RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 ATF7IP2Q5U623 682 aa15.06■□□□□ 0
LIMD1-203ENST00000465039 MAP4K3Q8IVH8 894 aa15.06■□□□□ 0
LIMD1-203ENST00000465039 FIBCD1Q8N539 461 aa15.06■□□□□ 0
LIMD1-203ENST00000465039 FSIP1Q8NA03 581 aa15.06■□□□□ 0
LIMD1-203ENST00000465039 CHAMP1Q96JM3 812 aa15.06■□□□□ 0
LIMD1-203ENST00000465039 TGS1Q96RS0 853 aaKnown RBP15.06■□□□□ 0
LIMD1-203ENST00000465039 PLVAPQ9BX97 442 aa15.06■□□□□ 0
LIMD1-203ENST00000465039 PANK2Q9BZ23 570 aa15.06■□□□□ 0
LIMD1-203ENST00000465039 TRIM6Q9C030 488 aaPredicted RBP15.06■□□□□ 0
LIMD1-203ENST00000465039 PDZD7Q9H5P4 517 aa15.06■□□□□ 0
LIMD1-203ENST00000465039 ZNF576Q9H609 170 aa15.06■□□□□ 0
LIMD1-203ENST00000465039 PTPRHQ9HD43 1115 aa15.06■□□□□ 0
LIMD1-203ENST00000465039 KANSL3Q9P2N6 904 aa15.06■□□□□ 0
LIMD1-203ENST00000465039 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.06■□□□□ 0
LIMD1-203ENST00000465039 CHD7Q9P2D1 2997 aa15.06■□□□□ 0
LIMD1-203ENST00000465039 TRANK1O15050 2925 aa15.05■□□□□ 0
LIMD1-203ENST00000465039 A0A1B0GVL5 298 aa15.05■□□□□ -0
LIMD1-203ENST00000465039 SFI1A8K8P3 1242 aa15.05■□□□□ -0
LIMD1-203ENST00000465039 C5orf67F2Z3F1 127 aa15.05■□□□□ -0
LIMD1-203ENST00000465039 PPP1R37O75864 691 aa15.05■□□□□ -0
LIMD1-203ENST00000465039 RB1P06400 928 aa15.05■□□□□ -0
LIMD1-203ENST00000465039 MCF2P10911 925 aa15.05■□□□□ -0
LIMD1-203ENST00000465039 NDUFA8P51970 172 aa15.05■□□□□ -0
LIMD1-203ENST00000465039 FAM160A1Q05DH4 1040 aa15.05■□□□□ -0
LIMD1-203ENST00000465039 UNC13DQ70J99 1090 aa15.05■□□□□ -0
LIMD1-203ENST00000465039 DYMQ7RTS9 669 aa15.05■□□□□ -0
LIMD1-203ENST00000465039 TAS1R3Q7RTX0 852 aa15.05■□□□□ -0
LIMD1-203ENST00000465039 ZNF720Q7Z2F6 126 aa15.05■□□□□ -0
LIMD1-203ENST00000465039 SFR1Q86XK3 245 aa15.05■□□□□ -0
LIMD1-203ENST00000465039 ELOA2Q8IYF1 753 aaPredicted RBP15.05■□□□□ -0
LIMD1-203ENST00000465039 TIGD1Q96MW7 591 aa15.05■□□□□ -0
LIMD1-203ENST00000465039 ACO2Q99798 780 aaKnown RBP15.05■□□□□ -0
LIMD1-203ENST00000465039 STRA6Q9BX79 667 aa15.05■□□□□ -0
LIMD1-203ENST00000465039 NKX2-4Q9H2Z4 354 aa15.05■□□□□ -0
LIMD1-203ENST00000465039 GDPD2Q9HCC8 539 aa15.05■□□□□ -0
LIMD1-203ENST00000465039 PANK4Q9NVE7 773 aa15.05■□□□□ -0
LIMD1-203ENST00000465039 TBX20Q9UMR3 447 aa15.05■□□□□ -0
LIMD1-203ENST00000465039 EXOC7Q9UPT5 735 aa15.05■□□□□ -0
LIMD1-203ENST00000465039 GIT1Q9Y2X7 761 aa15.05■□□□□ -0
LIMD1-203ENST00000465039 IPPQ9Y573 584 aa15.05■□□□□ -0
LIMD1-203ENST00000465039 PCDHB13Q9Y5F0 798 aa15.05■□□□□ -0
LIMD1-203ENST00000465039 UBE4BO95155 1302 aa15.05■□□□□ -0
LIMD1-203ENST00000465039 IDEP14735 1019 aa15.04■□□□□ -0
LIMD1-203ENST00000465039 ASIC1P78348 528 aa15.04■□□□□ -0
LIMD1-203ENST00000465039 POU5F1Q01860 360 aaKnown RBP15.04■□□□□ -0
LIMD1-203ENST00000465039 CACNB1Q02641 598 aaPredicted RBP15.04■□□□□ -0
LIMD1-203ENST00000465039 EHHADHQ08426 723 aa15.04■□□□□ -0
LIMD1-203ENST00000465039 TMEM132AQ24JP5 1023 aa15.04■□□□□ -0
LIMD1-203ENST00000465039 HERC4Q5GLZ8 1057 aaPredicted RBP15.04■□□□□ -0
LIMD1-203ENST00000465039 CLLU1OSQ5K130 101 aa15.04■□□□□ -0
LIMD1-203ENST00000465039 NT5DC1Q5TFE4 455 aa15.04■□□□□ -0
LIMD1-203ENST00000465039 FAM117BQ6P1L5 589 aa15.04■□□□□ -0
LIMD1-203ENST00000465039 MPZL3Q6UWV2 235 aa15.04■□□□□ -0
LIMD1-203ENST00000465039 TMCO2Q7Z6W1 182 aaPredicted RBP15.04■□□□□ -0
LIMD1-203ENST00000465039 FMR1NBQ8N0W7 255 aaPredicted RBP15.04■□□□□ -0
LIMD1-203ENST00000465039 SMG8Q8ND04 991 aaKnown RBP15.04■□□□□ -0
LIMD1-203ENST00000465039 P2RX5Q93086 422 aa15.04■□□□□ -0
LIMD1-203ENST00000465039 TTYH1Q9H313 450 aaPredicted RBP15.04■□□□□ -0
LIMD1-203ENST00000465039 SEMA6BQ9H3T3 888 aa15.04■□□□□ -0
LIMD1-203ENST00000465039 ZHX3Q9H4I2 956 aa15.04■□□□□ -0
LIMD1-203ENST00000465039 MRPL44Q9H9J2 332 aaKnown RBP15.04■□□□□ -0
LIMD1-203ENST00000465039 RSAD1Q9HA92 442 aa15.04■□□□□ -0
LIMD1-203ENST00000465039 AAASQ9NRG9 546 aa15.04■□□□□ -0
LIMD1-203ENST00000465039 RNF19AQ9NV58 838 aa15.04■□□□□ -0
LIMD1-203ENST00000465039 SZT2Q5T011 3432 aa15.04■□□□□ -0
LIMD1-203ENST00000465039 LCHNA4D1U4 455 aa15.03■□□□□ -0
LIMD1-203ENST00000465039 ABLIM1O14639 778 aa15.03■□□□□ -0
LIMD1-203ENST00000465039 HNRNPDLO14979 420 aaKnown RBP15.03■□□□□ -0
LIMD1-203ENST00000465039 EIF3DO15371 548 aaKnown RBP eCLIP15.03■□□□□ -0
LIMD1-203ENST00000465039 GTPBP6O43824 516 aaPredicted RBP15.03■□□□□ -0
LIMD1-203ENST00000465039 ZNF202O95125 648 aa15.03■□□□□ -0
LIMD1-203ENST00000465039 LINC00271P0C7V0 271 aa15.03■□□□□ -0
LIMD1-203ENST00000465039 ITGA4P13612 1032 aa15.03■□□□□ -0
LIMD1-203ENST00000465039 LAG3P18627 525 aa15.03■□□□□ -0
LIMD1-203ENST00000465039 POU3F3P20264 500 aaPredicted RBP15.03■□□□□ -0
LIMD1-203ENST00000465039 PPM1AP35813 382 aa15.03■□□□□ -0
LIMD1-203ENST00000465039 ZNF568Q3ZCX4 644 aa15.03■□□□□ -0
LIMD1-203ENST00000465039 LONRF3Q496Y0 759 aa15.03■□□□□ -0
LIMD1-203ENST00000465039 KRBA2Q6ZNG9 492 aa15.03■□□□□ -0
LIMD1-203ENST00000465039 DEFB123Q8N688 67 aa15.03■□□□□ -0
LIMD1-203ENST00000465039 URGCPQ8TCY9 931 aa15.03■□□□□ -0
LIMD1-203ENST00000465039 PAGE5Q96GU1 130 aa15.03■□□□□ -0
LIMD1-203ENST00000465039 CPB2Q96IY4 423 aa15.03■□□□□ -0
LIMD1-203ENST00000465039 CASD1Q96PB1 797 aa15.03■□□□□ -0
LIMD1-203ENST00000465039 C11orf84Q9BUA3 381 aaPredicted RBP15.03■□□□□ -0
LIMD1-203ENST00000465039 EIF2AQ9BY44 585 aaKnown RBP15.03■□□□□ -0
LIMD1-203ENST00000465039 GTPBP4Q9BZE4 634 aaKnown RBP15.03■□□□□ -0
LIMD1-203ENST00000465039 TMEM206Q9H813 350 aa15.03■□□□□ -0
LIMD1-203ENST00000465039 LMCD1Q9NZU5 365 aa15.03■□□□□ -0
LIMD1-203ENST00000465039 STK39Q9UEW8 545 aa15.03■□□□□ -0
LIMD1-203ENST00000465039 HOOK1Q9UJC3 728 aaKnown RBP15.03■□□□□ -0
LIMD1-203ENST00000465039 NLRC5Q86WI3 1866 aa15.03■□□□□ -0
LIMD1-203ENST00000465039 CLDN3O15551 220 aa15.02■□□□□ -0
LIMD1-203ENST00000465039 FGFR1P11362 822 aa15.02■□□□□ -0
LIMD1-203ENST00000465039 MYOGP15173 224 aa15.02■□□□□ -0
LIMD1-203ENST00000465039 GRM5P41594 1212 aa15.02■□□□□ -0
LIMD1-203ENST00000465039 UBE2HP62256 183 aa15.02■□□□□ -0
LIMD1-203ENST00000465039 SNRPFP62306 86 aaKnown RBP15.02■□□□□ -0
LIMD1-203ENST00000465039 MCL1Q07820 350 aa15.02■□□□□ -0
LIMD1-203ENST00000465039 COASYQ13057 564 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms