RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 MEF2AQ02078 507 aaPredicted RBP6.19□□□□□ -1.42
VBP1-202ENST00000460509 HGFACQ04756 655 aa6.19□□□□□ -1.42
VBP1-202ENST00000460509 DUSP2Q05923 314 aa6.19□□□□□ -1.42
VBP1-202ENST00000460509 SURF1Q15526 300 aa6.19□□□□□ -1.42
VBP1-202ENST00000460509 COA7Q96BR5 231 aa6.19□□□□□ -1.42
VBP1-202ENST00000460509 PARD6AQ9NPB6 346 aa6.19□□□□□ -1.42
VBP1-202ENST00000460509 CHPF2Q9P2E5 772 aa6.19□□□□□ -1.42
VBP1-202ENST00000460509 SERPINB13Q9UIV8 391 aa6.19□□□□□ -1.42
VBP1-202ENST00000460509 A0A1W2PRX2 142 aa6.18□□□□□ -1.42
VBP1-202ENST00000460509 CCDC154A6NI56 674 aa6.18□□□□□ -1.42
VBP1-202ENST00000460509 SLC26A4O43511 780 aa6.18□□□□□ -1.42
VBP1-202ENST00000460509 CR2P20023 1033 aa6.18□□□□□ -1.42
VBP1-202ENST00000460509 CASRP41180 1078 aa6.18□□□□□ -1.42
VBP1-202ENST00000460509 ADKP55263 362 aaKnown RBP6.18□□□□□ -1.42
VBP1-202ENST00000460509 PPP3CAQ08209 521 aa6.18□□□□□ -1.42
VBP1-202ENST00000460509 NFYCQ13952 458 aa6.18□□□□□ -1.42
VBP1-202ENST00000460509 MIGA2Q7L4E1 593 aa6.18□□□□□ -1.42
VBP1-202ENST00000460509 CATIPQ7Z7H3 387 aa6.18□□□□□ -1.42
VBP1-202ENST00000460509 RHOT1Q8IXI2 618 aa6.18□□□□□ -1.42
VBP1-202ENST00000460509 GIMAP8Q8ND71 665 aaPredicted RBP6.18□□□□□ -1.42
VBP1-202ENST00000460509 SHCBP1Q8NEM2 672 aa6.18□□□□□ -1.42
VBP1-202ENST00000460509 FBXO18Q8NFZ0 1043 aa6.18□□□□□ -1.42
VBP1-202ENST00000460509 ARL8AQ96BM9 186 aa6.18□□□□□ -1.42
VBP1-202ENST00000460509 TMEM176AQ96HP8 235 aa6.18□□□□□ -1.42
VBP1-202ENST00000460509 GNRHR2Q96P88 292 aa6.18□□□□□ -1.42
VBP1-202ENST00000460509 C7orf25Q9BPX7 421 aa6.18□□□□□ -1.42
VBP1-202ENST00000460509 XYLT2Q9H1B5 865 aa6.18□□□□□ -1.42
VBP1-202ENST00000460509 SCOCQ9UIL1 159 aa6.18□□□□□ -1.42
VBP1-202ENST00000460509 LIMCH1Q9UPQ0 1083 aa6.18□□□□□ -1.42
VBP1-202ENST00000460509 PCDHA13Q9Y5I0 950 aa6.18□□□□□ -1.42
VBP1-202ENST00000460509 NPEPPSL1A6NEC2 478 aa6.17□□□□□ -1.42
VBP1-202ENST00000460509 CYP2C19P33261 490 aa6.17□□□□□ -1.42
VBP1-202ENST00000460509 PTPN7P35236 360 aa6.17□□□□□ -1.42
VBP1-202ENST00000460509 NPEPPSP55786 919 aa6.17□□□□□ -1.42
VBP1-202ENST00000460509 RIN1Q13671 783 aa6.17□□□□□ -1.42
VBP1-202ENST00000460509 C19orf54Q5BKX5 351 aa6.17□□□□□ -1.42
VBP1-202ENST00000460509 IFIT1BQ5T764 474 aaKnown RBP6.17□□□□□ -1.42
VBP1-202ENST00000460509 TAX1BP1Q86VP1 789 aa6.17□□□□□ -1.42
VBP1-202ENST00000460509 CMTM4Q8IZR5 234 aa6.17□□□□□ -1.42
VBP1-202ENST00000460509 MYO1HQ8N1T3 1032 aa6.17□□□□□ -1.42
VBP1-202ENST00000460509 CCHCR1Q8TD31 782 aa6.17□□□□□ -1.42
VBP1-202ENST00000460509 ZNF480Q8WV37 535 aa6.17□□□□□ -1.42
VBP1-202ENST00000460509 CFHR4Q92496 578 aa6.17□□□□□ -1.42
VBP1-202ENST00000460509 GPHA2Q96T91 129 aa6.17□□□□□ -1.42
VBP1-202ENST00000460509 CDC5LQ99459 802 aaKnown RBP6.17□□□□□ -1.42
VBP1-202ENST00000460509 LDAHQ9H6V9 325 aa6.17□□□□□ -1.42
VBP1-202ENST00000460509 TCF7L1Q9HCS4 588 aa6.17□□□□□ -1.42
VBP1-202ENST00000460509 PNMA8BQ9ULN7 279 aaPredicted RBP6.17□□□□□ -1.42
VBP1-202ENST00000460509 OAZ3Q9UMX2 235 aa6.17□□□□□ -1.42
VBP1-202ENST00000460509 UBE2QL1A1L167 161 aa6.16□□□□□ -1.42
VBP1-202ENST00000460509 FAM171A2A8MVW0 826 aa6.16□□□□□ -1.42
VBP1-202ENST00000460509 MATN2O00339 956 aa6.16□□□□□ -1.42
VBP1-202ENST00000460509 NRP1O14786 923 aa6.16□□□□□ -1.42
VBP1-202ENST00000460509 PRPF3O43395 683 aaKnown RBP6.16□□□□□ -1.42
VBP1-202ENST00000460509 HTRA2O43464 458 aaPredicted RBP6.16□□□□□ -1.42
VBP1-202ENST00000460509 ITGA10O75578 1167 aa6.16□□□□□ -1.42
VBP1-202ENST00000460509 RFPL1O75677 317 aa6.16□□□□□ -1.42
VBP1-202ENST00000460509 GYPEP15421 78 aa6.16□□□□□ -1.42
VBP1-202ENST00000460509 IL10RAQ13651 578 aa6.16□□□□□ -1.42
VBP1-202ENST00000460509 SAFB2Q14151 953 aaKnown RBP eCLIP6.16□□□□□ -1.42
VBP1-202ENST00000460509 SEPT2Q15019 361 aa6.16□□□□□ -1.42
VBP1-202ENST00000460509 MLC1Q15049 377 aa6.16□□□□□ -1.42
VBP1-202ENST00000460509 KRTAP19-4Q3LI73 84 aa6.16□□□□□ -1.42
VBP1-202ENST00000460509 GAGE13Q4V321 117 aa6.16□□□□□ -1.42
VBP1-202ENST00000460509 RRP12Q5JTH9 1297 aaKnown RBP6.16□□□□□ -1.42
VBP1-202ENST00000460509 FRMD5Q7Z6J6 570 aa6.16□□□□□ -1.42
VBP1-202ENST00000460509 PQLC1Q8N2U9 271 aa6.16□□□□□ -1.42
VBP1-202ENST00000460509 OR2I1PQ8NGU4 316 aa6.16□□□□□ -1.42
VBP1-202ENST00000460509 MDM1Q8TC05 714 aa6.16□□□□□ -1.42
VBP1-202ENST00000460509 RABGGTAQ92696 567 aa6.16□□□□□ -1.42
VBP1-202ENST00000460509 RAB24Q969Q5 203 aa6.16□□□□□ -1.42
VBP1-202ENST00000460509 HDAC10Q969S8 669 aa6.16□□□□□ -1.42
VBP1-202ENST00000460509 CLIP3Q96DZ5 547 aa6.16□□□□□ -1.42
VBP1-202ENST00000460509 OR14A2Q96R54 314 aa6.16□□□□□ -1.42
VBP1-202ENST00000460509 KRTAP4-5Q9BYR2 181 aa6.16□□□□□ -1.42
VBP1-202ENST00000460509 SEC61A2Q9H9S3 476 aa6.16□□□□□ -1.42
VBP1-202ENST00000460509 IL23AQ9NPF7 189 aa6.16□□□□□ -1.42
VBP1-202ENST00000460509 GPRC5DQ9NZD1 345 aa6.16□□□□□ -1.42
VBP1-202ENST00000460509 ADCY6O43306 1168 aa6.15□□□□□ -1.42
VBP1-202ENST00000460509 AP1G1O43747 822 aa6.15□□□□□ -1.42
VBP1-202ENST00000460509 PRICKLE3O43900 615 aaPredicted RBP6.15□□□□□ -1.42
VBP1-202ENST00000460509 ENDOD1O94919 500 aa6.15□□□□□ -1.42
VBP1-202ENST00000460509 INHBBP09529 407 aa6.15□□□□□ -1.42
VBP1-202ENST00000460509 ATF3P18847 181 aa6.15□□□□□ -1.42
VBP1-202ENST00000460509 PDCP20941 246 aa6.15□□□□□ -1.42
VBP1-202ENST00000460509 WNT3AP56704 352 aa6.15□□□□□ -1.42
VBP1-202ENST00000460509 MGAT2Q10469 447 aa6.15□□□□□ -1.42
VBP1-202ENST00000460509 MST1LQ2TV78 715 aa6.15□□□□□ -1.42
VBP1-202ENST00000460509 C3orf36Q3SXR2 165 aa6.15□□□□□ -1.42
VBP1-202ENST00000460509 TBC1D10BQ4KMP7 808 aaPredicted RBP6.15□□□□□ -1.42
VBP1-202ENST00000460509 FAM102BQ5T8I3 360 aa6.15□□□□□ -1.42
VBP1-202ENST00000460509 SLFN13Q68D06 897 aa6.15□□□□□ -1.42
VBP1-202ENST00000460509 GLB1LQ6UWU2 654 aa6.15□□□□□ -1.42
VBP1-202ENST00000460509 Q6ZVL8 140 aa6.15□□□□□ -1.42
VBP1-202ENST00000460509 LIMS2Q7Z4I7 341 aa6.15□□□□□ -1.42
VBP1-202ENST00000460509 C14orf80Q86SX3 495 aa6.15□□□□□ -1.42
VBP1-202ENST00000460509 GRAMD1CQ8IYS0 662 aa6.15□□□□□ -1.42
VBP1-202ENST00000460509 REPS2Q8NFH8 660 aa6.15□□□□□ -1.42
VBP1-202ENST00000460509 STON2Q8WXE9 905 aa6.15□□□□□ -1.42
VBP1-202ENST00000460509 KAT5Q92993 513 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms