RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 MGAT2Q10469 447 aa3.97□□□□□ -1.77
VCL-203ENST00000461383 TMEM200BQ69YZ2 307 aa3.97□□□□□ -1.77
VCL-203ENST00000461383 DARS2Q6PI48 645 aaKnown RBP3.97□□□□□ -1.77
VCL-203ENST00000461383 CHST15Q7LFX5 561 aaPredicted RBP3.97□□□□□ -1.77
VCL-203ENST00000461383 OVCH2Q7RTZ1 564 aa3.97□□□□□ -1.77
VCL-203ENST00000461383 C11orf96Q7Z7L8 435 aa3.97□□□□□ -1.77
VCL-203ENST00000461383 TTC7BQ86TV6 843 aa3.97□□□□□ -1.77
VCL-203ENST00000461383 RSPH3Q86UC2 560 aa3.97□□□□□ -1.77
VCL-203ENST00000461383 IGDCC3Q8IVU1 814 aa3.97□□□□□ -1.77
VCL-203ENST00000461383 PRR18Q8N4B5 295 aa3.97□□□□□ -1.77
VCL-203ENST00000461383 FAM156AQ8NDB6 213 aa3.97□□□□□ -1.77
VCL-203ENST00000461383 KCNN1Q92952 543 aa3.97□□□□□ -1.77
VCL-203ENST00000461383 NOX5Q96PH1 765 aa3.97□□□□□ -1.77
VCL-203ENST00000461383 CGRRF1Q99675 332 aa3.97□□□□□ -1.77
VCL-203ENST00000461383 FDXACB1Q9BRP7 624 aaPredicted RBP3.97□□□□□ -1.77
VCL-203ENST00000461383 KRTAP4-5Q9BYR2 181 aa3.97□□□□□ -1.77
VCL-203ENST00000461383 OSBPL6Q9BZF3 934 aa3.97□□□□□ -1.77
VCL-203ENST00000461383 MANSC1Q9H8J5 431 aa3.97□□□□□ -1.77
VCL-203ENST00000461383 TDP1Q9NUW8 608 aa3.97□□□□□ -1.77
VCL-203ENST00000461383 IPPQ9Y573 584 aa3.97□□□□□ -1.77
VCL-203ENST00000461383 NCANO14594 1321 aa3.96□□□□□ -1.77
VCL-203ENST00000461383 A0A0A6YYK5 440 aaPredicted RBP3.96□□□□□ -1.78
VCL-203ENST00000461383 LOC102724159A0A0B4J2E5 919 aa3.96□□□□□ -1.78
VCL-203ENST00000461383 CAPN8A6NHC0 703 aa3.96□□□□□ -1.78
VCL-203ENST00000461383 MGEA5O60502 916 aa3.96□□□□□ -1.78
VCL-203ENST00000461383 PQBP1O60828 265 aaKnown RBP3.96□□□□□ -1.78
VCL-203ENST00000461383 TUSC2O75896 110 aa3.96□□□□□ -1.78
VCL-203ENST00000461383 LY86O95711 162 aa3.96□□□□□ -1.78
VCL-203ENST00000461383 KNG1P01042 644 aa3.96□□□□□ -1.78
VCL-203ENST00000461383 CYP1A1P04798 512 aaPredicted RBP3.96□□□□□ -1.78
VCL-203ENST00000461383 ALDH2P05091 517 aa3.96□□□□□ -1.78
VCL-203ENST00000461383 MYL3P08590 195 aa3.96□□□□□ -1.78
VCL-203ENST00000461383 LTA4HP09960 611 aaKnown RBP3.96□□□□□ -1.78
VCL-203ENST00000461383 HNRNPLP14866 589 aaKnown RBP eCLIP3.96□□□□□ -1.78
VCL-203ENST00000461383 EDNRBP24530 442 aa3.96□□□□□ -1.78
VCL-203ENST00000461383 IGFBP6P24592 240 aaPredicted RBP3.96□□□□□ -1.78
VCL-203ENST00000461383 CTSSP25774 331 aa3.96□□□□□ -1.78
VCL-203ENST00000461383 POLD1P28340 1107 aa3.96□□□□□ -1.78
VCL-203ENST00000461383 WASP42768 502 aa3.96□□□□□ -1.78
VCL-203ENST00000461383 USP14P54578 494 aa3.96□□□□□ -1.78
VCL-203ENST00000461383 PWP2Q15269 919 aaKnown RBP3.96□□□□□ -1.78
VCL-203ENST00000461383 KCNA10Q16322 511 aa3.96□□□□□ -1.78
VCL-203ENST00000461383 ANO6Q4KMQ2 910 aa3.96□□□□□ -1.78
VCL-203ENST00000461383 NPNTQ6UXI9 565 aa3.96□□□□□ -1.78
VCL-203ENST00000461383 ACRBPQ8NEB7 543 aa3.96□□□□□ -1.78
VCL-203ENST00000461383 CCHCR1Q8TD31 782 aa3.96□□□□□ -1.78
VCL-203ENST00000461383 PARD3BQ8TEW8 1205 aa3.96□□□□□ -1.78
VCL-203ENST00000461383 GCDHQ92947 438 aaPredicted RBP3.96□□□□□ -1.78
VCL-203ENST00000461383 GFM2Q969S9 779 aaKnown RBP3.96□□□□□ -1.78
VCL-203ENST00000461383 MTFMTQ96DP5 389 aaKnown RBP3.96□□□□□ -1.78
VCL-203ENST00000461383 CDK5RAP3Q96JB5 506 aa3.96□□□□□ -1.78
VCL-203ENST00000461383 ELAC2Q9BQ52 826 aaKnown RBP3.96□□□□□ -1.78
VCL-203ENST00000461383 SOX7Q9BT81 388 aa3.96□□□□□ -1.78
VCL-203ENST00000461383 B3GNT5Q9BYG0 378 aa3.96□□□□□ -1.78
VCL-203ENST00000461383 KRTAP9-3Q9BYQ3 159 aa3.96□□□□□ -1.78
VCL-203ENST00000461383 HAPLN2Q9GZV7 340 aa3.96□□□□□ -1.78
VCL-203ENST00000461383 TMEM60Q9H2L4 133 aa3.96□□□□□ -1.78
VCL-203ENST00000461383 KCNK12Q9HB15 430 aa3.96□□□□□ -1.78
VCL-203ENST00000461383 SCOCQ9UIL1 159 aa3.96□□□□□ -1.78
VCL-203ENST00000461383 STXBP5LQ9Y2K9 1186 aa3.96□□□□□ -1.78
VCL-203ENST00000461383 PCDHGB6Q9Y5F9 930 aa3.96□□□□□ -1.78
VCL-203ENST00000461383 NR2E3Q9Y5X4 410 aa3.96□□□□□ -1.78
VCL-203ENST00000461383 IRAK3Q9Y616 596 aa3.96□□□□□ -1.78
VCL-203ENST00000461383 CFAP69A5D8W1 941 aa3.95□□□□□ -1.78
VCL-203ENST00000461383 A6NNZ2 444 aa3.95□□□□□ -1.78
VCL-203ENST00000461383 GOLIM4O00461 696 aa3.95□□□□□ -1.78
VCL-203ENST00000461383 SLC16A6O15403 523 aa3.95□□□□□ -1.78
VCL-203ENST00000461383 TMEM127O75204 238 aa3.95□□□□□ -1.78
VCL-203ENST00000461383 IL13P35225 146 aa3.95□□□□□ -1.78
VCL-203ENST00000461383 RRADP55042 308 aa3.95□□□□□ -1.78
VCL-203ENST00000461383 MLLT6P55198 1093 aaPredicted RBP3.95□□□□□ -1.78
VCL-203ENST00000461383 DLG4P78352 724 aa3.95□□□□□ -1.78
VCL-203ENST00000461383 PPP3CAQ08209 521 aa3.95□□□□□ -1.78
VCL-203ENST00000461383 ADAM15Q13444 863 aa3.95□□□□□ -1.78
VCL-203ENST00000461383 GALEQ14376 348 aa3.95□□□□□ -1.78
VCL-203ENST00000461383 RTP5Q14D33 572 aa3.95□□□□□ -1.78
VCL-203ENST00000461383 LONRF1Q17RB8 773 aa3.95□□□□□ -1.78
VCL-203ENST00000461383 LONRF3Q496Y0 759 aa3.95□□□□□ -1.78
VCL-203ENST00000461383 RNF220Q5VTB9 566 aa3.95□□□□□ -1.78
VCL-203ENST00000461383 KRT40Q6A162 431 aa3.95□□□□□ -1.78
VCL-203ENST00000461383 ABHD15Q6UXT9 468 aa3.95□□□□□ -1.78
VCL-203ENST00000461383 GADL1Q6ZQY3 521 aa3.95□□□□□ -1.78
VCL-203ENST00000461383 SMC5Q8IY18 1101 aa3.95□□□□□ -1.78
VCL-203ENST00000461383 UNC5BQ8IZJ1 945 aa3.95□□□□□ -1.78
VCL-203ENST00000461383 FAM43AQ8N2R8 423 aa3.95□□□□□ -1.78
VCL-203ENST00000461383 PQLC1Q8N2U9 271 aa3.95□□□□□ -1.78
VCL-203ENST00000461383 LINC00482Q8N8I6 264 aa3.95□□□□□ -1.78
VCL-203ENST00000461383 C3orf20Q8ND61 904 aa3.95□□□□□ -1.78
VCL-203ENST00000461383 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.95□□□□□ -1.78
VCL-203ENST00000461383 KLHDC4Q8TBB5 520 aa3.95□□□□□ -1.78
VCL-203ENST00000461383 ZNF480Q8WV37 535 aa3.95□□□□□ -1.78
VCL-203ENST00000461383 SNX33Q8WV41 574 aa3.95□□□□□ -1.78
VCL-203ENST00000461383 RAB24Q969Q5 203 aa3.95□□□□□ -1.78
VCL-203ENST00000461383 TMX3Q96JJ7 454 aa3.95□□□□□ -1.78
VCL-203ENST00000461383 CLPTM1LQ96KA5 538 aa3.95□□□□□ -1.78
VCL-203ENST00000461383 SIGLEC10Q96LC7 697 aa3.95□□□□□ -1.78
VCL-203ENST00000461383 SENP6Q9GZR1 1112 aaPredicted RBP3.95□□□□□ -1.78
VCL-203ENST00000461383 C14orf93Q9H972 538 aaKnown RBP3.95□□□□□ -1.78
VCL-203ENST00000461383 ARMT1Q9H993 441 aa3.95□□□□□ -1.78
VCL-203ENST00000461383 DDX21Q9NR30 783 aaKnown RBP eCLIP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms