RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 PPP1R16BQ96T49 567 aa12.08□□□□□ -0.48
SMNDC1-203ENST00000460483 GBP3Q9H0R5 595 aa12.08□□□□□ -0.48
SMNDC1-203ENST00000460483 KIAA1586Q9HCI6 787 aa12.08□□□□□ -0.48
SMNDC1-203ENST00000460483 SLC39A2Q9NP94 309 aa12.08□□□□□ -0.48
SMNDC1-203ENST00000460483 IL23AQ9NPF7 189 aa12.08□□□□□ -0.48
SMNDC1-203ENST00000460483 UBN1Q9NPG3 1134 aa12.08□□□□□ -0.48
SMNDC1-203ENST00000460483 AGPAT5Q9NUQ2 364 aa12.08□□□□□ -0.48
SMNDC1-203ENST00000460483 TBC1D7Q9P0N9 293 aa12.08□□□□□ -0.48
SMNDC1-203ENST00000460483 ST3GAL5Q9UNP4 418 aa12.08□□□□□ -0.48
SMNDC1-203ENST00000460483 PIN4Q9Y237 131 aaKnown RBP12.08□□□□□ -0.48
SMNDC1-203ENST00000460483 CNTNAP2Q9UHC6 1331 aa12.08□□□□□ -0.48
SMNDC1-203ENST00000460483 TRIM43BA6NCK2 446 aa12.07□□□□□ -0.48
SMNDC1-203ENST00000460483 PDXKO00764 312 aa12.07□□□□□ -0.48
SMNDC1-203ENST00000460483 HOXA2O43364 376 aa12.07□□□□□ -0.48
SMNDC1-203ENST00000460483 KLRC4O43908 158 aa12.07□□□□□ -0.48
SMNDC1-203ENST00000460483 FGBP02675 491 aa12.07□□□□□ -0.48
SMNDC1-203ENST00000460483 CXCL10P02778 98 aa12.07□□□□□ -0.48
SMNDC1-203ENST00000460483 STAG3L1P0CL83 205 aa12.07□□□□□ -0.48
SMNDC1-203ENST00000460483 POU5F1Q01860 360 aaKnown RBP12.07□□□□□ -0.48
SMNDC1-203ENST00000460483 MLLT1Q03111 559 aaPredicted RBP12.07□□□□□ -0.48
SMNDC1-203ENST00000460483 LRRC63Q05C16 580 aa12.07□□□□□ -0.48
SMNDC1-203ENST00000460483 MYBPC2Q14324 1141 aa12.07□□□□□ -0.48
SMNDC1-203ENST00000460483 LPIN1Q14693 890 aa12.07□□□□□ -0.48
SMNDC1-203ENST00000460483 STX1AQ16623 288 aa12.07□□□□□ -0.48
SMNDC1-203ENST00000460483 PLEKHG4Q58EX7 1191 aa12.07□□□□□ -0.48
SMNDC1-203ENST00000460483 TWF2Q6IBS0 349 aaKnown RBP12.07□□□□□ -0.48
SMNDC1-203ENST00000460483 SLC27A1Q6PCB7 646 aa12.07□□□□□ -0.48
SMNDC1-203ENST00000460483 FOXR2Q6PJQ5 311 aa12.07□□□□□ -0.48
SMNDC1-203ENST00000460483 RBM43Q6ZSC3 357 aaKnown RBP12.07□□□□□ -0.48
SMNDC1-203ENST00000460483 TRIM43Q96BQ3 446 aaPredicted RBP12.07□□□□□ -0.48
SMNDC1-203ENST00000460483 TRAIPQ9BWF2 469 aa12.07□□□□□ -0.48
SMNDC1-203ENST00000460483 MAN1B1Q9UKM7 699 aa12.07□□□□□ -0.48
SMNDC1-203ENST00000460483 TNFSF13BQ9Y275 285 aa12.07□□□□□ -0.48
SMNDC1-203ENST00000460483 NOC2LQ9Y3T9 749 aaKnown RBP12.07□□□□□ -0.48
SMNDC1-203ENST00000460483 A0A1B0GUA9 196 aa12.06□□□□□ -0.48
SMNDC1-203ENST00000460483 CARNS1A5YM72 827 aa12.06□□□□□ -0.48
SMNDC1-203ENST00000460483 TSPAN1O60635 241 aa12.06□□□□□ -0.48
SMNDC1-203ENST00000460483 PIGRP01833 764 aa12.06□□□□□ -0.48
SMNDC1-203ENST00000460483 AMHP03971 560 aa12.06□□□□□ -0.48
SMNDC1-203ENST00000460483 GARTP22102 1010 aa12.06□□□□□ -0.48
SMNDC1-203ENST00000460483 CASP1P29466 404 aa12.06□□□□□ -0.48
SMNDC1-203ENST00000460483 NMT1P30419 496 aaKnown RBP12.06□□□□□ -0.48
SMNDC1-203ENST00000460483 CD52P31358 61 aa12.06□□□□□ -0.48
SMNDC1-203ENST00000460483 KCNJ6P48051 423 aa12.06□□□□□ -0.48
SMNDC1-203ENST00000460483 YARSP54577 528 aaKnown RBP12.06□□□□□ -0.48
SMNDC1-203ENST00000460483 NLRP12P59046 1061 aa12.06□□□□□ -0.48
SMNDC1-203ENST00000460483 STK4Q13043 487 aa12.06□□□□□ -0.48
SMNDC1-203ENST00000460483 MORC3Q14149 939 aa12.06□□□□□ -0.48
SMNDC1-203ENST00000460483 ARSIQ5FYB1 569 aa12.06□□□□□ -0.48
SMNDC1-203ENST00000460483 MPZL3Q6UWV2 235 aa12.06□□□□□ -0.48
SMNDC1-203ENST00000460483 SLC24A5Q71RS6 500 aa12.06□□□□□ -0.48
SMNDC1-203ENST00000460483 FAM228AQ86W67 206 aa12.06□□□□□ -0.48
SMNDC1-203ENST00000460483 FBXO22Q8NEZ5 403 aa12.06□□□□□ -0.48
SMNDC1-203ENST00000460483 BSNDQ8WZ55 320 aa12.06□□□□□ -0.48
SMNDC1-203ENST00000460483 BADQ92934 168 aa12.06□□□□□ -0.48
SMNDC1-203ENST00000460483 WNT8BQ93098 351 aa12.06□□□□□ -0.48
SMNDC1-203ENST00000460483 CCDC113Q9H0I3 377 aa12.06□□□□□ -0.48
SMNDC1-203ENST00000460483 ERVK-5Q9HDB9 667 aa12.06□□□□□ -0.48
SMNDC1-203ENST00000460483 TOPORSQ9NS56 1045 aaPredicted RBP12.06□□□□□ -0.48
SMNDC1-203ENST00000460483 TYW1Q9NV66 732 aaKnown RBP12.06□□□□□ -0.48
SMNDC1-203ENST00000460483 LRFN2Q9ULH4 789 aa12.06□□□□□ -0.48
SMNDC1-203ENST00000460483 LOXHD1Q8IVV2 1947 aa12.05□□□□□ -0.48
SMNDC1-203ENST00000460483 FRMPD3Q5JV73 1810 aa12.05□□□□□ -0.48
SMNDC1-203ENST00000460483 PPP1R37O75864 691 aa12.05□□□□□ -0.48
SMNDC1-203ENST00000460483 EOMESO95936 686 aa12.05□□□□□ -0.48
SMNDC1-203ENST00000460483 MCF2P10911 925 aa12.05□□□□□ -0.48
SMNDC1-203ENST00000460483 CSF2RAP15509 400 aa12.05□□□□□ -0.48
SMNDC1-203ENST00000460483 ERCC5P28715 1186 aaPredicted RBP12.05□□□□□ -0.48
SMNDC1-203ENST00000460483 TPM4P67936 248 aa12.05□□□□□ -0.48
SMNDC1-203ENST00000460483 PAK1Q13153 545 aa12.05□□□□□ -0.48
SMNDC1-203ENST00000460483 TPD52L1Q16890 204 aaPredicted RBP12.05□□□□□ -0.48
SMNDC1-203ENST00000460483 ZNF568Q3ZCX4 644 aa12.05□□□□□ -0.48
SMNDC1-203ENST00000460483 ARMCX5Q6P1M9 558 aa12.05□□□□□ -0.48
SMNDC1-203ENST00000460483 EPM2AIP1Q7L775 607 aaPredicted RBP12.05□□□□□ -0.48
SMNDC1-203ENST00000460483 DEFB128Q7Z7B8 93 aa12.05□□□□□ -0.48
SMNDC1-203ENST00000460483 DBF4BQ8NFT6 615 aa12.05□□□□□ -0.48
SMNDC1-203ENST00000460483 TMEM174Q8WUU8 243 aa12.05□□□□□ -0.48
SMNDC1-203ENST00000460483 SCFD1Q8WVM8 642 aa12.05□□□□□ -0.48
SMNDC1-203ENST00000460483 POMGNT1Q8WZA1 660 aa12.05□□□□□ -0.48
SMNDC1-203ENST00000460483 SCLYQ96I15 445 aa12.05□□□□□ -0.48
SMNDC1-203ENST00000460483 ZNF668Q96K58 619 aaPredicted RBP12.05□□□□□ -0.48
SMNDC1-203ENST00000460483 TSPAN18Q96SJ8 248 aa12.05□□□□□ -0.48
SMNDC1-203ENST00000460483 ACO2Q99798 780 aaKnown RBP12.05□□□□□ -0.48
SMNDC1-203ENST00000460483 KIFC3Q9BVG8 833 aa12.05□□□□□ -0.48
SMNDC1-203ENST00000460483 CCDC94Q9BW85 323 aaPredicted RBP12.05□□□□□ -0.48
SMNDC1-203ENST00000460483 STRA6Q9BX79 667 aa12.05□□□□□ -0.48
SMNDC1-203ENST00000460483 WNT8AQ9H1J5 351 aa12.05□□□□□ -0.48
SMNDC1-203ENST00000460483 POLD4Q9HCU8 107 aa12.05□□□□□ -0.48
SMNDC1-203ENST00000460483 FRMD4BQ9Y2L6 1034 aa12.05□□□□□ -0.48
SMNDC1-203ENST00000460483 A0A0U1RQF3 1178 aa12.04□□□□□ -0.48
SMNDC1-203ENST00000460483 BIN1O00499 593 aa12.04□□□□□ -0.48
SMNDC1-203ENST00000460483 CETN3O15182 167 aa12.04□□□□□ -0.48
SMNDC1-203ENST00000460483 NBNO60934 754 aa12.04□□□□□ -0.48
SMNDC1-203ENST00000460483 ZNF623O75123 536 aa12.04□□□□□ -0.48
SMNDC1-203ENST00000460483 PRPF6O94906 941 aaKnown RBP12.04□□□□□ -0.48
SMNDC1-203ENST00000460483 GNA14O95837 355 aa12.04□□□□□ -0.48
SMNDC1-203ENST00000460483 MYBP10242 640 aa12.04□□□□□ -0.48
SMNDC1-203ENST00000460483 ARF4P18085 180 aaPredicted RBP12.04□□□□□ -0.48
SMNDC1-203ENST00000460483 FKBP3Q00688 224 aaKnown RBP12.04□□□□□ -0.48
SMNDC1-203ENST00000460483 NOLC1Q14978 699 aaKnown RBP eCLIP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms