RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 IFT122Q9HBG6 1241 aa6.16□□□□□ -1.42
USP25-207ENST00000464435 EVLQ9UI08 416 aaPredicted RBP6.16□□□□□ -1.42
USP25-207ENST00000464435 PRSS50Q9UI38 385 aa6.16□□□□□ -1.42
USP25-207ENST00000464435 MAGEL2Q9UJ55 1249 aa6.16□□□□□ -1.42
USP25-207ENST00000464435 CDC42EP3Q9UKI2 254 aa6.16□□□□□ -1.42
USP25-207ENST00000464435 CDY2AQ9Y6F7 541 aa6.16□□□□□ -1.42
USP25-207ENST00000464435 A0A0A6YYJ9 748 aa6.15□□□□□ -1.42
USP25-207ENST00000464435 CCDC194A0A1B0GVG4 234 aa6.15□□□□□ -1.42
USP25-207ENST00000464435 VSTM5A8MXK1 200 aa6.15□□□□□ -1.42
USP25-207ENST00000464435 CDC14BO60729 498 aa6.15□□□□□ -1.42
USP25-207ENST00000464435 COMTP21964 271 aa6.15□□□□□ -1.42
USP25-207ENST00000464435 LPOP22079 712 aaPredicted RBP6.15□□□□□ -1.42
USP25-207ENST00000464435 BCAR1P56945 870 aa6.15□□□□□ -1.42
USP25-207ENST00000464435 KLHDC10Q6PID8 442 aa6.15□□□□□ -1.42
USP25-207ENST00000464435 GAREM2Q75VX8 874 aa6.15□□□□□ -1.42
USP25-207ENST00000464435 CATIPQ7Z7H3 387 aa6.15□□□□□ -1.42
USP25-207ENST00000464435 CCDC146Q8IYE0 955 aa6.15□□□□□ -1.42
USP25-207ENST00000464435 SSH1Q8WYL5 1049 aa6.15□□□□□ -1.42
USP25-207ENST00000464435 RPGRQ92834 1020 aaKnown RBP6.15□□□□□ -1.42
USP25-207ENST00000464435 NUP88Q99567 741 aaPredicted RBP6.15□□□□□ -1.42
USP25-207ENST00000464435 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.15□□□□□ -1.42
USP25-207ENST00000464435 KCMF1Q9P0J7 381 aa6.15□□□□□ -1.42
USP25-207ENST00000464435 SAE1Q9UBE0 346 aaPredicted RBP6.15□□□□□ -1.42
USP25-207ENST00000464435 PCDHB6Q9Y5E3 794 aa6.15□□□□□ -1.42
USP25-207ENST00000464435 MATN2O00339 956 aa6.14□□□□□ -1.43
USP25-207ENST00000464435 MATN3O15232 486 aa6.14□□□□□ -1.43
USP25-207ENST00000464435 MTHFD2P13995 350 aa6.14□□□□□ -1.43
USP25-207ENST00000464435 FXR1P51114 621 aaKnown RBP eCLIP6.14□□□□□ -1.43
USP25-207ENST00000464435 ANTXR2P58335 489 aa6.14□□□□□ -1.43
USP25-207ENST00000464435 KIF23Q02241 960 aaPredicted RBP6.14□□□□□ -1.43
USP25-207ENST00000464435 HGFACQ04756 655 aa6.14□□□□□ -1.43
USP25-207ENST00000464435 DUSP8Q13202 625 aa6.14□□□□□ -1.43
USP25-207ENST00000464435 SPIDRQ14159 915 aa6.14□□□□□ -1.43
USP25-207ENST00000464435 PRKD1Q15139 912 aaPredicted RBP6.14□□□□□ -1.43
USP25-207ENST00000464435 TBR1Q16650 682 aa6.14□□□□□ -1.43
USP25-207ENST00000464435 DGKDQ16760 1214 aa6.14□□□□□ -1.43
USP25-207ENST00000464435 RRP12Q5JTH9 1297 aaKnown RBP6.14□□□□□ -1.43
USP25-207ENST00000464435 ZNF585AQ6P3V2 769 aa6.14□□□□□ -1.43
USP25-207ENST00000464435 FUKQ8N0W3 1084 aa6.14□□□□□ -1.43
USP25-207ENST00000464435 CDYL2Q8N8U2 506 aa6.14□□□□□ -1.43
USP25-207ENST00000464435 OR14C36Q8NHC7 312 aa6.14□□□□□ -1.43
USP25-207ENST00000464435 GAB3Q8WWW8 586 aa6.14□□□□□ -1.43
USP25-207ENST00000464435 CFHR4Q92496 578 aa6.14□□□□□ -1.43
USP25-207ENST00000464435 CLIP3Q96DZ5 547 aa6.14□□□□□ -1.43
USP25-207ENST00000464435 FAM89AQ96GI7 184 aa6.14□□□□□ -1.43
USP25-207ENST00000464435 FDXACB1Q9BRP7 624 aaPredicted RBP6.14□□□□□ -1.43
USP25-207ENST00000464435 NOL10Q9BSC4 688 aaKnown RBP6.14□□□□□ -1.43
USP25-207ENST00000464435 ACE2Q9BYF1 805 aaPredicted RBP6.14□□□□□ -1.43
USP25-207ENST00000464435 HAPLN2Q9GZV7 340 aa6.14□□□□□ -1.43
USP25-207ENST00000464435 KIAA1683Q9H0B3 1180 aa6.14□□□□□ -1.43
USP25-207ENST00000464435 SLC12A5Q9H2X9 1139 aa6.14□□□□□ -1.43
USP25-207ENST00000464435 DMRT3Q9NQL9 472 aa6.14□□□□□ -1.43
USP25-207ENST00000464435 CTDP1Q9Y5B0 961 aaPredicted RBP6.14□□□□□ -1.43
USP25-207ENST00000464435 A0A0A6YYK5 440 aaPredicted RBP6.13□□□□□ -1.43
USP25-207ENST00000464435 KIF3BO15066 747 aa6.13□□□□□ -1.43
USP25-207ENST00000464435 MAP4K4O95819 1239 aaPredicted RBP6.13□□□□□ -1.43
USP25-207ENST00000464435 CYP2C19P33261 490 aa6.13□□□□□ -1.43
USP25-207ENST00000464435 SLC5A3P53794 718 aa6.13□□□□□ -1.43
USP25-207ENST00000464435 ADKP55263 362 aaKnown RBP6.13□□□□□ -1.43
USP25-207ENST00000464435 KRTAP1-1Q07627 177 aa6.13□□□□□ -1.43
USP25-207ENST00000464435 ZNF267Q14586 743 aaPredicted RBP6.13□□□□□ -1.43
USP25-207ENST00000464435 BMP8AQ7Z5Y6 402 aa6.13□□□□□ -1.43
USP25-207ENST00000464435 ADGRE4PQ86SQ3 457 aa6.13□□□□□ -1.43
USP25-207ENST00000464435 BCL6BQ8N143 479 aaPredicted RBP6.13□□□□□ -1.43
USP25-207ENST00000464435 RABGGTAQ92696 567 aa6.13□□□□□ -1.43
USP25-207ENST00000464435 AIFM3Q96NN9 605 aa6.13□□□□□ -1.43
USP25-207ENST00000464435 DPYSL5Q9BPU6 564 aa6.13□□□□□ -1.43
USP25-207ENST00000464435 SOX7Q9BT81 388 aa6.13□□□□□ -1.43
USP25-207ENST00000464435 C12orf65Q9H3J6 166 aaKnown RBP6.13□□□□□ -1.43
USP25-207ENST00000464435 GEMIN8Q9NWZ8 242 aaKnown RBP6.13□□□□□ -1.43
USP25-207ENST00000464435 SLC26A4O43511 780 aa6.12□□□□□ -1.43
USP25-207ENST00000464435 ADRM1Q16186 407 aa6.12□□□□□ -1.43
USP25-207ENST00000464435 GFOD2Q3B7J2 385 aa6.12□□□□□ -1.43
USP25-207ENST00000464435 UAP1L1Q3KQV9 507 aa6.12□□□□□ -1.43
USP25-207ENST00000464435 IFIT1BQ5T764 474 aaKnown RBP6.12□□□□□ -1.43
USP25-207ENST00000464435 B3GNT9Q6UX72 402 aa6.12□□□□□ -1.43
USP25-207ENST00000464435 THEMISQ8N1K5 641 aaPredicted RBP6.12□□□□□ -1.43
USP25-207ENST00000464435 SH3RF3Q8TEJ3 882 aaPredicted RBP6.12□□□□□ -1.43
USP25-207ENST00000464435 TIFAQ96CG3 184 aa6.12□□□□□ -1.43
USP25-207ENST00000464435 PLA2G12BQ9BX93 195 aa6.12□□□□□ -1.43
USP25-207ENST00000464435 GTPBP4Q9BZE4 634 aaKnown RBP6.12□□□□□ -1.43
USP25-207ENST00000464435 CSRNP2Q9H175 543 aa6.12□□□□□ -1.43
USP25-207ENST00000464435 SLC6A15Q9H2J7 730 aa6.12□□□□□ -1.43
USP25-207ENST00000464435 OBP2AQ9NY56 170 aa6.12□□□□□ -1.43
USP25-207ENST00000464435 DDX20Q9UHI6 824 aaKnown RBP6.12□□□□□ -1.43
USP25-207ENST00000464435 SYNPO2Q9UMS6 1093 aa6.12□□□□□ -1.43
USP25-207ENST00000464435 GOLGA6CA6NDK9 693 aa6.11□□□□□ -1.43
USP25-207ENST00000464435 GOLGA6BA6NDN3 693 aa6.11□□□□□ -1.43
USP25-207ENST00000464435 AP1G1O43747 822 aa6.11□□□□□ -1.43
USP25-207ENST00000464435 AKAP8O43823 692 aaKnown RBP6.11□□□□□ -1.43
USP25-207ENST00000464435 SEC24DO94855 1032 aaPredicted RBP6.11□□□□□ -1.43
USP25-207ENST00000464435 GOLGA6DP0CG33 693 aa6.11□□□□□ -1.43
USP25-207ENST00000464435 MYBP10242 640 aa6.11□□□□□ -1.43
USP25-207ENST00000464435 STAT5BP51692 787 aa6.11□□□□□ -1.43
USP25-207ENST00000464435 MAMDC4Q6UXC1 1216 aa6.11□□□□□ -1.43
USP25-207ENST00000464435 MIER2Q8N344 545 aa6.11□□□□□ -1.43
USP25-207ENST00000464435 RSAD2Q8WXG1 361 aa6.11□□□□□ -1.43
USP25-207ENST00000464435 COA7Q96BR5 231 aa6.11□□□□□ -1.43
USP25-207ENST00000464435 RUNDC1Q96C34 613 aa6.11□□□□□ -1.43
USP25-207ENST00000464435 SLC7A6OSQ96CW6 309 aaPredicted RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms