RNA–Protein interactions for RNA: ENST00000461283.5

RBM39-221, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 2,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-221ENST00000461283 SMARCA1P28370 1054 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 FNTAP49354 379 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 MRPL12P52815 198 aaKnown RBP3.5□□□□□ -1.85
RBM39-221ENST00000461283 U2AF1Q01081 240 aaKnown RBP eCLIP3.5□□□□□ -1.853e-7■□□□□ 9.7
RBM39-221ENST00000461283 TNP2Q05952 138 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 CRYMQ14894 314 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 TMEM177Q53S58 311 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 NOL9Q5SY16 702 aaKnown RBP3.5□□□□□ -1.85
RBM39-221ENST00000461283 MZT2AQ6P582 158 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 RUFY3Q7L099 469 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 ARHGEF25Q86VW2 580 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 CCDC150Q8NCX0 1101 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 CTCFLQ8NI51 663 aaPredicted RBP3.5□□□□□ -1.85
RBM39-221ENST00000461283 FAM71BQ8TC56 605 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 ZNF483Q8TF39 744 aaPredicted RBP3.5□□□□□ -1.85
RBM39-221ENST00000461283 NUDT8Q8WV74 236 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 KCTD13Q8WZ19 329 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 THOC1Q96FV9 657 aaKnown RBP3.5□□□□□ -1.85
RBM39-221ENST00000461283 TTC14Q96N46 770 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 MCMBPQ9BTE3 642 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 LRFN3Q9BTN0 628 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 TRIM6Q9C030 488 aaPredicted RBP3.5□□□□□ -1.85
RBM39-221ENST00000461283 UBE2OQ9C0C9 1292 aaKnown RBP3.5□□□□□ -1.85
RBM39-221ENST00000461283 ADAM19Q9H013 955 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 RIC8AQ9NPQ8 531 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 PLA2G2EQ9NZK7 142 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 TUBD1Q9UJT1 453 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 FAM169AQ9Y6X4 670 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 SOS1Q07889 1333 aaPredicted RBP3.5□□□□□ -1.85
RBM39-221ENST00000461283 MAP3K19Q56UN5 1328 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 CNTNAP1P78357 1384 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 NFAT5O94916 1531 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.5□□□□□ -1.85
RBM39-221ENST00000461283 TTLL8A6PVC2 850 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 GOLGA6L19H0YKK7 550 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 GPR25O00155 361 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 EIF3FO00303 357 aaPredicted RBP3.5□□□□□ -1.85
RBM39-221ENST00000461283 EFCAB14O75071 495 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 PPM1BO75688 479 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 SMNDC1O75940 238 aaKnown RBP eCLIP3.5□□□□□ -1.858e-11■■■□□ 15.9
RBM39-221ENST00000461283 CAVIN2O95810 425 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 CKMP06732 381 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 YBX3P16989 372 aaKnown RBP eCLIP3.5□□□□□ -1.85
RBM39-221ENST00000461283 KIF23Q02241 960 aaPredicted RBP3.5□□□□□ -1.85
RBM39-221ENST00000461283 PDE4BQ07343 736 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 ST3GAL1Q11201 340 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 SEMA5AQ13591 1074 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 TIGD6Q17RP2 521 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 FAM209BQ5JX69 171 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 CREB3L3Q68CJ9 461 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 FAM173BQ6P4H8 233 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 TRIM67Q6ZTA4 783 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 CYFIP1Q7L576 1253 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 DDX53Q86TM3 631 aaKnown RBP3.5□□□□□ -1.85
RBM39-221ENST00000461283 C11orf74Q86VG3 221 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 MCATQ8IVS2 390 aaKnown RBP3.5□□□□□ -1.85
RBM39-221ENST00000461283 ANKRD44Q8N8A2 993 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 GOLGA1Q92805 767 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 TRIM63Q969Q1 353 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 PGBD4Q96DM1 585 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 KCNJ15Q99712 375 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 CORO1BQ9BR76 489 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 MCOLN1Q9GZU1 580 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 IL25Q9H293 177 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 FAM204AQ9H8W3 233 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 SUGCTQ9HAC7 445 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 GP6Q9HCN6 339 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 KMT5AQ9NQR1 393 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 C1orf112Q9NSG2 853 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 DNAJC28Q9NX36 388 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 TFCP2L1Q9NZI6 479 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 IMPACTQ9P2X3 320 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 STAP2Q9UGK3 403 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 SMC3Q9UQE7 1217 aa3.5□□□□□ -1.85
RBM39-221ENST00000461283 GPC6Q9Y625 555 aaPredicted RBP3.5□□□□□ -1.85
RBM39-221ENST00000461283 KDM6AO15550 1401 aaPredicted RBP3.5□□□□□ -1.85
RBM39-221ENST00000461283 COL3A1P02461 1466 aaPredicted RBP3.49□□□□□ -1.85
RBM39-221ENST00000461283 MON2Q7Z3U7 1717 aa3.49□□□□□ -1.85
RBM39-221ENST00000461283 BRCA1P38398 1863 aaKnown RBP3.49□□□□□ -1.85
RBM39-221ENST00000461283 A0A087WWV3 80 aa3.49□□□□□ -1.85
RBM39-221ENST00000461283 VWA3AA6NCI4 1184 aa3.49□□□□□ -1.85
RBM39-221ENST00000461283 LINC01387J3KSC0 135 aa3.49□□□□□ -1.85
RBM39-221ENST00000461283 MYO1FO00160 1098 aa3.49□□□□□ -1.85
RBM39-221ENST00000461283 GDF9O60383 454 aa3.49□□□□□ -1.85
RBM39-221ENST00000461283 TLR5O60602 858 aa3.49□□□□□ -1.85
RBM39-221ENST00000461283 SHOX2O60902 331 aaPredicted RBP3.49□□□□□ -1.85
RBM39-221ENST00000461283 LRRN2O75325 713 aa3.49□□□□□ -1.85
RBM39-221ENST00000461283 PRPF6O94906 941 aaKnown RBP3.49□□□□□ -1.85
RBM39-221ENST00000461283 CFBP00751 764 aa3.49□□□□□ -1.85
RBM39-221ENST00000461283 F11P03951 625 aa3.49□□□□□ -1.85
RBM39-221ENST00000461283 PTPRAP18433 802 aa3.49□□□□□ -1.85
RBM39-221ENST00000461283 KRT15P19012 456 aa3.49□□□□□ -1.85
RBM39-221ENST00000461283 GJB2P29033 226 aa3.49□□□□□ -1.85
RBM39-221ENST00000461283 NTF4P34130 210 aa3.49□□□□□ -1.85
RBM39-221ENST00000461283 HSPA4P34932 840 aa3.49□□□□□ -1.85
RBM39-221ENST00000461283 NF2P35240 595 aa3.49□□□□□ -1.85
RBM39-221ENST00000461283 PDE1AP54750 535 aa3.49□□□□□ -1.85
RBM39-221ENST00000461283 KRT85P78386 507 aa3.49□□□□□ -1.85
RBM39-221ENST00000461283 ICA1Q05084 483 aa3.49□□□□□ -1.85
RBM39-221ENST00000461283 GALNT1Q10472 559 aaPredicted RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms