RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 DHX38Q92620 1227 aaKnown RBP11.68□□□□□ -0.54
RTF1-202ENST00000462276 ACO2Q99798 780 aaKnown RBP11.68□□□□□ -0.54
RTF1-202ENST00000462276 DUSP9Q99956 384 aaKnown RBP11.68□□□□□ -0.54
RTF1-202ENST00000462276 SRRTQ9BXP5 876 aaKnown RBP11.68□□□□□ -0.54
RTF1-202ENST00000462276 GINS2Q9Y248 185 aa11.68□□□□□ -0.54
RTF1-202ENST00000462276 FRMD4BQ9Y2L6 1034 aa11.68□□□□□ -0.54
RTF1-202ENST00000462276 A0A0B4J269 797 aa11.67□□□□□ -0.54
RTF1-202ENST00000462276 N4BP3O15049 544 aa11.67□□□□□ -0.54
RTF1-202ENST00000462276 PQBP1O60828 265 aaKnown RBP11.67□□□□□ -0.54
RTF1-202ENST00000462276 RPS6KA5O75582 802 aa11.67□□□□□ -0.54
RTF1-202ENST00000462276 ZNF18P17022 549 aa11.67□□□□□ -0.54
RTF1-202ENST00000462276 CDK11BP21127 795 aaKnown RBP11.67□□□□□ -0.54
RTF1-202ENST00000462276 PROZP22891 400 aa11.67□□□□□ -0.54
RTF1-202ENST00000462276 NR2F2P24468 414 aa11.67□□□□□ -0.54
RTF1-202ENST00000462276 PSMC2P35998 433 aaKnown RBP11.67□□□□□ -0.54
RTF1-202ENST00000462276 PMS1P54277 932 aaKnown RBP11.67□□□□□ -0.54
RTF1-202ENST00000462276 MARSP56192 900 aaKnown RBP11.67□□□□□ -0.54
RTF1-202ENST00000462276 PPP2R3AQ06190 1150 aa11.67□□□□□ -0.54
RTF1-202ENST00000462276 MCL1Q07820 350 aa11.67□□□□□ -0.54
RTF1-202ENST00000462276 AMHR2Q16671 573 aa11.67□□□□□ -0.54
RTF1-202ENST00000462276 TMEM132AQ24JP5 1023 aa11.67□□□□□ -0.54
RTF1-202ENST00000462276 DCAF4L1Q3SXM0 396 aa11.67□□□□□ -0.54
RTF1-202ENST00000462276 ATF7IP2Q5U623 682 aa11.67□□□□□ -0.54
RTF1-202ENST00000462276 CDKAL1Q5VV42 579 aa11.67□□□□□ -0.54
RTF1-202ENST00000462276 ARMCX5Q6P1M9 558 aa11.67□□□□□ -0.54
RTF1-202ENST00000462276 NOTUMQ6P988 496 aa11.67□□□□□ -0.54
RTF1-202ENST00000462276 MPZL3Q6UWV2 235 aa11.67□□□□□ -0.54
RTF1-202ENST00000462276 FRMD5Q7Z6J6 570 aa11.67□□□□□ -0.54
RTF1-202ENST00000462276 LUZP1Q86V48 1076 aa11.67□□□□□ -0.54
RTF1-202ENST00000462276 XXYLT1Q8NBI6 393 aa11.67□□□□□ -0.54
RTF1-202ENST00000462276 PPP1R13LQ8WUF5 828 aa11.67□□□□□ -0.54
RTF1-202ENST00000462276 POMGNT1Q8WZA1 660 aa11.67□□□□□ -0.54
RTF1-202ENST00000462276 FBXL18Q96ME1 805 aa11.67□□□□□ -0.54
RTF1-202ENST00000462276 MED15Q96RN5 788 aa11.67□□□□□ -0.54
RTF1-202ENST00000462276 OSMRQ99650 979 aa11.67□□□□□ -0.54
RTF1-202ENST00000462276 ADPGKQ9BRR6 497 aa11.67□□□□□ -0.54
RTF1-202ENST00000462276 TCHPQ9BT92 498 aa11.67□□□□□ -0.54
RTF1-202ENST00000462276 TARS2Q9BW92 718 aaKnown RBP11.67□□□□□ -0.54
RTF1-202ENST00000462276 RBSNQ9H1K0 784 aa11.67□□□□□ -0.54
RTF1-202ENST00000462276 MINDY3Q9H8M7 445 aa11.67□□□□□ -0.54
RTF1-202ENST00000462276 PTPRHQ9HD43 1115 aa11.67□□□□□ -0.54
RTF1-202ENST00000462276 FANCLQ9NW38 375 aa11.67□□□□□ -0.54
RTF1-202ENST00000462276 EXTL3O43909 919 aa11.66□□□□□ -0.54
RTF1-202ENST00000462276 TSPAN1O60635 241 aa11.66□□□□□ -0.54
RTF1-202ENST00000462276 EXOC3O60645 756 aa11.66□□□□□ -0.54
RTF1-202ENST00000462276 TPM2P07951 284 aa11.66□□□□□ -0.54
RTF1-202ENST00000462276 IQCF3P0C7M6 154 aa11.66□□□□□ -0.54
RTF1-202ENST00000462276 MCF2P10911 925 aa11.66□□□□□ -0.54
RTF1-202ENST00000462276 EPB41P11171 864 aaKnown RBP11.66□□□□□ -0.54
RTF1-202ENST00000462276 SKIP12755 728 aa11.66□□□□□ -0.54
RTF1-202ENST00000462276 ADSSP30520 456 aa11.66□□□□□ -0.54
RTF1-202ENST00000462276 MRE11P49959 708 aa11.66□□□□□ -0.54
RTF1-202ENST00000462276 ATN1P54259 1190 aaPredicted RBP11.66□□□□□ -0.54
RTF1-202ENST00000462276 MCCD1P59942 119 aaPredicted RBP11.66□□□□□ -0.54
RTF1-202ENST00000462276 TMEM62Q0P6H9 643 aa11.66□□□□□ -0.54
RTF1-202ENST00000462276 FAAP100Q0VG06 881 aa11.66□□□□□ -0.54
RTF1-202ENST00000462276 TRIM60Q495X7 471 aa11.66□□□□□ -0.54
RTF1-202ENST00000462276 FBXO47Q5MNV8 452 aa11.66□□□□□ -0.54
RTF1-202ENST00000462276 ZNF618Q5T7W0 954 aa11.66□□□□□ -0.54
RTF1-202ENST00000462276 LRRC55Q6ZSA7 311 aa11.66□□□□□ -0.54
RTF1-202ENST00000462276 LRRC8DQ7L1W4 858 aa11.66□□□□□ -0.54
RTF1-202ENST00000462276 RNF214Q8ND24 703 aa11.66□□□□□ -0.54
RTF1-202ENST00000462276 DIS3LQ8TF46 1054 aaKnown RBP11.66□□□□□ -0.54
RTF1-202ENST00000462276 WNT8BQ93098 351 aa11.66□□□□□ -0.54
RTF1-202ENST00000462276 TRAIPQ9BWF2 469 aa11.66□□□□□ -0.54
RTF1-202ENST00000462276 CDHR5Q9HBB8 845 aa11.66□□□□□ -0.54
RTF1-202ENST00000462276 AGPAT5Q9NUQ2 364 aa11.66□□□□□ -0.54
RTF1-202ENST00000462276 ZMYM2Q9UBW7 1377 aa11.66□□□□□ -0.54
RTF1-202ENST00000462276 PDE4DIPQ5VU43 2346 aa11.65□□□□□ -0.54
RTF1-202ENST00000462276 TRIM49BA6NDI0 452 aa11.65□□□□□ -0.54
RTF1-202ENST00000462276 ZNF233A6NK53 670 aa11.65□□□□□ -0.54
RTF1-202ENST00000462276 ANKRD63C9JTQ0 380 aa11.65□□□□□ -0.54
RTF1-202ENST00000462276 OGTO15294 1046 aa11.65□□□□□ -0.54
RTF1-202ENST00000462276 TPM3P06753 285 aa11.65□□□□□ -0.54
RTF1-202ENST00000462276 CLTBP09497 229 aa11.65□□□□□ -0.54
RTF1-202ENST00000462276 ZSCAN20P17040 1043 aaPredicted RBP11.65□□□□□ -0.54
RTF1-202ENST00000462276 ARF4P18085 180 aaPredicted RBP11.65□□□□□ -0.54
RTF1-202ENST00000462276 EN2P19622 333 aaPredicted RBP11.65□□□□□ -0.54
RTF1-202ENST00000462276 HOXA11P31270 313 aaPredicted RBP11.65□□□□□ -0.54
RTF1-202ENST00000462276 RFC2P35250 354 aa11.65□□□□□ -0.54
RTF1-202ENST00000462276 NOLC1Q14978 699 aaKnown RBP eCLIP11.65□□□□□ -0.54
RTF1-202ENST00000462276 SURF1Q15526 300 aa11.65□□□□□ -0.54
RTF1-202ENST00000462276 TCP11X2Q5H9J9 407 aa11.65□□□□□ -0.54
RTF1-202ENST00000462276 SLC27A1Q6PCB7 646 aa11.65□□□□□ -0.54
RTF1-202ENST00000462276 TRAF7Q6Q0C0 670 aa11.65□□□□□ -0.54
RTF1-202ENST00000462276 INTS8Q75QN2 995 aaKnown RBP11.65□□□□□ -0.54
RTF1-202ENST00000462276 HACE1Q8IYU2 909 aa11.65□□□□□ -0.54
RTF1-202ENST00000462276 GPD1LQ8N335 351 aa11.65□□□□□ -0.54
RTF1-202ENST00000462276 APBB2Q92870 758 aa11.65□□□□□ -0.54
RTF1-202ENST00000462276 TSPAN18Q96SJ8 248 aa11.65□□□□□ -0.54
RTF1-202ENST00000462276 MSTO1Q9BUK6 570 aa11.65□□□□□ -0.54
RTF1-202ENST00000462276 NOC4LQ9BVI4 516 aaKnown RBP11.65□□□□□ -0.54
RTF1-202ENST00000462276 FTHL17Q9BXU8 183 aa11.65□□□□□ -0.54
RTF1-202ENST00000462276 HIPK3Q9H422 1215 aa11.65□□□□□ -0.54
RTF1-202ENST00000462276 TMEM39AQ9NV64 488 aa11.65□□□□□ -0.54
RTF1-202ENST00000462276 HSPBP1Q9NZL4 362 aa11.65□□□□□ -0.54
RTF1-202ENST00000462276 ARMCX3Q9UH62 379 aaPredicted RBP11.65□□□□□ -0.54
RTF1-202ENST00000462276 AGO2Q9UKV8 859 aaKnown RBP11.65□□□□□ -0.54
RTF1-202ENST00000462276 TBX21Q9UL17 535 aa11.65□□□□□ -0.54
RTF1-202ENST00000462276 NOC2LQ9Y3T9 749 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms