RNA–Protein interactions for RNA: ENST00000465030.1

SNX12-203, Transcript of sorting nexin 12, humanhuman

TSL 2

Gene SNX12, Length 946 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-203ENST00000465030 CACNA2D4Q7Z3S7 1137 aa17.46■□□□□ 0.39
SNX12-203ENST00000465030 WDR5BQ86VZ2 330 aa17.46■□□□□ 0.39
SNX12-203ENST00000465030 CCDC60Q8IWA6 550 aaPredicted RBP17.46■□□□□ 0.39
SNX12-203ENST00000465030 URGCPQ8TCY9 931 aa17.46■□□□□ 0.39
SNX12-203ENST00000465030 FAM3CQ92520 227 aa17.46■□□□□ 0.39
SNX12-203ENST00000465030 ZSWIM5Q9P217 1185 aa17.46■□□□□ 0.39
SNX12-203ENST00000465030 KLK13Q9UKR3 277 aa17.46■□□□□ 0.39
SNX12-203ENST00000465030 DDX19BQ9UMR2 479 aa17.46■□□□□ 0.39
SNX12-203ENST00000465030 MTCL1Q9Y4B5 1905 aaKnown RBP17.45■□□□□ 0.38
SNX12-203ENST00000465030 ZNF462Q96JM2 2506 aa17.45■□□□□ 0.38
SNX12-203ENST00000465030 A0A0D9SFI3 127 aa17.45■□□□□ 0.38
SNX12-203ENST00000465030 CAPNS1P04632 268 aa17.45■□□□□ 0.38
SNX12-203ENST00000465030 CHRNB1P11230 501 aa17.45■□□□□ 0.38
SNX12-203ENST00000465030 ATP4AP20648 1035 aa17.45■□□□□ 0.38
SNX12-203ENST00000465030 CSRP1P21291 193 aaKnown RBP17.45■□□□□ 0.38
SNX12-203ENST00000465030 GPC3P51654 580 aa17.45■□□□□ 0.38
SNX12-203ENST00000465030 MCMDC2Q4G0Z9 681 aa17.45■□□□□ 0.38
SNX12-203ENST00000465030 TWF2Q6IBS0 349 aaKnown RBP17.45■□□□□ 0.38
SNX12-203ENST00000465030 ZNF589Q86UQ0 364 aaPredicted RBP17.45■□□□□ 0.38
SNX12-203ENST00000465030 LINC01465Q8N7H1 131 aa17.45■□□□□ 0.38
SNX12-203ENST00000465030 FAM227BQ96M60 508 aa17.45■□□□□ 0.38
SNX12-203ENST00000465030 FAM193BQ96PV7 902 aaPredicted RBP17.45■□□□□ 0.38
SNX12-203ENST00000465030 UBAC1Q9BSL1 405 aa17.45■□□□□ 0.38
SNX12-203ENST00000465030 PRG3Q9Y2Y8 225 aaPredicted RBP17.45■□□□□ 0.38
SNX12-203ENST00000465030 SPAG17Q6Q759 2223 aa17.45■□□□□ 0.38
SNX12-203ENST00000465030 ZNF213O14771 459 aa17.44■□□□□ 0.38
SNX12-203ENST00000465030 HNRNPA1P09651 372 aaKnown RBP eCLIP17.44■□□□□ 0.38
SNX12-203ENST00000465030 HOXA6P31267 233 aa17.44■□□□□ 0.38
SNX12-203ENST00000465030 ITGB3BPQ13352 177 aaPredicted RBP17.44■□□□□ 0.38
SNX12-203ENST00000465030 GRM4Q14833 912 aa17.44■□□□□ 0.38
SNX12-203ENST00000465030 ABHD15Q6UXT9 468 aa17.44■□□□□ 0.38
SNX12-203ENST00000465030 KBTBD6Q86V97 674 aa17.44■□□□□ 0.38
SNX12-203ENST00000465030 GLYCTKQ8IVS8 523 aa17.44■□□□□ 0.38
SNX12-203ENST00000465030 PIBF1Q8WXW3 757 aa17.44■□□□□ 0.38
SNX12-203ENST00000465030 MBOAT7Q96N66 472 aa17.44■□□□□ 0.38
SNX12-203ENST00000465030 SCLT1Q96NL6 688 aa17.44■□□□□ 0.38
SNX12-203ENST00000465030 ZNF302Q9NR11 478 aa17.44■□□□□ 0.38
SNX12-203ENST00000465030 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.44■□□□□ 0.38
SNX12-203ENST00000465030 FAM105AQ9NUU6 356 aa17.44■□□□□ 0.38
SNX12-203ENST00000465030 DACH1Q9UI36 760 aa17.44■□□□□ 0.38
SNX12-203ENST00000465030 SPTA1P02549 2419 aa17.44■□□□□ 0.38
SNX12-203ENST00000465030 ASXL3Q9C0F0 2248 aa17.43■□□□□ 0.38
SNX12-203ENST00000465030 ZNF623O75123 536 aa17.43■□□□□ 0.38
SNX12-203ENST00000465030 CCNE2O96020 404 aa17.43■□□□□ 0.38
SNX12-203ENST00000465030 TMOD1P28289 359 aa17.43■□□□□ 0.38
SNX12-203ENST00000465030 AFF1P51825 1210 aaKnown RBP17.43■□□□□ 0.38
SNX12-203ENST00000465030 C19orf57Q0VDD7 668 aa17.43■□□□□ 0.38
SNX12-203ENST00000465030 PTGDRQ13258 359 aa17.43■□□□□ 0.38
SNX12-203ENST00000465030 EFCAB12Q6NXP0 572 aa17.43■□□□□ 0.38
SNX12-203ENST00000465030 LRRC71Q8N4P6 559 aa17.43■□□□□ 0.38
SNX12-203ENST00000465030 GAB3Q8WWW8 586 aa17.43■□□□□ 0.38
SNX12-203ENST00000465030 CHST7Q9NS84 486 aa17.43■□□□□ 0.38
SNX12-203ENST00000465030 FNIP2Q9P278 1114 aa17.43■□□□□ 0.38
SNX12-203ENST00000465030 FBXW11Q9UKB1 542 aa17.43■□□□□ 0.38
SNX12-203ENST00000465030 MAGEB2O15479 319 aa17.42■□□□□ 0.38
SNX12-203ENST00000465030 CSDE1O75534 798 aaKnown RBP17.42■□□□□ 0.38
SNX12-203ENST00000465030 RAB27AP51159 221 aa17.42■□□□□ 0.38
SNX12-203ENST00000465030 CKAP2LQ8IYA6 745 aa17.42■□□□□ 0.38
SNX12-203ENST00000465030 B3GALT6Q96L58 329 aa17.42■□□□□ 0.38
SNX12-203ENST00000465030 BRD9Q9H8M2 597 aa17.42■□□□□ 0.38
SNX12-203ENST00000465030 KCNH3Q9ULD8 1083 aa17.42■□□□□ 0.38
SNX12-203ENST00000465030 PIAS3Q9Y6X2 628 aa17.42■□□□□ 0.38
SNX12-203ENST00000465030 ACACAQ13085 2346 aa17.42■□□□□ 0.38
SNX12-203ENST00000465030 CCL16O15467 120 aa17.41■□□□□ 0.38
SNX12-203ENST00000465030 XYLBO75191 536 aa17.41■□□□□ 0.38
SNX12-203ENST00000465030 RPP40O75818 363 aaKnown RBP17.41■□□□□ 0.38
SNX12-203ENST00000465030 RPL17P18621 184 aaKnown RBP17.41■□□□□ 0.38
SNX12-203ENST00000465030 HOXA9P31269 272 aa17.41■□□□□ 0.38
SNX12-203ENST00000465030 HOXC13P31276 330 aa17.41■□□□□ 0.38
SNX12-203ENST00000465030 SEC23AQ15436 765 aa17.41■□□□□ 0.38
SNX12-203ENST00000465030 LIN9Q5TKA1 542 aa17.41■□□□□ 0.38
SNX12-203ENST00000465030 TANGO2Q6ICL3 276 aa17.41■□□□□ 0.38
SNX12-203ENST00000465030 AGMOQ6ZNB7 445 aa17.41■□□□□ 0.38
SNX12-203ENST00000465030 OTUD7AQ8TE49 926 aaPredicted RBP17.41■□□□□ 0.38
SNX12-203ENST00000465030 NLRP7Q8WX94 980 aa17.41■□□□□ 0.38
SNX12-203ENST00000465030 ING5Q8WYH8 240 aa17.41■□□□□ 0.38
SNX12-203ENST00000465030 ELSPBP1Q96BH3 223 aa17.41■□□□□ 0.38
SNX12-203ENST00000465030 PGBD4Q96DM1 585 aa17.41■□□□□ 0.38
SNX12-203ENST00000465030 MXRA8Q9BRK3 442 aa17.41■□□□□ 0.38
SNX12-203ENST00000465030 AGO4Q9HCK5 861 aaKnown RBP17.41■□□□□ 0.38
SNX12-203ENST00000465030 C2orf42Q9NWW7 574 aa17.41■□□□□ 0.38
SNX12-203ENST00000465030 KANSL3Q9P2N6 904 aa17.41■□□□□ 0.38
SNX12-203ENST00000465030 POLIQ9UNA4 740 aa17.41■□□□□ 0.38
SNX12-203ENST00000465030 CEP131Q9UPN4 1083 aa17.41■□□□□ 0.38
SNX12-203ENST00000465030 PIN4Q9Y237 131 aaKnown RBP17.41■□□□□ 0.38
SNX12-203ENST00000465030 APC2O95996 2303 aa17.41■□□□□ 0.38
SNX12-203ENST00000465030 CACNA1EQ15878 2313 aa17.4■□□□□ 0.38
SNX12-203ENST00000465030 SEC24BO95487 1268 aa17.4■□□□□ 0.38
SNX12-203ENST00000465030 POMCP01189 267 aa17.4■□□□□ 0.38
SNX12-203ENST00000465030 CREMQ03060 361 aa17.4■□□□□ 0.38
SNX12-203ENST00000465030 LRRC32Q14392 662 aa17.4■□□□□ 0.38
SNX12-203ENST00000465030 GRM2Q14416 872 aa17.4■□□□□ 0.38
SNX12-203ENST00000465030 PPM1LQ5SGD2 360 aa17.4■□□□□ 0.38
SNX12-203ENST00000465030 SWSAP1Q6NVH7 229 aa17.4■□□□□ 0.38
SNX12-203ENST00000465030 Q6ZS52 159 aa17.4■□□□□ 0.38
SNX12-203ENST00000465030 TRMT1LQ7Z2T5 733 aaKnown RBP17.4■□□□□ 0.38
SNX12-203ENST00000465030 GPR65Q8IYL9 337 aa17.4■□□□□ 0.38
SNX12-203ENST00000465030 GDE1Q9NZC3 331 aa17.4■□□□□ 0.38
SNX12-203ENST00000465030 USP9XQ93008 2570 aaPredicted RBP17.39■□□□□ 0.38
SNX12-203ENST00000465030 COL4A2P08572 1712 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms