RNA–Protein interactions for RNA: ENST00000464812.1

NUDCD3-204, Transcript of NudC domain containing 3, humanhuman

TSL 5

Gene NUDCD3, Length 811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-204ENST00000464812 PIGRP01833 764 aa9.84□□□□□ -0.83
NUDCD3-204ENST00000464812 ERCC5P28715 1186 aaPredicted RBP9.84□□□□□ -0.83
NUDCD3-204ENST00000464812 ADSSP30520 456 aa9.84□□□□□ -0.83
NUDCD3-204ENST00000464812 ZNF165P49910 485 aa9.84□□□□□ -0.83
NUDCD3-204ENST00000464812 CCL23P55773 120 aa9.84□□□□□ -0.83
NUDCD3-204ENST00000464812 ALCAMQ13740 583 aa9.84□□□□□ -0.83
NUDCD3-204ENST00000464812 FAM26DQ5JW98 314 aa9.84□□□□□ -0.83
NUDCD3-204ENST00000464812 TMEM240Q5SV17 173 aa9.84□□□□□ -0.83
NUDCD3-204ENST00000464812 EEF1DP3Q658K8 133 aa9.84□□□□□ -0.83
NUDCD3-204ENST00000464812 MFSD5Q6N075 450 aa9.84□□□□□ -0.83
NUDCD3-204ENST00000464812 FAM228AQ86W67 206 aa9.84□□□□□ -0.83
NUDCD3-204ENST00000464812 CDR2LQ86X02 465 aaPredicted RBP9.84□□□□□ -0.83
NUDCD3-204ENST00000464812 ZBTB8OSQ8IWT0 167 aa9.84□□□□□ -0.83
NUDCD3-204ENST00000464812 ZC3H3Q8IXZ2 948 aaKnown RBP9.84□□□□□ -0.83
NUDCD3-204ENST00000464812 FAM200AQ8TCP9 573 aa9.84□□□□□ -0.83
NUDCD3-204ENST00000464812 CPB2Q96IY4 423 aa9.84□□□□□ -0.83
NUDCD3-204ENST00000464812 SCLT1Q96NL6 688 aa9.84□□□□□ -0.83
NUDCD3-204ENST00000464812 ACCSQ96QU6 501 aa9.84□□□□□ -0.83
NUDCD3-204ENST00000464812 CBWD1Q9BRT8 395 aa9.84□□□□□ -0.83
NUDCD3-204ENST00000464812 TARS2Q9BW92 718 aaKnown RBP9.84□□□□□ -0.83
NUDCD3-204ENST00000464812 CELF4Q9BZC1 486 aaKnown RBP9.84□□□□□ -0.83
NUDCD3-204ENST00000464812 INO80BQ9C086 356 aaPredicted RBP9.84□□□□□ -0.83
NUDCD3-204ENST00000464812 AGPAT3Q9NRZ7 376 aa9.84□□□□□ -0.83
NUDCD3-204ENST00000464812 TYW1Q9NV66 732 aaKnown RBP9.84□□□□□ -0.83
NUDCD3-204ENST00000464812 CXXC1Q9P0U4 656 aaPredicted RBP9.84□□□□□ -0.83
NUDCD3-204ENST00000464812 DACH1Q9UI36 760 aa9.84□□□□□ -0.83
NUDCD3-204ENST00000464812 NOC2LQ9Y3T9 749 aaKnown RBP9.84□□□□□ -0.83
NUDCD3-204ENST00000464812 PCDHB13Q9Y5F0 798 aa9.84□□□□□ -0.83
NUDCD3-204ENST00000464812 MROH7Q68CQ1 1323 aa9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 DCDC2CA8MYV0 355 aa9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 H0YCG3 227 aa9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 K7ERI5 159 aa9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 HNRNPDLO14979 420 aaKnown RBP9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 CLIC2O15247 247 aa9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 FAM189A1O60320 539 aa9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 CAND2O75155 1236 aa9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 GHRP10912 638 aa9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 ARF4P18085 180 aaPredicted RBP9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 PROZP22891 400 aa9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 EFNA5P52803 228 aa9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 CRYBB1P53674 252 aaPredicted RBP9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 MYL5Q02045 173 aa9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 STIM1Q13586 685 aa9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 LPIN1Q14693 890 aa9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 MAPK6Q16659 721 aa9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 FAM187BQ17R55 369 aa9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 HSP90AA4PQ58FG1 418 aa9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 FBXO47Q5MNV8 452 aa9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 ZBTB41Q5SVQ8 909 aa9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 STXBP4Q6ZWJ1 553 aa9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 SRGAP1Q7Z6B7 1085 aa9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 NME8Q8N427 588 aa9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 SLC17A8Q8NDX2 589 aa9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 ZBTB45Q96K62 511 aaPredicted RBP9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 ACO2Q99798 780 aaKnown RBP9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 SEZ6LQ9BYH1 1024 aa9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 GCOM2Q9BZD3 368 aaPredicted RBP9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 GTPBP4Q9BZE4 634 aaKnown RBP9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 GBP3Q9H0R5 595 aa9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 C2orf40Q9H1Z8 148 aa9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 PDZD7Q9H5P4 517 aa9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 AGO3Q9H9G7 860 aaKnown RBP9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 SAMSN1Q9NSI8 373 aaKnown RBP9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 PRMT7Q9NVM4 692 aaPredicted RBP9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 TRAF3IP3Q9Y228 551 aa9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 NFE2L3Q9Y4A8 694 aa9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 COL4A6Q14031 1691 aa9.83□□□□□ -0.84
NUDCD3-204ENST00000464812 FSD2A1L4K1 749 aa9.82□□□□□ -0.84
NUDCD3-204ENST00000464812 GRXCR1A8MXD5 290 aa9.82□□□□□ -0.84
NUDCD3-204ENST00000464812 ACKR2O00590 384 aa9.82□□□□□ -0.84
NUDCD3-204ENST00000464812 PDXKO00764 312 aa9.82□□□□□ -0.84
NUDCD3-204ENST00000464812 TLR3O15455 904 aaKnown RBP9.82□□□□□ -0.84
NUDCD3-204ENST00000464812 MGEA5O60502 916 aa9.82□□□□□ -0.84
NUDCD3-204ENST00000464812 NBNO60934 754 aa9.82□□□□□ -0.84
NUDCD3-204ENST00000464812 NR3C1P04150 777 aa9.82□□□□□ -0.84
NUDCD3-204ENST00000464812 ADRB2P07550 413 aa9.82□□□□□ -0.84
NUDCD3-204ENST00000464812 ATP1A3P13637 1013 aa9.82□□□□□ -0.84
NUDCD3-204ENST00000464812 RAG1P15918 1043 aa9.82□□□□□ -0.84
NUDCD3-204ENST00000464812 EIF4BP23588 611 aaKnown RBP9.82□□□□□ -0.84
NUDCD3-204ENST00000464812 NR2F2P24468 414 aa9.82□□□□□ -0.84
NUDCD3-204ENST00000464812 HOXA11P31270 313 aaPredicted RBP9.82□□□□□ -0.84
NUDCD3-204ENST00000464812 CD52P31358 61 aa9.82□□□□□ -0.84
NUDCD3-204ENST00000464812 PPP1R2P41236 205 aa9.82□□□□□ -0.84
NUDCD3-204ENST00000464812 CASP4P49662 377 aa9.82□□□□□ -0.84
NUDCD3-204ENST00000464812 CYP2J2P51589 502 aa9.82□□□□□ -0.84
NUDCD3-204ENST00000464812 LRRC63Q05C16 580 aa9.82□□□□□ -0.84
NUDCD3-204ENST00000464812 STRN3Q13033 797 aa9.82□□□□□ -0.84
NUDCD3-204ENST00000464812 PRPF4BQ13523 1007 aaKnown RBP9.82□□□□□ -0.84
NUDCD3-204ENST00000464812 NFIL3Q16649 462 aa9.82□□□□□ -0.84
NUDCD3-204ENST00000464812 CT47A1Q5JQC4 288 aaPredicted RBP9.82□□□□□ -0.84
NUDCD3-204ENST00000464812 CDKAL1Q5VV42 579 aa9.82□□□□□ -0.84
NUDCD3-204ENST00000464812 LRRC8DQ7L1W4 858 aa9.82□□□□□ -0.84
NUDCD3-204ENST00000464812 RSPH3Q86UC2 560 aa9.82□□□□□ -0.84
NUDCD3-204ENST00000464812 IRF2BP1Q8IU81 584 aa9.82□□□□□ -0.84
NUDCD3-204ENST00000464812 TDHQ8IZJ6 230 aa9.82□□□□□ -0.84
NUDCD3-204ENST00000464812 CEP120Q8N960 986 aa9.82□□□□□ -0.84
NUDCD3-204ENST00000464812 CAGE1Q8TC20 777 aa9.82□□□□□ -0.84
NUDCD3-204ENST00000464812 ENOX1Q8TC92 643 aaKnown RBP9.82□□□□□ -0.84
NUDCD3-204ENST00000464812 SAAL1Q96ER3 474 aa9.82□□□□□ -0.84
NUDCD3-204ENST00000464812 BICD1Q96G01 975 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms