RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 OXSMQ9NWU1 459 aa6.32□□□□□ -1.4
UBR4-209ENST00000465036 CARMIL1Q5VZK9 1371 aa6.31□□□□□ -1.4
UBR4-209ENST00000465036 MYPNQ86TC9 1320 aa6.31□□□□□ -1.4
UBR4-209ENST00000465036 GAGE12BA1L429 117 aa6.31□□□□□ -1.4
UBR4-209ENST00000465036 GAGE12HA6NDE8 117 aa6.31□□□□□ -1.4
UBR4-209ENST00000465036 TMEM200CA6NKL6 621 aa6.31□□□□□ -1.4
UBR4-209ENST00000465036 ZAR1LA6NP61 321 aa6.31□□□□□ -1.4
UBR4-209ENST00000465036 AHRRA9YTQ3 701 aa6.31□□□□□ -1.4
UBR4-209ENST00000465036 JMJD7P0C870 316 aa6.31□□□□□ -1.4
UBR4-209ENST00000465036 CD40P25942 277 aa6.31□□□□□ -1.4
UBR4-209ENST00000465036 GPR15P49685 360 aa6.31□□□□□ -1.4
UBR4-209ENST00000465036 CCDC178Q5BJE1 867 aa6.31□□□□□ -1.4
UBR4-209ENST00000465036 HECTD2Q5U5R9 776 aa6.31□□□□□ -1.4
UBR4-209ENST00000465036 RTF1Q92541 710 aaKnown RBP6.31□□□□□ -1.4
UBR4-209ENST00000465036 FAM193BQ96PV7 902 aaPredicted RBP6.31□□□□□ -1.4
UBR4-209ENST00000465036 ZMAT4Q9H898 229 aa6.31□□□□□ -1.4
UBR4-209ENST00000465036 ZNHIT2Q9UHR6 403 aa6.31□□□□□ -1.4
UBR4-209ENST00000465036 PCDHB6Q9Y5E3 794 aa6.31□□□□□ -1.4
UBR4-209ENST00000465036 SEC24DO94855 1032 aaPredicted RBP6.3□□□□□ -1.4
UBR4-209ENST00000465036 APOL3O95236 402 aa6.3□□□□□ -1.4
UBR4-209ENST00000465036 SQSTM1Q13501 440 aa6.3□□□□□ -1.4
UBR4-209ENST00000465036 NFE2L2Q16236 605 aa6.3□□□□□ -1.4
UBR4-209ENST00000465036 FAM214AQ32MH5 1076 aa6.3□□□□□ -1.4
UBR4-209ENST00000465036 CFAP100Q494V2 611 aa6.3□□□□□ -1.4
UBR4-209ENST00000465036 LRCH2Q5VUJ6 765 aa6.3□□□□□ -1.4
UBR4-209ENST00000465036 TAS1R1Q7RTX1 841 aa6.3□□□□□ -1.4
UBR4-209ENST00000465036 GPRIN1Q7Z2K8 1008 aa6.3□□□□□ -1.4
UBR4-209ENST00000465036 EFHBQ8N7U6 833 aa6.3□□□□□ -1.4
UBR4-209ENST00000465036 CDYL2Q8N8U2 506 aa6.3□□□□□ -1.4
UBR4-209ENST00000465036 IL17RAQ96F46 866 aa6.3□□□□□ -1.4
UBR4-209ENST00000465036 CPEB1Q9BZB8 566 aaKnown RBP6.3□□□□□ -1.4
UBR4-209ENST00000465036 CYP4F11Q9HBI6 524 aa6.3□□□□□ -1.4
UBR4-209ENST00000465036 TOMM22Q9NS69 142 aa6.3□□□□□ -1.4
UBR4-209ENST00000465036 MAGEC2Q9UBF1 373 aaPredicted RBP6.3□□□□□ -1.4
UBR4-209ENST00000465036 DKK2Q9UBU2 259 aa6.3□□□□□ -1.4
UBR4-209ENST00000465036 SHROOM2Q13796 1616 aa6.29□□□□□ -1.4
UBR4-209ENST00000465036 CENPVL1A0A0U1RR11 272 aa6.29□□□□□ -1.4
UBR4-209ENST00000465036 IGSF3O75054 1194 aa6.29□□□□□ -1.4
UBR4-209ENST00000465036 LY86O95711 162 aa6.29□□□□□ -1.4
UBR4-209ENST00000465036 ATP2A2P16615 1042 aaKnown RBP6.29□□□□□ -1.4
UBR4-209ENST00000465036 SDSP20132 328 aa6.29□□□□□ -1.4
UBR4-209ENST00000465036 CD69Q07108 199 aa6.29□□□□□ -1.4
UBR4-209ENST00000465036 SF3A1Q15459 793 aaKnown RBP6.29□□□□□ -1.4
UBR4-209ENST00000465036 GPR158Q5T848 1215 aa6.29□□□□□ -1.4
UBR4-209ENST00000465036 OLFML1Q6UWY5 402 aa6.29□□□□□ -1.4
UBR4-209ENST00000465036 ARHGEF19Q8IW93 802 aa6.29□□□□□ -1.4
UBR4-209ENST00000465036 SYNPOQ8N3V7 929 aa6.29□□□□□ -1.4
UBR4-209ENST00000465036 OR5M3Q8NGP4 307 aa6.29□□□□□ -1.4
UBR4-209ENST00000465036 NTN5Q8WTR8 489 aaPredicted RBP6.29□□□□□ -1.4
UBR4-209ENST00000465036 LSM14BQ9BX40 385 aaKnown RBP6.29□□□□□ -1.4
UBR4-209ENST00000465036 OSBPL2Q9H1P3 480 aa6.29□□□□□ -1.4
UBR4-209ENST00000465036 SYNPO2LQ9H987 977 aa6.29□□□□□ -1.4
UBR4-209ENST00000465036 PTGFRNQ9P2B2 879 aa6.29□□□□□ -1.4
UBR4-209ENST00000465036 EIF2B4Q9UI10 523 aaKnown RBP6.29□□□□□ -1.4
UBR4-209ENST00000465036 ZKSCAN5Q9Y2L8 839 aa6.29□□□□□ -1.4
UBR4-209ENST00000465036 CUL7Q14999 1698 aa6.29□□□□□ -1.4
UBR4-209ENST00000465036 PRG4Q92954 1404 aaPredicted RBP6.28□□□□□ -1.4
UBR4-209ENST00000465036 DIRC3C9JPN6 131 aa6.28□□□□□ -1.4
UBR4-209ENST00000465036 ELL2O00472 640 aaPredicted RBP6.28□□□□□ -1.4
UBR4-209ENST00000465036 RNASET2O00584 256 aaKnown RBP6.28□□□□□ -1.4
UBR4-209ENST00000465036 F2P00734 622 aa6.28□□□□□ -1.4
UBR4-209ENST00000465036 POU3F2P20265 443 aaPredicted RBP6.28□□□□□ -1.4
UBR4-209ENST00000465036 BMPR1AP36894 532 aa6.28□□□□□ -1.4
UBR4-209ENST00000465036 ZEB1P37275 1124 aaPredicted RBP6.28□□□□□ -1.4
UBR4-209ENST00000465036 GZMKP49863 264 aa6.28□□□□□ -1.4
UBR4-209ENST00000465036 DRICH1Q6PGQ1 229 aaPredicted RBP6.28□□□□□ -1.4
UBR4-209ENST00000465036 SYCE2Q6PIF2 218 aa6.28□□□□□ -1.4
UBR4-209ENST00000465036 Q6YL49 198 aa6.28□□□□□ -1.4
UBR4-209ENST00000465036 ESPNLQ6ZVH7 1005 aa6.28□□□□□ -1.4
UBR4-209ENST00000465036 PASD1Q8IV76 773 aa6.28□□□□□ -1.4
UBR4-209ENST00000465036 LILRA3Q8N6C8 439 aaPredicted RBP6.28□□□□□ -1.4
UBR4-209ENST00000465036 COQ10AQ96MF6 247 aa6.28□□□□□ -1.4
UBR4-209ENST00000465036 SERHL2Q9H4I8 314 aa6.28□□□□□ -1.4
UBR4-209ENST00000465036 ZNF768Q9H5H4 540 aaKnown RBP6.28□□□□□ -1.4
UBR4-209ENST00000465036 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.28□□□□□ -1.4
UBR4-209ENST00000465036 CDK11AQ9UQ88 783 aaPredicted RBP6.28□□□□□ -1.4
UBR4-209ENST00000465036 CHST2Q9Y4C5 530 aa6.28□□□□□ -1.4
UBR4-209ENST00000465036 KIAA0586Q9BVV6 1533 aa6.27□□□□□ -1.41
UBR4-209ENST00000465036 NRP2O60462 931 aa6.27□□□□□ -1.41
UBR4-209ENST00000465036 PCDH8O95206 1070 aa6.27□□□□□ -1.41
UBR4-209ENST00000465036 CFBP00751 764 aa6.27□□□□□ -1.41
UBR4-209ENST00000465036 PFKMP08237 780 aa6.27□□□□□ -1.41
UBR4-209ENST00000465036 CASRP41180 1078 aa6.27□□□□□ -1.41
UBR4-209ENST00000465036 MRPS21P82921 87 aaKnown RBP6.27□□□□□ -1.41
UBR4-209ENST00000465036 STRIP1Q5VSL9 837 aa6.27□□□□□ -1.41
UBR4-209ENST00000465036 GDF7Q7Z4P5 450 aa6.27□□□□□ -1.41
UBR4-209ENST00000465036 ADGRG3Q86Y34 549 aa6.27□□□□□ -1.41
UBR4-209ENST00000465036 BEND2Q8NDZ0 799 aa6.27□□□□□ -1.41
UBR4-209ENST00000465036 PMFBP1Q8TBY8 1022 aa6.27□□□□□ -1.41
UBR4-209ENST00000465036 BBC3Q96PG8 261 aaPredicted RBP6.27□□□□□ -1.41
UBR4-209ENST00000465036 EPC1Q9H2F5 836 aa6.27□□□□□ -1.41
UBR4-209ENST00000465036 IFT57Q9NWB7 429 aa6.27□□□□□ -1.41
UBR4-209ENST00000465036 SYBUQ9NX95 663 aa6.27□□□□□ -1.41
UBR4-209ENST00000465036 HDAC5Q9UQL6 1122 aa6.27□□□□□ -1.41
UBR4-209ENST00000465036 A0A1W2PR48 441 aa6.26□□□□□ -1.41
UBR4-209ENST00000465036 USP14P54578 494 aa6.26□□□□□ -1.41
UBR4-209ENST00000465036 DSG1Q02413 1049 aa6.26□□□□□ -1.41
UBR4-209ENST00000465036 RSAD2Q8WXG1 361 aa6.26□□□□□ -1.41
UBR4-209ENST00000465036 FDXACB1Q9BRP7 624 aaPredicted RBP6.26□□□□□ -1.41
UBR4-209ENST00000465036 WNT8AQ9H1J5 351 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms