RNA–Protein interactions for RNA: ENST00000462473.1

SLC6A1-204, Transcript of solute carrier family 6 member 1, humanhuman

TSL 3

Gene SLC6A1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-204ENST00000462473 GRIN1Q05586 938 aa20.84■□□□□ 0.93
SLC6A1-204ENST00000462473 DMP1Q13316 513 aaPredicted RBP20.84■□□□□ 0.93
SLC6A1-204ENST00000462473 COL19A1Q14993 1142 aa20.84■□□□□ 0.93
SLC6A1-204ENST00000462473 LEXMQ3ZCV2 418 aa20.84■□□□□ 0.93
SLC6A1-204ENST00000462473 TMEM119Q4V9L6 283 aa20.84■□□□□ 0.93
SLC6A1-204ENST00000462473 ZNF280BQ86YH2 543 aa20.84■□□□□ 0.93
SLC6A1-204ENST00000462473 TMEM169Q96HH4 297 aa20.84■□□□□ 0.93
SLC6A1-204ENST00000462473 TCF25Q9BQ70 676 aa20.84■□□□□ 0.93
SLC6A1-204ENST00000462473 TIPINQ9BVW5 301 aa20.84■□□□□ 0.93
SLC6A1-204ENST00000462473 CCDC113Q9H0I3 377 aa20.84■□□□□ 0.93
SLC6A1-204ENST00000462473 ENTPD7Q9NQZ7 604 aa20.84■□□□□ 0.93
SLC6A1-204ENST00000462473 K7ERI5 159 aa20.83■□□□□ 0.93
SLC6A1-204ENST00000462473 FSCN2O14926 492 aa20.83■□□□□ 0.93
SLC6A1-204ENST00000462473 GALTP07902 379 aa20.83■□□□□ 0.93
SLC6A1-204ENST00000462473 MARCKSP29966 332 aaPredicted RBP20.83■□□□□ 0.93
SLC6A1-204ENST00000462473 AFF1P51825 1210 aaKnown RBP20.83■□□□□ 0.93
SLC6A1-204ENST00000462473 RAD51AP2Q09MP3 1159 aa20.83■□□□□ 0.93
SLC6A1-204ENST00000462473 PTPAQ15257 358 aa20.83■□□□□ 0.93
SLC6A1-204ENST00000462473 PLPP4Q5VZY2 271 aa20.83■□□□□ 0.93
SLC6A1-204ENST00000462473 TMC7Q7Z402 723 aa20.83■□□□□ 0.93
SLC6A1-204ENST00000462473 DAW1Q8N136 415 aa20.83■□□□□ 0.93
SLC6A1-204ENST00000462473 UHRF1Q96T88 793 aaPredicted RBP20.83■□□□□ 0.93
SLC6A1-204ENST00000462473 GAD1Q99259 594 aa20.83■□□□□ 0.93
SLC6A1-204ENST00000462473 ADPGKQ9BRR6 497 aa20.83■□□□□ 0.93
SLC6A1-204ENST00000462473 NXF3Q9H4D5 531 aaKnown RBP20.83■□□□□ 0.93
SLC6A1-204ENST00000462473 TLE6Q9H808 572 aa20.83■□□□□ 0.93
SLC6A1-204ENST00000462473 NGRNQ9NPE2 291 aaKnown RBP20.83■□□□□ 0.93
SLC6A1-204ENST00000462473 DNAJB4Q9UDY4 337 aa20.83■□□□□ 0.93
SLC6A1-204ENST00000462473 PARP2Q9UGN5 583 aa20.83■□□□□ 0.93
SLC6A1-204ENST00000462473 GIT1Q9Y2X7 761 aa20.83■□□□□ 0.93
SLC6A1-204ENST00000462473 ARL5CA6NH57 179 aa20.82■□□□□ 0.92
SLC6A1-204ENST00000462473 TTLL13PA6NNM8 815 aa20.82■□□□□ 0.92
SLC6A1-204ENST00000462473 SFI1A8K8P3 1242 aa20.82■□□□□ 0.92
SLC6A1-204ENST00000462473 DDHD2O94830 711 aa20.82■□□□□ 0.92
SLC6A1-204ENST00000462473 ALDH2P05091 517 aa20.82■□□□□ 0.92
SLC6A1-204ENST00000462473 AKAP5P24588 427 aa20.82■□□□□ 0.92
SLC6A1-204ENST00000462473 GUCY2CP25092 1073 aa20.82■□□□□ 0.92
SLC6A1-204ENST00000462473 MLH1P40692 756 aa20.82■□□□□ 0.92
SLC6A1-204ENST00000462473 NPTX2P47972 431 aa20.82■□□□□ 0.92
SLC6A1-204ENST00000462473 SLC12A3P55017 1021 aa20.82■□□□□ 0.92
SLC6A1-204ENST00000462473 ADAM15Q13444 863 aa20.82■□□□□ 0.92
SLC6A1-204ENST00000462473 BMS1Q14692 1282 aaKnown RBP20.82■□□□□ 0.92
SLC6A1-204ENST00000462473 CTC1Q2NKJ3 1217 aa20.82■□□□□ 0.92
SLC6A1-204ENST00000462473 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.82■□□□□ 0.92
SLC6A1-204ENST00000462473 IGSF21Q96ID5 467 aa20.82■□□□□ 0.92
SLC6A1-204ENST00000462473 PDZD7Q9H5P4 517 aa20.82■□□□□ 0.92
SLC6A1-204ENST00000462473 C17orf75Q9HAS0 396 aa20.82■□□□□ 0.92
SLC6A1-204ENST00000462473 KMT5AQ9NQR1 393 aa20.82■□□□□ 0.92
SLC6A1-204ENST00000462473 KCND2Q9NZV8 630 aa20.82■□□□□ 0.92
SLC6A1-204ENST00000462473 USP20Q9Y2K6 914 aa20.82■□□□□ 0.92
SLC6A1-204ENST00000462473 PLXNA4Q9HCM2 1894 aa20.81■□□□□ 0.92
SLC6A1-204ENST00000462473 PRUNE2Q8WUY3 3088 aa20.81■□□□□ 0.92
SLC6A1-204ENST00000462473 PER2O15055 1255 aa20.81■□□□□ 0.92
SLC6A1-204ENST00000462473 LINC01565O15544 149 aa20.81■□□□□ 0.92
SLC6A1-204ENST00000462473 LTBRP36941 435 aa20.81■□□□□ 0.92
SLC6A1-204ENST00000462473 SLC11A1P49279 550 aa20.81■□□□□ 0.92
SLC6A1-204ENST00000462473 MAPK7Q13164 816 aa20.81■□□□□ 0.92
SLC6A1-204ENST00000462473 KARSQ15046 597 aaKnown RBP20.81■□□□□ 0.92
SLC6A1-204ENST00000462473 PUS10Q3MIT2 529 aaKnown RBP20.81■□□□□ 0.92
SLC6A1-204ENST00000462473 EFHBQ8N7U6 833 aa20.81■□□□□ 0.92
SLC6A1-204ENST00000462473 ZFP42Q96MM3 310 aa20.81■□□□□ 0.92
SLC6A1-204ENST00000462473 TMEM175Q9BSA9 504 aa20.81■□□□□ 0.92
SLC6A1-204ENST00000462473 KCNG1Q9UIX4 513 aa20.81■□□□□ 0.92
SLC6A1-204ENST00000462473 FAN1Q9Y2M0 1017 aa20.81■□□□□ 0.92
SLC6A1-204ENST00000462473 SPTBN5Q9NRC6 3674 aaKnown RBP20.81■□□□□ 0.92
SLC6A1-204ENST00000462473 TRANK1O15050 2925 aa20.81■□□□□ 0.92
SLC6A1-204ENST00000462473 INPPL1O15357 1258 aa20.8■□□□□ 0.92
SLC6A1-204ENST00000462473 EDN1P05305 212 aa20.8■□□□□ 0.92
SLC6A1-204ENST00000462473 CA8P35219 290 aa20.8■□□□□ 0.92
SLC6A1-204ENST00000462473 NDUFV1P49821 464 aa20.8■□□□□ 0.92
SLC6A1-204ENST00000462473 SCNN1GP51170 649 aa20.8■□□□□ 0.92
SLC6A1-204ENST00000462473 DHX8Q14562 1220 aaKnown RBP20.8■□□□□ 0.92
SLC6A1-204ENST00000462473 SPECC1Q5M775 1068 aa20.8■□□□□ 0.92
SLC6A1-204ENST00000462473 PTCRAQ6ISU1 281 aaPredicted RBP20.8■□□□□ 0.92
SLC6A1-204ENST00000462473 TMEM173Q86WV6 379 aaPredicted RBP20.8■□□□□ 0.92
SLC6A1-204ENST00000462473 USP28Q96RU2 1077 aa20.8■□□□□ 0.92
SLC6A1-204ENST00000462473 TMEM134Q9H6X4 195 aa20.8■□□□□ 0.92
SLC6A1-204ENST00000462473 MIOSQ9NXC5 875 aa20.8■□□□□ 0.92
SLC6A1-204ENST00000462473 RBM19Q9Y4C8 960 aaKnown RBP20.8■□□□□ 0.92
SLC6A1-204ENST00000462473 SRPRBQ9Y5M8 271 aaKnown RBP20.8■□□□□ 0.92
SLC6A1-204ENST00000462473 UNC80Q8N2C7 3258 aa20.8■□□□□ 0.92
SLC6A1-204ENST00000462473 PHLPP2Q6ZVD8 1323 aa20.79■□□□□ 0.92
SLC6A1-204ENST00000462473 B4GALT3O60512 393 aa20.79■□□□□ 0.92
SLC6A1-204ENST00000462473 PDIA4P13667 645 aaKnown RBP20.79■□□□□ 0.92
SLC6A1-204ENST00000462473 PLCG1P19174 1290 aa20.79■□□□□ 0.92
SLC6A1-204ENST00000462473 SMTNP53814 917 aa20.79■□□□□ 0.92
SLC6A1-204ENST00000462473 DLX2Q07687 328 aaPredicted RBP20.79■□□□□ 0.92
SLC6A1-204ENST00000462473 SMC1AQ14683 1233 aaKnown RBP20.79■□□□□ 0.92
SLC6A1-204ENST00000462473 NT5DC1Q5TFE4 455 aa20.79■□□□□ 0.92
SLC6A1-204ENST00000462473 ATF7IP2Q5U623 682 aa20.79■□□□□ 0.92
SLC6A1-204ENST00000462473 DDX53Q86TM3 631 aaKnown RBP20.79■□□□□ 0.92
SLC6A1-204ENST00000462473 VPS52Q8N1B4 723 aa20.79■□□□□ 0.92
SLC6A1-204ENST00000462473 SPRYD3Q8NCJ5 442 aa20.79■□□□□ 0.92
SLC6A1-204ENST00000462473 EPSTI1Q96J88 318 aa20.79■□□□□ 0.92
SLC6A1-204ENST00000462473 NECAB3Q96P71 396 aaPredicted RBP20.79■□□□□ 0.92
SLC6A1-204ENST00000462473 RPS6KC1Q96S38 1066 aa20.79■□□□□ 0.92
SLC6A1-204ENST00000462473 CDCA3Q99618 268 aaPredicted RBP20.79■□□□□ 0.92
SLC6A1-204ENST00000462473 CCSER1Q9C0I3 900 aa20.79■□□□□ 0.92
SLC6A1-204ENST00000462473 SNTG2Q9NY99 539 aa20.79■□□□□ 0.92
SLC6A1-204ENST00000462473 KLK14Q9P0G3 267 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms