26
XRN1-204ENST00000465074 GRXCR2A6NFK2 248 aa13.43□□□□□ -0.26
XRN1-204ENST00000465074 ACKR2O00590 384 aa13.43□□□□□ -0.26
XRN1-204ENST00000465074 NRP1O14786 923 aa13.43□□□□□ -0.26
XRN1-204ENST00000465074 SLC16A4O15374 487 aa13.43□□□□□ -0.26
XRN1-204ENST00000465074 STX6O43752 255 aa13.43□□□□□ -0.26
XRN1-204ENST00000465074 EDN1P05305 212 aa13.43□□□□□ -0.26
XRN1-204ENST00000465074 LONP1P36776 959 aaKnown RBP13.43□□□□□ -0.26
XRN1-204ENST00000465074 NPTX2P47972 431 aa13.43□□□□□ -0.26
XRN1-204ENST00000465074 DMP1Q13316 513 aaPredicted RBP13.43□□□□□ -0.26
XRN1-204ENST00000465074 KARSQ15046 597 aaKnown RBP13.43□□□□□ -0.26
XRN1-204ENST00000465074 CTC1Q2NKJ3 1217 aa13.43□□□□□ -0.26
XRN1-204ENST00000465074 EEF1DP3Q658K8 133 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms