RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 TMEM87AQ8NBN3 555 aa12.48□□□□□ -0.41
SSR3-202ENST00000463503 BBXQ8WY36 941 aaPredicted RBP12.48□□□□□ -0.41
SSR3-202ENST00000463503 LPPQ93052 612 aa12.48□□□□□ -0.41
SSR3-202ENST00000463503 ZNF668Q96K58 619 aaPredicted RBP12.48□□□□□ -0.41
SSR3-202ENST00000463503 MAN1C1Q9NR34 630 aa12.48□□□□□ -0.41
SSR3-202ENST00000463503 SLC2A4RGQ9NR83 387 aa12.48□□□□□ -0.41
SSR3-202ENST00000463503 NCDNQ9UBB6 729 aa12.48□□□□□ -0.41
SSR3-202ENST00000463503 KCNJ14Q9UNX9 436 aa12.48□□□□□ -0.41
SSR3-202ENST00000463503 AKT3Q9Y243 479 aa12.48□□□□□ -0.41
SSR3-202ENST00000463503 NBEAQ8NFP9 2946 aa12.48□□□□□ -0.41
SSR3-202ENST00000463503 IGF2RP11717 2491 aa12.47□□□□□ -0.41
SSR3-202ENST00000463503 TICRRQ7Z2Z1 1910 aa12.47□□□□□ -0.41
SSR3-202ENST00000463503 ANHXE9PGG2 379 aa12.47□□□□□ -0.41
SSR3-202ENST00000463503 FAM86B1E9PN63 330 aa12.47□□□□□ -0.41
SSR3-202ENST00000463503 STX6O43752 255 aa12.47□□□□□ -0.41
SSR3-202ENST00000463503 DTNBO60941 627 aa12.47□□□□□ -0.41
SSR3-202ENST00000463503 FAM86B2P0C5J1 330 aa12.47□□□□□ -0.41
SSR3-202ENST00000463503 SDHBP21912 280 aa12.47□□□□□ -0.41
SSR3-202ENST00000463503 GBP2P32456 591 aaPredicted RBP12.47□□□□□ -0.41
SSR3-202ENST00000463503 PHKA2P46019 1235 aa12.47□□□□□ -0.41
SSR3-202ENST00000463503 LMNB2Q03252 620 aa12.47□□□□□ -0.41
SSR3-202ENST00000463503 NONOQ15233 471 aaKnown RBP eCLIP12.47□□□□□ -0.41
SSR3-202ENST00000463503 SWSAP1Q6NVH7 229 aa12.47□□□□□ -0.41
SSR3-202ENST00000463503 KRT25Q7Z3Z0 450 aa12.47□□□□□ -0.41
SSR3-202ENST00000463503 DIS3L2Q8IYB7 885 aaKnown RBP12.47□□□□□ -0.41
SSR3-202ENST00000463503 CRYGNQ8WXF5 182 aa12.47□□□□□ -0.41
SSR3-202ENST00000463503 RSPH1Q8WYR4 309 aa12.47□□□□□ -0.41
SSR3-202ENST00000463503 NXPE3Q969Y0 559 aa12.47□□□□□ -0.41
SSR3-202ENST00000463503 ZNF707Q96C28 371 aaPredicted RBP12.47□□□□□ -0.41
SSR3-202ENST00000463503 DDX23Q9BUQ8 820 aaKnown RBP12.47□□□□□ -0.41
SSR3-202ENST00000463503 TRAIPQ9BWF2 469 aa12.47□□□□□ -0.41
SSR3-202ENST00000463503 ANO3Q9BYT9 981 aa12.47□□□□□ -0.41
SSR3-202ENST00000463503 EPC1Q9H2F5 836 aa12.47□□□□□ -0.41
SSR3-202ENST00000463503 GJB4Q9NTQ9 266 aa12.47□□□□□ -0.41
SSR3-202ENST00000463503 DAXXQ9UER7 740 aaPredicted RBP12.47□□□□□ -0.41
SSR3-202ENST00000463503 CDV3Q9UKY7 258 aaKnown RBP12.47□□□□□ -0.41
SSR3-202ENST00000463503 CIZ1Q9ULV3 898 aaPredicted RBP12.47□□□□□ -0.41
SSR3-202ENST00000463503 SMG5Q9UPR3 1016 aaKnown RBP12.47□□□□□ -0.41
SSR3-202ENST00000463503 SPAG17Q6Q759 2223 aa12.46□□□□□ -0.41
SSR3-202ENST00000463503 IGLV3-22A0A075B6J6 115 aa12.46□□□□□ -0.41
SSR3-202ENST00000463503 DCDC2BA2VCK2 349 aa12.46□□□□□ -0.41
SSR3-202ENST00000463503 CARNS1A5YM72 827 aa12.46□□□□□ -0.41
SSR3-202ENST00000463503 SPDYE4A6NLX3 237 aa12.46□□□□□ -0.41
SSR3-202ENST00000463503 BTBD18B2RXH4 712 aa12.46□□□□□ -0.41
SSR3-202ENST00000463503 H3BQV1 296 aa12.46□□□□□ -0.41
SSR3-202ENST00000463503 RFPL2O75678 378 aa12.46□□□□□ -0.41
SSR3-202ENST00000463503 CYP3A4P08684 503 aa12.46□□□□□ -0.41
SSR3-202ENST00000463503 KLRC2P26717 231 aa12.46□□□□□ -0.41
SSR3-202ENST00000463503 SREBF1P36956 1147 aa12.46□□□□□ -0.41
SSR3-202ENST00000463503 STARD6P59095 220 aa12.46□□□□□ -0.41
SSR3-202ENST00000463503 EFCAB12Q6NXP0 572 aa12.46□□□□□ -0.41
SSR3-202ENST00000463503 DCLRE1AQ6PJP8 1040 aa12.46□□□□□ -0.41
SSR3-202ENST00000463503 NIPA1Q7RTP0 329 aa12.46□□□□□ -0.41
SSR3-202ENST00000463503 ZNF280BQ86YH2 543 aa12.46□□□□□ -0.41
SSR3-202ENST00000463503 ZBTB44Q8NCP5 570 aa12.46□□□□□ -0.41
SSR3-202ENST00000463503 NELL1Q92832 810 aa12.46□□□□□ -0.41
SSR3-202ENST00000463503 MAP7D2Q96T17 732 aa12.46□□□□□ -0.41
SSR3-202ENST00000463503 EMILIN2Q9BXX0 1053 aa12.46□□□□□ -0.41
SSR3-202ENST00000463503 ZSCAN16Q9H4T2 348 aaPredicted RBP12.46□□□□□ -0.41
SSR3-202ENST00000463503 PARD6AQ9NPB6 346 aa12.46□□□□□ -0.41
SSR3-202ENST00000463503 DACT1Q9NYF0 836 aa12.46□□□□□ -0.41
SSR3-202ENST00000463503 RALYQ9UKM9 306 aaKnown RBP12.46□□□□□ -0.41
SSR3-202ENST00000463503 FBXO4Q9UKT5 387 aa12.46□□□□□ -0.41
SSR3-202ENST00000463503 MTMR6Q9Y217 621 aa12.46□□□□□ -0.41
SSR3-202ENST00000463503 PCDHGA2Q9Y5H1 932 aa12.46□□□□□ -0.41
SSR3-202ENST00000463503 PKD1L2Q7Z442 2459 aa12.45□□□□□ -0.42
SSR3-202ENST00000463503 CCDC195A0A1B0GUA6 201 aa12.45□□□□□ -0.42
SSR3-202ENST00000463503 PRR5-ARHGAP8B1AHC4 643 aa12.45□□□□□ -0.42
SSR3-202ENST00000463503 ADAMTS3O15072 1205 aa12.45□□□□□ -0.42
SSR3-202ENST00000463503 INPPL1O15357 1258 aa12.45□□□□□ -0.42
SSR3-202ENST00000463503 MAGEB2O15479 319 aa12.45□□□□□ -0.42
SSR3-202ENST00000463503 LILRB5O75023 590 aa12.45□□□□□ -0.42
SSR3-202ENST00000463503 CSDE1O75534 798 aaKnown RBP12.45□□□□□ -0.42
SSR3-202ENST00000463503 EFEMP2O95967 443 aa12.45□□□□□ -0.42
SSR3-202ENST00000463503 SSBP05455 408 aaKnown RBP eCLIP12.45□□□□□ -0.42
SSR3-202ENST00000463503 LAMP2P13473 410 aa12.45□□□□□ -0.42
SSR3-202ENST00000463503 USP11P51784 963 aa12.45□□□□□ -0.42
SSR3-202ENST00000463503 NUCB2P80303 420 aa12.45□□□□□ -0.42
SSR3-202ENST00000463503 ARHGAP8P85298 464 aa12.45□□□□□ -0.42
SSR3-202ENST00000463503 LONRF3Q496Y0 759 aa12.45□□□□□ -0.42
SSR3-202ENST00000463503 NOMO2Q5JPE7 1267 aa12.45□□□□□ -0.42
SSR3-202ENST00000463503 MIS18BP1Q6P0N0 1132 aa12.45□□□□□ -0.42
SSR3-202ENST00000463503 MOXD1Q6UVY6 613 aa12.45□□□□□ -0.42
SSR3-202ENST00000463503 CYP26C1Q6V0L0 522 aa12.45□□□□□ -0.42
SSR3-202ENST00000463503 BRAPQ7Z569 592 aa12.45□□□□□ -0.42
SSR3-202ENST00000463503 NOSTRINQ8IVI9 506 aa12.45□□□□□ -0.42
SSR3-202ENST00000463503 CKAP2LQ8IYA6 745 aa12.45□□□□□ -0.42
SSR3-202ENST00000463503 RNF168Q8IYW5 571 aaPredicted RBP12.45□□□□□ -0.42
SSR3-202ENST00000463503 ZNF710Q8N1W2 664 aa12.45□□□□□ -0.42
SSR3-202ENST00000463503 GPR161Q8N6U8 529 aaKnown RBP12.45□□□□□ -0.42
SSR3-202ENST00000463503 OXER1Q8TDS5 423 aa12.45□□□□□ -0.42
SSR3-202ENST00000463503 STAMQ92783 540 aa12.45□□□□□ -0.42
SSR3-202ENST00000463503 RTKNQ9BST9 563 aa12.45□□□□□ -0.42
SSR3-202ENST00000463503 FOXD4L1Q9NU39 408 aa12.45□□□□□ -0.42
SSR3-202ENST00000463503 CEP131Q9UPN4 1083 aa12.45□□□□□ -0.42
SSR3-202ENST00000463503 NUMBLQ9Y6R0 609 aa12.45□□□□□ -0.42
SSR3-202ENST00000463503 AKAP13Q12802 2813 aa12.45□□□□□ -0.42
SSR3-202ENST00000463503 F5P12259 2224 aa12.45□□□□□ -0.42
SSR3-202ENST00000463503 IPO5O00410 1097 aaKnown RBP12.44□□□□□ -0.42
SSR3-202ENST00000463503 ZNF862O60290 1169 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms