RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 EXOC4Q96A65 974 aa17.01■□□□□ 0.31
HDAC7-217ENST00000459625 GTF2A1LQ9UNN4 478 aa17.01■□□□□ 0.31
HDAC7-217ENST00000459625 ARAP3Q8WWN8 1544 aa17.01■□□□□ 0.31
HDAC7-217ENST00000459625 KRT37O76014 449 aa17■□□□□ 0.31
HDAC7-217ENST00000459625 SF3B3Q15393 1217 aaKnown RBP17■□□□□ 0.31
HDAC7-217ENST00000459625 FOPNLQ96NB1 174 aa17■□□□□ 0.31
HDAC7-217ENST00000459625 NFU1Q9UMS0 254 aa17■□□□□ 0.31
HDAC7-217ENST00000459625 SLC16A1P53985 500 aa17■□□□□ 0.31
HDAC7-217ENST00000459625 EPHB4P54760 987 aa17■□□□□ 0.31
HDAC7-217ENST00000459625 ROR1Q01973 937 aa17■□□□□ 0.31
HDAC7-217ENST00000459625 HLFQ16534 295 aa17■□□□□ 0.31
HDAC7-217ENST00000459625 OSBP2Q969R2 916 aa17■□□□□ 0.31
HDAC7-217ENST00000459625 PGBD4Q96DM1 585 aa17■□□□□ 0.31
HDAC7-217ENST00000459625 DDX50Q9BQ39 737 aaKnown RBP17■□□□□ 0.31
HDAC7-217ENST00000459625 RAPGEF6Q8TEU7 1601 aa17■□□□□ 0.31
HDAC7-217ENST00000459625 ATXN3P54252 364 aaPredicted RBP17■□□□□ 0.31
HDAC7-217ENST00000459625 PABPC5Q96DU9 382 aaKnown RBP17■□□□□ 0.31
HDAC7-217ENST00000459625 NDST4Q9H3R1 872 aa17■□□□□ 0.31
HDAC7-217ENST00000459625 POTEB3A0JP26 581 aa17■□□□□ 0.31
HDAC7-217ENST00000459625 POTECB2RU33 542 aa17■□□□□ 0.31
HDAC7-217ENST00000459625 SH2B2O14492 632 aaPredicted RBP17■□□□□ 0.31
HDAC7-217ENST00000459625 LMNAP02545 664 aaKnown RBP17■□□□□ 0.31
HDAC7-217ENST00000459625 CYP21A2P08686 494 aa17■□□□□ 0.31
HDAC7-217ENST00000459625 POTEBQ6S5H4 581 aa17■□□□□ 0.31
HDAC7-217ENST00000459625 APOL5Q9BWW9 433 aa17■□□□□ 0.31
HDAC7-217ENST00000459625 IQCA1LA6NCM1 817 aa17■□□□□ 0.31
HDAC7-217ENST00000459625 TRIM49BA6NDI0 452 aa17■□□□□ 0.31
HDAC7-217ENST00000459625 RASA4BC9J798 803 aa17■□□□□ 0.31
HDAC7-217ENST00000459625 RASA4O43374 803 aa17■□□□□ 0.31
HDAC7-217ENST00000459625 PPP6R2O75170 966 aa17■□□□□ 0.31
HDAC7-217ENST00000459625 PALMO75781 387 aa17■□□□□ 0.31
HDAC7-217ENST00000459625 MZF1P28698 734 aaPredicted RBP17■□□□□ 0.31
HDAC7-217ENST00000459625 PRDX5P30044 214 aa17■□□□□ 0.31
HDAC7-217ENST00000459625 GPS1Q13098 491 aa17■□□□□ 0.31
HDAC7-217ENST00000459625 PDAP1Q13442 181 aaKnown RBP17■□□□□ 0.31
HDAC7-217ENST00000459625 DMAP1Q9NPF5 467 aaPredicted RBP17■□□□□ 0.31
HDAC7-217ENST00000459625 ENTPD7Q9NQZ7 604 aa17■□□□□ 0.31
HDAC7-217ENST00000459625 AURKCQ9UQB9 309 aa17■□□□□ 0.31
HDAC7-217ENST00000459625 PBLDP30039 288 aaPredicted RBP16.99■□□□□ 0.31
HDAC7-217ENST00000459625 WDR75Q8IWA0 830 aaKnown RBP16.99■□□□□ 0.31
HDAC7-217ENST00000459625 OR9Q1Q8NGQ5 310 aa16.99■□□□□ 0.31
HDAC7-217ENST00000459625 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.99■□□□□ 0.318e-7■■■■■ 32.7
HDAC7-217ENST00000459625 TM6SF1Q9BZW5 370 aa16.99■□□□□ 0.31
HDAC7-217ENST00000459625 POTEFA5A3E0 1075 aa16.99■□□□□ 0.31
HDAC7-217ENST00000459625 POTEIP0CG38 1075 aa16.99■□□□□ 0.31
HDAC7-217ENST00000459625 TPI1P60174 286 aa16.99■□□□□ 0.31
HDAC7-217ENST00000459625 NAALADL2Q58DX5 795 aa16.99■□□□□ 0.31
HDAC7-217ENST00000459625 POTEGQ6S5H5 508 aa16.99■□□□□ 0.31
HDAC7-217ENST00000459625 POTEEQ6S8J3 1075 aa16.99■□□□□ 0.31
HDAC7-217ENST00000459625 MTBPQ96DY7 904 aa16.99■□□□□ 0.31
HDAC7-217ENST00000459625 L3MBTL3Q96JM7 780 aaPredicted RBP16.99■□□□□ 0.31
HDAC7-217ENST00000459625 KIFC3Q9BVG8 833 aa16.99■□□□□ 0.31
HDAC7-217ENST00000459625 ZFYVE28Q9HCC9 887 aa16.99■□□□□ 0.31
HDAC7-217ENST00000459625 POLRMTO00411 1230 aaKnown RBP16.99■□□□□ 0.31
HDAC7-217ENST00000459625 CIAO1O76071 339 aa16.99■□□□□ 0.31
HDAC7-217ENST00000459625 PYGBP11216 843 aa16.99■□□□□ 0.31
HDAC7-217ENST00000459625 NEK9Q8TD19 979 aa16.99■□□□□ 0.31
HDAC7-217ENST00000459625 SLC39A14Q15043 492 aa16.99■□□□□ 0.31
HDAC7-217ENST00000459625 STX19Q8N4C7 294 aa16.99■□□□□ 0.31
HDAC7-217ENST00000459625 SLC25A13Q9UJS0 675 aa16.99■□□□□ 0.31
HDAC7-217ENST00000459625 PKP3Q9Y446 797 aa16.99■□□□□ 0.31
HDAC7-217ENST00000459625 ALKBH5Q6P6C2 394 aaKnown RBP16.99■□□□□ 0.31
HDAC7-217ENST00000459625 SSH3Q8TE77 659 aa16.99■□□□□ 0.31
HDAC7-217ENST00000459625 ACAD9Q9H845 621 aa16.99■□□□□ 0.31
HDAC7-217ENST00000459625 LATS2Q9NRM7 1088 aa16.99■□□□□ 0.31
HDAC7-217ENST00000459625 RWDD2AQ9UIY3 292 aa16.99■□□□□ 0.31
HDAC7-217ENST00000459625 CELF2O95319 508 aaKnown RBP16.98■□□□□ 0.31
HDAC7-217ENST00000459625 HIST1H2AGP0C0S8 130 aaPredicted RBP16.98■□□□□ 0.31
HDAC7-217ENST00000459625 HIST1H2ADP20671 130 aa16.98■□□□□ 0.31
HDAC7-217ENST00000459625 MICALL2Q8IY33 904 aa16.98■□□□□ 0.31
HDAC7-217ENST00000459625 TTLL11Q8NHH1 800 aa16.98■□□□□ 0.31
HDAC7-217ENST00000459625 HIST1H2AHQ96KK5 128 aa16.98■□□□□ 0.31
HDAC7-217ENST00000459625 HIST1H2AJQ99878 128 aa16.98■□□□□ 0.31
HDAC7-217ENST00000459625 H2AFJQ9BTM1 129 aa16.98■□□□□ 0.31
HDAC7-217ENST00000459625 PITPNM3Q9BZ71 974 aa16.98■□□□□ 0.31
HDAC7-217ENST00000459625 RBAKQ9NYW8 714 aaPredicted RBP16.98■□□□□ 0.31
HDAC7-217ENST00000459625 MAPK13O15264 365 aa16.98■□□□□ 0.31
HDAC7-217ENST00000459625 CDK17Q00537 523 aa16.98■□□□□ 0.31
HDAC7-217ENST00000459625 KCNV2Q8TDN2 545 aa16.98■□□□□ 0.31
HDAC7-217ENST00000459625 GEMIN8Q9NWZ8 242 aaKnown RBP16.98■□□□□ 0.31
HDAC7-217ENST00000459625 DTNAQ9Y4J8 743 aa16.98■□□□□ 0.31
HDAC7-217ENST00000459625 ATN1P54259 1190 aaPredicted RBP16.98■□□□□ 0.31
HDAC7-217ENST00000459625 SESN2P58004 480 aaPredicted RBP16.98■□□□□ 0.31
HDAC7-217ENST00000459625 MDM2Q00987 491 aaPredicted RBP16.98■□□□□ 0.31
HDAC7-217ENST00000459625 GFPT1Q06210 699 aaPredicted RBP16.98■□□□□ 0.31
HDAC7-217ENST00000459625 C1orf146Q5VVC0 180 aa16.98■□□□□ 0.31
HDAC7-217ENST00000459625 ZBTB5O15062 677 aa16.98■□□□□ 0.31
HDAC7-217ENST00000459625 GYG2O15488 501 aa16.98■□□□□ 0.31
HDAC7-217ENST00000459625 WEE1P30291 646 aa16.98■□□□□ 0.31
HDAC7-217ENST00000459625 ANKMY2Q8IV38 441 aa16.98■□□□□ 0.31
HDAC7-217ENST00000459625 MCPH1Q8NEM0 835 aa16.98■□□□□ 0.31
HDAC7-217ENST00000459625 RRAGDQ9NQL2 400 aaPredicted RBP16.98■□□□□ 0.31
HDAC7-217ENST00000459625 DCTN3O75935 186 aa16.98■□□□□ 0.31
HDAC7-217ENST00000459625 MAPK9P45984 424 aa16.98■□□□□ 0.31
HDAC7-217ENST00000459625 VAMP7P51809 220 aa16.98■□□□□ 0.31
HDAC7-217ENST00000459625 CDH6P55285 790 aa16.98■□□□□ 0.31
HDAC7-217ENST00000459625 TBC1D1Q86TI0 1168 aaPredicted RBP16.98■□□□□ 0.31
HDAC7-217ENST00000459625 CLMNQ96JQ2 1002 aa16.98■□□□□ 0.31
HDAC7-217ENST00000459625 FAM161BQ96MY7 647 aa16.98■□□□□ 0.31
HDAC7-217ENST00000459625 CDC23Q9UJX2 597 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms