RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 ACO2Q99798 780 aaKnown RBP11.15□□□□□ -0.62
UPF2-204ENST00000460569 GBP3Q9H0R5 595 aa11.15□□□□□ -0.62
UPF2-204ENST00000460569 PDZD7Q9H5P4 517 aa11.15□□□□□ -0.62
UPF2-204ENST00000460569 IL23AQ9NPF7 189 aa11.15□□□□□ -0.62
UPF2-204ENST00000460569 ANO10Q9NW15 660 aa11.15□□□□□ -0.62
UPF2-204ENST00000460569 DACH1Q9UI36 760 aa11.15□□□□□ -0.62
UPF2-204ENST00000460569 CTNND2Q9UQB3 1225 aa11.15□□□□□ -0.62
UPF2-204ENST00000460569 PPP1R3GB7ZBB8 358 aa11.14□□□□□ -0.63
UPF2-204ENST00000460569 TISP43B9A030 160 aa11.14□□□□□ -0.63
UPF2-204ENST00000460569 ANKRD63C9JTQ0 380 aa11.14□□□□□ -0.63
UPF2-204ENST00000460569 MGEA5O60502 916 aa11.14□□□□□ -0.63
UPF2-204ENST00000460569 TOM1L1O75674 476 aa11.14□□□□□ -0.63
UPF2-204ENST00000460569 PFKMP08237 780 aa11.14□□□□□ -0.63
UPF2-204ENST00000460569 CCDC192P0DO97 292 aa11.14□□□□□ -0.63
UPF2-204ENST00000460569 ACRP10323 421 aa11.14□□□□□ -0.63
UPF2-204ENST00000460569 HARSP12081 509 aaKnown RBP11.14□□□□□ -0.63
UPF2-204ENST00000460569 IBSPP21815 317 aaPredicted RBP11.14□□□□□ -0.63
UPF2-204ENST00000460569 HOXA11P31270 313 aaPredicted RBP11.14□□□□□ -0.63
UPF2-204ENST00000460569 PAK1Q13153 545 aa11.14□□□□□ -0.63
UPF2-204ENST00000460569 TCTN1Q2MV58 587 aa11.14□□□□□ -0.63
UPF2-204ENST00000460569 ARMCX5Q6P1M9 558 aa11.14□□□□□ -0.63
UPF2-204ENST00000460569 SLC39A4Q6P5W5 647 aa11.14□□□□□ -0.63
UPF2-204ENST00000460569 SLC27A1Q6PCB7 646 aa11.14□□□□□ -0.63
UPF2-204ENST00000460569 MPZL3Q6UWV2 235 aa11.14□□□□□ -0.63
UPF2-204ENST00000460569 HS2ST1Q7LGA3 356 aa11.14□□□□□ -0.63
UPF2-204ENST00000460569 ZBTB33Q86T24 672 aa11.14□□□□□ -0.63
UPF2-204ENST00000460569 CCDC51Q96ER9 411 aa11.14□□□□□ -0.63
UPF2-204ENST00000460569 ZBTB45Q96K62 511 aaPredicted RBP11.14□□□□□ -0.63
UPF2-204ENST00000460569 ADAM2Q99965 735 aa11.14□□□□□ -0.63
UPF2-204ENST00000460569 ADPGKQ9BRR6 497 aa11.14□□□□□ -0.63
UPF2-204ENST00000460569 TCHPQ9BT92 498 aa11.14□□□□□ -0.63
UPF2-204ENST00000460569 FTHL17Q9BXU8 183 aa11.14□□□□□ -0.63
UPF2-204ENST00000460569 TMX1Q9H3N1 280 aa11.14□□□□□ -0.63
UPF2-204ENST00000460569 CHST12Q9NRB3 414 aa11.14□□□□□ -0.63
UPF2-204ENST00000460569 TYW1Q9NV66 732 aaKnown RBP11.14□□□□□ -0.63
UPF2-204ENST00000460569 TNFSF13BQ9Y275 285 aa11.14□□□□□ -0.63
UPF2-204ENST00000460569 MKI67P46013 3256 aaKnown RBP11.13□□□□□ -0.63
UPF2-204ENST00000460569 RALGAPA2Q2PPJ7 1873 aa11.13□□□□□ -0.63
UPF2-204ENST00000460569 A0A1B0GUA9 196 aa11.13□□□□□ -0.63
UPF2-204ENST00000460569 CLIC2O15247 247 aa11.13□□□□□ -0.63
UPF2-204ENST00000460569 CLDN3O15551 220 aa11.13□□□□□ -0.63
UPF2-204ENST00000460569 TGFB1I1O43294 461 aa11.13□□□□□ -0.63
UPF2-204ENST00000460569 NPTXRO95502 500 aa11.13□□□□□ -0.63
UPF2-204ENST00000460569 ACTN1P12814 892 aa11.13□□□□□ -0.63
UPF2-204ENST00000460569 CCNE1P24864 410 aa11.13□□□□□ -0.63
UPF2-204ENST00000460569 RGS19P49795 217 aa11.13□□□□□ -0.63
UPF2-204ENST00000460569 DSC3Q14574 896 aa11.13□□□□□ -0.63
UPF2-204ENST00000460569 NOLC1Q14978 699 aaKnown RBP eCLIP11.13□□□□□ -0.63
UPF2-204ENST00000460569 C11orf57Q6ZUT1 292 aaPredicted RBP11.13□□□□□ -0.63
UPF2-204ENST00000460569 APBB1IPQ7Z5R6 666 aaPredicted RBP11.13□□□□□ -0.63
UPF2-204ENST00000460569 GOLGA5Q8TBA6 731 aa11.13□□□□□ -0.63
UPF2-204ENST00000460569 NOC3LQ8WTT2 800 aaKnown RBP11.13□□□□□ -0.63
UPF2-204ENST00000460569 NELFBQ8WX92 580 aa11.13□□□□□ -0.63
UPF2-204ENST00000460569 LINC01599Q8WXQ3 324 aa11.13□□□□□ -0.63
UPF2-204ENST00000460569 POMGNT1Q8WZA1 660 aa11.13□□□□□ -0.63
UPF2-204ENST00000460569 P2RX5Q93086 422 aa11.13□□□□□ -0.63
UPF2-204ENST00000460569 VWCEQ96DN2 955 aa11.13□□□□□ -0.63
UPF2-204ENST00000460569 DHTKD1Q96HY7 919 aaPredicted RBP11.13□□□□□ -0.63
UPF2-204ENST00000460569 TSG101Q99816 390 aa11.13□□□□□ -0.63
UPF2-204ENST00000460569 EIF2AQ9BY44 585 aaKnown RBP11.13□□□□□ -0.63
UPF2-204ENST00000460569 TRIM6Q9C030 488 aaPredicted RBP11.13□□□□□ -0.63
UPF2-204ENST00000460569 CDT1Q9H211 546 aa11.13□□□□□ -0.63
UPF2-204ENST00000460569 KCTD10Q9H3F6 313 aa11.13□□□□□ -0.63
UPF2-204ENST00000460569 AGPAT3Q9NRZ7 376 aa11.13□□□□□ -0.63
UPF2-204ENST00000460569 CEP290O15078 2479 aa11.12□□□□□ -0.63
UPF2-204ENST00000460569 PTPRSQ13332 1948 aa11.12□□□□□ -0.63
UPF2-204ENST00000460569 TRIM49BA6NDI0 452 aa11.12□□□□□ -0.63
UPF2-204ENST00000460569 PDXKO00764 312 aa11.12□□□□□ -0.63
UPF2-204ENST00000460569 CALUO43852 315 aaPredicted RBP11.12□□□□□ -0.63
UPF2-204ENST00000460569 MCF2P10911 925 aa11.12□□□□□ -0.63
UPF2-204ENST00000460569 PROZP22891 400 aa11.12□□□□□ -0.63
UPF2-204ENST00000460569 MAGEA10P43363 369 aaPredicted RBP11.12□□□□□ -0.63
UPF2-204ENST00000460569 RAB27AP51159 221 aa11.12□□□□□ -0.63
UPF2-204ENST00000460569 CYP2J2P51589 502 aa11.12□□□□□ -0.63
UPF2-204ENST00000460569 STX17P56962 302 aa11.12□□□□□ -0.63
UPF2-204ENST00000460569 SNRPFP62306 86 aaKnown RBP11.12□□□□□ -0.63
UPF2-204ENST00000460569 MCL1Q07820 350 aa11.12□□□□□ -0.63
UPF2-204ENST00000460569 IKBKEQ14164 716 aa11.12□□□□□ -0.63
UPF2-204ENST00000460569 DCAF4L1Q3SXM0 396 aa11.12□□□□□ -0.63
UPF2-204ENST00000460569 ANO6Q4KMQ2 910 aa11.12□□□□□ -0.63
UPF2-204ENST00000460569 ZCWPW2Q504Y3 356 aa11.12□□□□□ -0.63
UPF2-204ENST00000460569 UBXN11Q5T124 520 aa11.12□□□□□ -0.63
UPF2-204ENST00000460569 SLFN12LQ6IEE8 588 aa11.12□□□□□ -0.63
UPF2-204ENST00000460569 CENPPQ6IPU0 288 aa11.12□□□□□ -0.63
UPF2-204ENST00000460569 PSRC1Q6PGN9 363 aaPredicted RBP11.12□□□□□ -0.63
UPF2-204ENST00000460569 CBWD1Q9BRT8 395 aa11.12□□□□□ -0.63
UPF2-204ENST00000460569 FUCA2Q9BTY2 467 aa11.12□□□□□ -0.63
UPF2-204ENST00000460569 MSTO1Q9BUK6 570 aa11.12□□□□□ -0.63
UPF2-204ENST00000460569 DNAJC25Q9H1X3 360 aa11.12□□□□□ -0.63
UPF2-204ENST00000460569 TSPYL2Q9H2G4 693 aaPredicted RBP11.12□□□□□ -0.63
UPF2-204ENST00000460569 SEMA6BQ9H3T3 888 aa11.12□□□□□ -0.63
UPF2-204ENST00000460569 PCIF1Q9H4Z3 704 aa11.12□□□□□ -0.63
UPF2-204ENST00000460569 PTPRHQ9HD43 1115 aa11.12□□□□□ -0.63
UPF2-204ENST00000460569 FAM105AQ9NUU6 356 aa11.12□□□□□ -0.63
UPF2-204ENST00000460569 CGNQ9P2M7 1197 aaKnown RBP11.12□□□□□ -0.63
UPF2-204ENST00000460569 CITO14578 2027 aa11.12□□□□□ -0.63
UPF2-204ENST00000460569 PDE4DIPQ5VU43 2346 aa11.11□□□□□ -0.63
UPF2-204ENST00000460569 A0A0B4J269 797 aa11.11□□□□□ -0.63
UPF2-204ENST00000460569 BICDL2A1A5D9 508 aa11.11□□□□□ -0.63
UPF2-204ENST00000460569 ZBBXA8MT70 800 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms