RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 HACE1Q8IYU2 909 aa8.84□□□□□ -0.99
HPS4-207ENST00000459918 CMASQ8NFW8 434 aaPredicted RBP8.84□□□□□ -0.99
HPS4-207ENST00000459918 PJA1Q8NG27 643 aa8.84□□□□□ -0.99
HPS4-207ENST00000459918 GJA10Q969M2 543 aa8.84□□□□□ -0.99
HPS4-207ENST00000459918 ESYT1Q9BSJ8 1104 aa8.84□□□□□ -0.99
HPS4-207ENST00000459918 HERC2P3Q9BVR0 1158 aa8.84□□□□□ -0.99
HPS4-207ENST00000459918 TRAIPQ9BWF2 469 aa8.84□□□□□ -0.99
HPS4-207ENST00000459918 APOL6Q9BWW8 343 aa8.84□□□□□ -0.99
HPS4-207ENST00000459918 LSG1Q9H089 658 aaKnown RBP8.84□□□□□ -0.99
HPS4-207ENST00000459918 ZMYND12Q9H0C1 365 aa8.84□□□□□ -0.99
HPS4-207ENST00000459918 UNC45AQ9H3U1 944 aa8.84□□□□□ -0.99
HPS4-207ENST00000459918 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.84□□□□□ -0.99
HPS4-207ENST00000459918 EPS15L1Q9UBC2 864 aa8.84□□□□□ -0.99
HPS4-207ENST00000459918 USP18Q9UMW8 372 aa8.84□□□□□ -0.99
HPS4-207ENST00000459918 PCDHB8Q9UN66 801 aa8.84□□□□□ -0.99
HPS4-207ENST00000459918 COL4A3BPQ9Y5P4 624 aa8.84□□□□□ -0.99
HPS4-207ENST00000459918 ARID2Q68CP9 1835 aa8.84□□□□□ -0.99
HPS4-207ENST00000459918 ESYT2A0FGR8 921 aa8.83□□□□□ -1
HPS4-207ENST00000459918 GAS2O43903 313 aaKnown RBP8.83□□□□□ -1
HPS4-207ENST00000459918 B4GALT3O60512 393 aa8.83□□□□□ -1
HPS4-207ENST00000459918 ZNF623O75123 536 aa8.83□□□□□ -1
HPS4-207ENST00000459918 LAMP2P13473 410 aa8.83□□□□□ -1
HPS4-207ENST00000459918 FSHRP23945 695 aa8.83□□□□□ -1
HPS4-207ENST00000459918 CDC27P30260 824 aa8.83□□□□□ -1
HPS4-207ENST00000459918 MLH1P40692 756 aa8.83□□□□□ -1
HPS4-207ENST00000459918 VASPP50552 380 aaPredicted RBP8.83□□□□□ -1
HPS4-207ENST00000459918 CREMQ03060 361 aa8.83□□□□□ -1
HPS4-207ENST00000459918 CSTF1Q05048 431 aaKnown RBP8.83□□□□□ -1
HPS4-207ENST00000459918 SNW1Q13573 536 aaKnown RBP8.83□□□□□ -1
HPS4-207ENST00000459918 VARS2Q5ST30 1063 aaKnown RBP8.83□□□□□ -1
HPS4-207ENST00000459918 PHLDB3Q6NSJ2 640 aa8.83□□□□□ -1
HPS4-207ENST00000459918 DHX32Q7L7V1 743 aaKnown RBP8.83□□□□□ -1
HPS4-207ENST00000459918 GPR161Q8N6U8 529 aaKnown RBP8.83□□□□□ -1
HPS4-207ENST00000459918 PSPC1Q8WXF1 523 aaKnown RBP8.83□□□□□ -1
HPS4-207ENST00000459918 CHAMP1Q96JM3 812 aa8.83□□□□□ -1
HPS4-207ENST00000459918 B3GALT6Q96L58 329 aa8.83□□□□□ -1
HPS4-207ENST00000459918 UBN1Q9NPG3 1134 aa8.83□□□□□ -1
HPS4-207ENST00000459918 ZDHHC7Q9NXF8 308 aa8.83□□□□□ -1
HPS4-207ENST00000459918 DOCK8Q8NF50 2099 aa8.83□□□□□ -1
HPS4-207ENST00000459918 NCOR2Q9Y618 2525 aa8.82□□□□□ -1
HPS4-207ENST00000459918 ARL5CA6NH57 179 aa8.82□□□□□ -1
HPS4-207ENST00000459918 SPTLC1O15269 473 aa8.82□□□□□ -1
HPS4-207ENST00000459918 MARCH6O60337 910 aa8.82□□□□□ -1
HPS4-207ENST00000459918 LRRN2O75325 713 aa8.82□□□□□ -1
HPS4-207ENST00000459918 MAFO75444 373 aaPredicted RBP8.82□□□□□ -1
HPS4-207ENST00000459918 CIITAP33076 1130 aa8.82□□□□□ -1
HPS4-207ENST00000459918 ADD1P35611 737 aaKnown RBP8.82□□□□□ -1
HPS4-207ENST00000459918 AFF1P51825 1210 aaKnown RBP8.82□□□□□ -1
HPS4-207ENST00000459918 NLRP5P59047 1200 aa8.82□□□□□ -1
HPS4-207ENST00000459918 PSMC5P62195 406 aa8.82□□□□□ -1
HPS4-207ENST00000459918 LMNB2Q03252 620 aa8.82□□□□□ -1
HPS4-207ENST00000459918 FUT2Q10981 343 aa8.82□□□□□ -1
HPS4-207ENST00000459918 HTR4Q13639 388 aa8.82□□□□□ -1
HPS4-207ENST00000459918 KRT32Q14532 448 aa8.82□□□□□ -1
HPS4-207ENST00000459918 NECTIN1Q15223 517 aa8.82□□□□□ -1
HPS4-207ENST00000459918 TARBP2Q15633 366 aaKnown RBP8.82□□□□□ -1
HPS4-207ENST00000459918 KIAA0319Q5VV43 1072 aa8.82□□□□□ -1
HPS4-207ENST00000459918 AGMOQ6ZNB7 445 aa8.82□□□□□ -1
HPS4-207ENST00000459918 MTSS1LQ765P7 747 aa8.82□□□□□ -1
HPS4-207ENST00000459918 TAS1R1Q7RTX1 841 aa8.82□□□□□ -1
HPS4-207ENST00000459918 EXOC8Q8IYI6 725 aa8.82□□□□□ -1
HPS4-207ENST00000459918 CNNM3Q8NE01 707 aa8.82□□□□□ -1
HPS4-207ENST00000459918 RDM1Q8NG50 284 aa8.82□□□□□ -1
HPS4-207ENST00000459918 CRYGNQ8WXF5 182 aa8.82□□□□□ -1
HPS4-207ENST00000459918 SLC5A5Q92911 643 aa8.82□□□□□ -1
HPS4-207ENST00000459918 TMEM143Q96AN5 459 aa8.82□□□□□ -1
HPS4-207ENST00000459918 LENG9Q96B70 501 aa8.82□□□□□ -1
HPS4-207ENST00000459918 CEP170P1Q96L14 293 aa8.82□□□□□ -1
HPS4-207ENST00000459918 CCDC43Q96MW1 224 aaKnown RBP8.82□□□□□ -1
HPS4-207ENST00000459918 COLEC11Q9BWP8 271 aa8.82□□□□□ -1
HPS4-207ENST00000459918 SLC26A6Q9BXS9 759 aa8.82□□□□□ -1
HPS4-207ENST00000459918 NIFKQ9BYG3 293 aaKnown RBP8.82□□□□□ -1
HPS4-207ENST00000459918 PLEKHA4Q9H4M7 779 aa8.82□□□□□ -1
HPS4-207ENST00000459918 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.82□□□□□ -1
HPS4-207ENST00000459918 MARCH5Q9NX47 278 aa8.82□□□□□ -1
HPS4-207ENST00000459918 DLL3Q9NYJ7 618 aa8.82□□□□□ -1
HPS4-207ENST00000459918 VPS54Q9P1Q0 977 aa8.82□□□□□ -1
HPS4-207ENST00000459918 GMEB2Q9UKD1 530 aa8.82□□□□□ -1
HPS4-207ENST00000459918 RAB23Q9ULC3 237 aa8.82□□□□□ -1
HPS4-207ENST00000459918 CACNA1BQ00975 2339 aa8.82□□□□□ -1
HPS4-207ENST00000459918 COL4A3Q01955 1670 aa8.81□□□□□ -1
HPS4-207ENST00000459918 KANSL1LA0AUZ9 987 aa8.81□□□□□ -1
HPS4-207ENST00000459918 INO80B-WBP1J3KQ70 363 aa8.81□□□□□ -1
HPS4-207ENST00000459918 ADAMTS3O15072 1205 aa8.81□□□□□ -1
HPS4-207ENST00000459918 TGM5O43548 720 aa8.81□□□□□ -1
HPS4-207ENST00000459918 DKC1O60832 514 aaKnown RBP eCLIP8.81□□□□□ -1
HPS4-207ENST00000459918 TADA2AO75478 443 aa8.81□□□□□ -1
HPS4-207ENST00000459918 HMGB1P09429 215 aaKnown RBP8.81□□□□□ -1
HPS4-207ENST00000459918 RPL17P18621 184 aaKnown RBP8.81□□□□□ -1
HPS4-207ENST00000459918 NCLP19338 710 aaKnown RBP8.81□□□□□ -1
HPS4-207ENST00000459918 SCNN1GP51170 649 aa8.81□□□□□ -1
HPS4-207ENST00000459918 USP11P51784 963 aa8.81□□□□□ -1
HPS4-207ENST00000459918 GPC5P78333 572 aa8.81□□□□□ -1
HPS4-207ENST00000459918 PFKPQ01813 784 aa8.81□□□□□ -1
HPS4-207ENST00000459918 MLF2Q15773 248 aaPredicted RBP8.81□□□□□ -1
HPS4-207ENST00000459918 TMEM132AQ24JP5 1023 aa8.81□□□□□ -1
HPS4-207ENST00000459918 USP41Q3LFD5 358 aa8.81□□□□□ -1
HPS4-207ENST00000459918 PPM1LQ5SGD2 360 aa8.81□□□□□ -1
HPS4-207ENST00000459918 NOTUMQ6P988 496 aa8.81□□□□□ -1
HPS4-207ENST00000459918 SRGAP1Q7Z6B7 1085 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms