RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 FAF1Q9UNN5 650 aaPredicted RBP3.87□□□□□ -1.79
COL8A1-205ENST00000463753 PPME1Q9Y570 386 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 TRIM17Q9Y577 477 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 EDC4Q6P2E9 1401 aaKnown RBP3.87□□□□□ -1.79
COL8A1-205ENST00000463753 PNMA6EA0A0J9YXQ4 647 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 PSMD14O00487 310 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 FBP2O00757 339 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 XPOTO43592 962 aaKnown RBP3.87□□□□□ -1.79
COL8A1-205ENST00000463753 DKC1O60832 514 aaKnown RBP eCLIP3.87□□□□□ -1.79
COL8A1-205ENST00000463753 DNAJC6O75061 913 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 ENTPD5O75356 428 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 FBXO21O94952 628 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 HEXIM1O94992 359 aaKnown RBP3.87□□□□□ -1.79
COL8A1-205ENST00000463753 OR6B1O95007 311 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 BAG3O95817 575 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 LDHBP07195 334 aaKnown RBP3.87□□□□□ -1.79
COL8A1-205ENST00000463753 GLI1P08151 1106 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 POU3F3P20264 500 aaPredicted RBP3.87□□□□□ -1.79
COL8A1-205ENST00000463753 ENPP1P22413 925 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 SYKP43405 635 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 ERFP50548 548 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 SH3BGRP55822 239 aaPredicted RBP3.87□□□□□ -1.79
COL8A1-205ENST00000463753 CDK17Q00537 523 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 CYLC2Q14093 348 aaPredicted RBP3.87□□□□□ -1.79
COL8A1-205ENST00000463753 PPP2R5BQ15173 497 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 CRY1Q16526 586 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 KRT71Q3SY84 523 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 CCDC153Q494R4 210 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 VWA3BQ502W6 1294 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 CFAP70Q5T0N1 1121 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 TBC1D9BQ66K14 1250 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 HAUS3Q68CZ6 603 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 ISLR2Q6UXK2 745 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 TMTC1Q8IUR5 882 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 IFT20Q8IY31 132 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.87□□□□□ -1.79
COL8A1-205ENST00000463753 TTLL6Q8N841 843 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 SYT2Q8N9I0 419 aaPredicted RBP3.87□□□□□ -1.79
COL8A1-205ENST00000463753 DTX3LQ8TDB6 740 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 LRRC8CQ8TDW0 803 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 ASAP3Q8TDY4 903 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 NAT14Q8WUY8 206 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 SCG3Q8WXD2 468 aaKnown RBP3.87□□□□□ -1.79
COL8A1-205ENST00000463753 AZIN2Q96A70 460 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 FAM136AQ96C01 138 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 GPATCH3Q96I76 525 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 ZNF333Q96JL9 665 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 TMEM237Q96Q45 408 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 CHP1Q99653 195 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 GDF15Q99988 308 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 C2orf49Q9BVC5 232 aaPredicted RBP3.87□□□□□ -1.79
COL8A1-205ENST00000463753 MAK16Q9BXY0 300 aaKnown RBP3.87□□□□□ -1.79
COL8A1-205ENST00000463753 SNX25Q9H3E2 840 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 ATP8A2Q9NTI2 1148 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 DDX25Q9UHL0 483 aaKnown RBP3.87□□□□□ -1.79
COL8A1-205ENST00000463753 LZTS1Q9Y250 596 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 FAM32AQ9Y421 112 aaKnown RBP3.87□□□□□ -1.79
COL8A1-205ENST00000463753 HYOU1Q9Y4L1 999 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 RBM8AQ9Y5S9 174 aaKnown RBP3.87□□□□□ -1.79
COL8A1-205ENST00000463753 TAF6LQ9Y6J9 622 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 PCDH11XQ9BZA7 1347 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 PCDH11YQ9BZA8 1340 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 LRRC37A2A6NM11 1700 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 PRR33A8MZF0 331 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 F6X3S4 739 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 H7C1D1 291 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 CPLX1O14810 134 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 SPTLC2O15270 562 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 PEX11AO75192 247 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 ADH1AP07327 375 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 EEF2P13639 858 aaKnown RBP3.86□□□□□ -1.79
COL8A1-205ENST00000463753 S100A1P23297 94 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 PSMA5P28066 241 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 PRKCIP41743 596 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 EIF2B2P49770 351 aaKnown RBP3.86□□□□□ -1.79
COL8A1-205ENST00000463753 WASHC5Q12768 1159 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 MSLNQ13421 630 aaPredicted RBP3.86□□□□□ -1.79
COL8A1-205ENST00000463753 ITIH4Q14624 930 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 ANKRD1Q15327 319 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 CERKLQ49MI3 558 aaPredicted RBP3.86□□□□□ -1.79
COL8A1-205ENST00000463753 AGAP9Q5VTM2 703 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 RGMBQ6NW40 437 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 LLGL2Q6P1M3 1020 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 NFRKBQ6P4R8 1299 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 PRR23CQ6ZRP0 262 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 TAOK1Q7L7X3 1001 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 WAPLQ7Z5K2 1190 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 OSTM1Q86WC4 334 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 CNGA4Q8IV77 575 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 C7orf57Q8NEG2 295 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 TTLL11Q8NHH1 800 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 CCDC110Q8TBZ0 833 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 MGARPQ8TDB4 240 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 APPBP2Q92624 585 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 RAB3IPQ96QF0 476 aaPredicted RBP3.86□□□□□ -1.79
COL8A1-205ENST00000463753 TUBGCP5Q96RT8 1024 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 FNBP1Q96RU3 617 aa3.86□□□□□ -1.79
COL8A1-205ENST00000463753 HNRNPABQ99729 332 aaKnown RBP3.86□□□□□ -1.79
COL8A1-205ENST00000463753 PRMT1Q99873 361 aaKnown RBP3.86□□□□□ -1.79
COL8A1-205ENST00000463753 SPZ1Q9BXG8 430 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms