RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 APOL6Q9BWW8 343 aa11.93□□□□□ -0.5
CCDC12-204ENST00000460035 MRPL4Q9BYD3 311 aaKnown RBP11.93□□□□□ -0.5
CCDC12-204ENST00000460035 PBX4Q9BYU1 374 aa11.93□□□□□ -0.5
CCDC12-204ENST00000460035 ST6GALNAC4Q9H4F1 302 aa11.93□□□□□ -0.5
CCDC12-204ENST00000460035 OLFML3Q9NRN5 406 aa11.93□□□□□ -0.5
CCDC12-204ENST00000460035 FAM105AQ9NUU6 356 aa11.93□□□□□ -0.5
CCDC12-204ENST00000460035 INSL6Q9Y581 213 aa11.93□□□□□ -0.5
CCDC12-204ENST00000460035 PCDHA11Q9Y5I1 949 aa11.93□□□□□ -0.5
CCDC12-204ENST00000460035 PVALEFA0A1B0GWK0 134 aa11.92□□□□□ -0.5
CCDC12-204ENST00000460035 GOLGA6L22H0YM25 854 aa11.92□□□□□ -0.5
CCDC12-204ENST00000460035 SOX1O00570 391 aaPredicted RBP11.92□□□□□ -0.5
CCDC12-204ENST00000460035 N4BP3O15049 544 aa11.92□□□□□ -0.5
CCDC12-204ENST00000460035 KINO60870 393 aaKnown RBP11.92□□□□□ -0.5
CCDC12-204ENST00000460035 NR1I2O75469 434 aa11.92□□□□□ -0.5
CCDC12-204ENST00000460035 GCNT3O95395 438 aa11.92□□□□□ -0.5
CCDC12-204ENST00000460035 EOMESO95936 686 aa11.92□□□□□ -0.5
CCDC12-204ENST00000460035 ABCD1P33897 745 aa11.92□□□□□ -0.5
CCDC12-204ENST00000460035 MATR3P43243 847 aaKnown RBP eCLIP11.92□□□□□ -0.5
CCDC12-204ENST00000460035 UBXN11Q5T124 520 aa11.92□□□□□ -0.5
CCDC12-204ENST00000460035 ATF7IP2Q5U623 682 aa11.92□□□□□ -0.5
CCDC12-204ENST00000460035 EEF1DP3Q658K8 133 aa11.92□□□□□ -0.5
CCDC12-204ENST00000460035 SLC27A1Q6PCB7 646 aa11.92□□□□□ -0.5
CCDC12-204ENST00000460035 UNC13DQ70J99 1090 aa11.92□□□□□ -0.5
CCDC12-204ENST00000460035 TAS1R3Q7RTX0 852 aa11.92□□□□□ -0.5
CCDC12-204ENST00000460035 ZBTB33Q86T24 672 aa11.92□□□□□ -0.5
CCDC12-204ENST00000460035 ABI1Q8IZP0 508 aa11.92□□□□□ -0.5
CCDC12-204ENST00000460035 LPPQ93052 612 aa11.92□□□□□ -0.5
CCDC12-204ENST00000460035 HPS3Q969F9 1004 aa11.92□□□□□ -0.5
CCDC12-204ENST00000460035 CCDC47Q96A33 483 aaKnown RBP11.92□□□□□ -0.5
CCDC12-204ENST00000460035 HVCN1Q96D96 273 aa11.92□□□□□ -0.5
CCDC12-204ENST00000460035 PGBD4Q96DM1 585 aa11.92□□□□□ -0.5
CCDC12-204ENST00000460035 TIGD1Q96MW7 591 aa11.92□□□□□ -0.5
CCDC12-204ENST00000460035 ADPGKQ9BRR6 497 aa11.92□□□□□ -0.5
CCDC12-204ENST00000460035 EIF2AQ9BY44 585 aaKnown RBP11.92□□□□□ -0.5
CCDC12-204ENST00000460035 NKX2-4Q9H2Z4 354 aa11.92□□□□□ -0.5
CCDC12-204ENST00000460035 ELAC1Q9H777 363 aaKnown RBP11.92□□□□□ -0.5
CCDC12-204ENST00000460035 TMEM161AQ9NX61 479 aa11.92□□□□□ -0.5
CCDC12-204ENST00000460035 HOOK1Q9UJC3 728 aaKnown RBP11.92□□□□□ -0.5
CCDC12-204ENST00000460035 TBX20Q9UMR3 447 aa11.92□□□□□ -0.5
CCDC12-204ENST00000460035 PCDHB13Q9Y5F0 798 aa11.92□□□□□ -0.5
CCDC12-204ENST00000460035 LAMA2P24043 3122 aaKnown RBP11.91□□□□□ -0.5
CCDC12-204ENST00000460035 PLXNA4Q9HCM2 1894 aa11.91□□□□□ -0.5
CCDC12-204ENST00000460035 TBKBP1A7MCY6 615 aa11.91□□□□□ -0.5
CCDC12-204ENST00000460035 ZNF623O75123 536 aa11.91□□□□□ -0.5
CCDC12-204ENST00000460035 PPP1R37O75864 691 aa11.91□□□□□ -0.5
CCDC12-204ENST00000460035 DGKIO75912 1065 aa11.91□□□□□ -0.5
CCDC12-204ENST00000460035 PRPF6O94906 941 aaKnown RBP11.91□□□□□ -0.5
CCDC12-204ENST00000460035 EDN1P05305 212 aa11.91□□□□□ -0.5
CCDC12-204ENST00000460035 PRR29P0C7W0 189 aa11.91□□□□□ -0.5
CCDC12-204ENST00000460035 MYBP10242 640 aa11.91□□□□□ -0.5
CCDC12-204ENST00000460035 FGFR1P11362 822 aa11.91□□□□□ -0.5
CCDC12-204ENST00000460035 ITGA4P13612 1032 aa11.91□□□□□ -0.5
CCDC12-204ENST00000460035 LIG4P49917 911 aa11.91□□□□□ -0.5
CCDC12-204ENST00000460035 GATMP50440 423 aa11.91□□□□□ -0.5
CCDC12-204ENST00000460035 HTRA4P83105 476 aaPredicted RBP11.91□□□□□ -0.5
CCDC12-204ENST00000460035 GTF2BQ00403 316 aa11.91□□□□□ -0.5
CCDC12-204ENST00000460035 EHHADHQ08426 723 aa11.91□□□□□ -0.5
CCDC12-204ENST00000460035 POSTNQ15063 836 aa11.91□□□□□ -0.5
CCDC12-204ENST00000460035 PAN2Q504Q3 1202 aaKnown RBP11.91□□□□□ -0.5
CCDC12-204ENST00000460035 APBB1IPQ7Z5R6 666 aaPredicted RBP11.91□□□□□ -0.5
CCDC12-204ENST00000460035 ZNF598Q86UK7 904 aaKnown RBP11.91□□□□□ -0.5
CCDC12-204ENST00000460035 HACE1Q8IYU2 909 aa11.91□□□□□ -0.5
CCDC12-204ENST00000460035 SYCP3Q8IZU3 236 aa11.91□□□□□ -0.5
CCDC12-204ENST00000460035 TIFAQ96CG3 184 aa11.91□□□□□ -0.5
CCDC12-204ENST00000460035 LRCH3Q96II8 777 aa11.91□□□□□ -0.5
CCDC12-204ENST00000460035 ZBTB45Q96K62 511 aaPredicted RBP11.91□□□□□ -0.5
CCDC12-204ENST00000460035 ACCSQ96QU6 501 aa11.91□□□□□ -0.5
CCDC12-204ENST00000460035 ACO2Q99798 780 aaKnown RBP11.91□□□□□ -0.5
CCDC12-204ENST00000460035 STRA6Q9BX79 667 aa11.91□□□□□ -0.5
CCDC12-204ENST00000460035 PDZD7Q9H5P4 517 aa11.91□□□□□ -0.5
CCDC12-204ENST00000460035 RC3H2Q9HBD1 1191 aaKnown RBP11.91□□□□□ -0.5
CCDC12-204ENST00000460035 EXOC1Q9NV70 894 aa11.91□□□□□ -0.5
CCDC12-204ENST00000460035 PARP2Q9UGN5 583 aa11.91□□□□□ -0.5
CCDC12-204ENST00000460035 EXOC7Q9UPT5 735 aa11.91□□□□□ -0.5
CCDC12-204ENST00000460035 TNFSF13BQ9Y275 285 aa11.91□□□□□ -0.5
CCDC12-204ENST00000460035 YBX2Q9Y2T7 364 aaKnown RBP11.91□□□□□ -0.5
CCDC12-204ENST00000460035 IPPQ9Y573 584 aa11.91□□□□□ -0.5
CCDC12-204ENST00000460035 LAMA3Q16787 3333 aa11.91□□□□□ -0.5
CCDC12-204ENST00000460035 COL4A4P53420 1690 aaPredicted RBP11.91□□□□□ -0.5
CCDC12-204ENST00000460035 HOXA2O43364 376 aa11.9□□□□□ -0.5
CCDC12-204ENST00000460035 KLRC4O43908 158 aa11.9□□□□□ -0.5
CCDC12-204ENST00000460035 PIGRP01833 764 aa11.9□□□□□ -0.5
CCDC12-204ENST00000460035 RPN1P04843 607 aaKnown RBP11.9□□□□□ -0.5
CCDC12-204ENST00000460035 HARSP12081 509 aaKnown RBP11.9□□□□□ -0.5
CCDC12-204ENST00000460035 ATF7P17544 494 aaPredicted RBP11.9□□□□□ -0.5
CCDC12-204ENST00000460035 DNAJB2P25686 324 aa11.9□□□□□ -0.5
CCDC12-204ENST00000460035 CASP5P51878 434 aa11.9□□□□□ -0.5
CCDC12-204ENST00000460035 PNOCQ13519 176 aa11.9□□□□□ -0.5
CCDC12-204ENST00000460035 ALCAMQ13740 583 aa11.9□□□□□ -0.5
CCDC12-204ENST00000460035 BTG3Q14201 252 aaPredicted RBP11.9□□□□□ -0.5
CCDC12-204ENST00000460035 KMT5BQ4FZB7 885 aa11.9□□□□□ -0.5
CCDC12-204ENST00000460035 FAM26FQ5R3K3 315 aa11.9□□□□□ -0.5
CCDC12-204ENST00000460035 ZPBP2Q6X784 338 aa11.9□□□□□ -0.5
CCDC12-204ENST00000460035 STXBP4Q6ZWJ1 553 aa11.9□□□□□ -0.5
CCDC12-204ENST00000460035 MRPL10Q7Z7H8 261 aaKnown RBP11.9□□□□□ -0.5
CCDC12-204ENST00000460035 ELOA2Q8IYF1 753 aaPredicted RBP11.9□□□□□ -0.5
CCDC12-204ENST00000460035 SMG8Q8ND04 991 aaKnown RBP11.9□□□□□ -0.5
CCDC12-204ENST00000460035 FGFBP2Q9BYJ0 223 aa11.9□□□□□ -0.5
CCDC12-204ENST00000460035 RNF39Q9H2S5 420 aa11.9□□□□□ -0.5
CCDC12-204ENST00000460035 SLC28A3Q9HAS3 691 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms