RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 RFX1P22670 979 aa9.15□□□□□ -0.94
VPS50-208ENST00000458707 ATP2B4P23634 1241 aa9.15□□□□□ -0.94
VPS50-208ENST00000458707 ABCD1P33897 745 aa9.15□□□□□ -0.94
VPS50-208ENST00000458707 RPL21P46778 160 aaKnown RBP9.15□□□□□ -0.94
VPS50-208ENST00000458707 PLTPP55058 493 aa9.15□□□□□ -0.94
VPS50-208ENST00000458707 EIF6P56537 245 aaKnown RBP9.15□□□□□ -0.94
VPS50-208ENST00000458707 SLC8A3P57103 927 aa9.15□□□□□ -0.94
VPS50-208ENST00000458707 IFI35P80217 286 aaPredicted RBP9.15□□□□□ -0.94
VPS50-208ENST00000458707 GPSM2P81274 684 aa9.15□□□□□ -0.94
VPS50-208ENST00000458707 ARHGAP4P98171 946 aa9.15□□□□□ -0.94
VPS50-208ENST00000458707 SLMAPQ14BN4 828 aa9.15□□□□□ -0.94
VPS50-208ENST00000458707 PPP1R7Q15435 360 aa9.15□□□□□ -0.94
VPS50-208ENST00000458707 CYP1B1Q16678 543 aa9.15□□□□□ -0.94
VPS50-208ENST00000458707 KCTD19Q17RG1 926 aaPredicted RBP9.15□□□□□ -0.94
VPS50-208ENST00000458707 QRICH1Q2TAL8 776 aa9.15□□□□□ -0.94
VPS50-208ENST00000458707 MFSD14BQ5SR56 506 aa9.15□□□□□ -0.94
VPS50-208ENST00000458707 AP1ARQ63HQ0 302 aa9.15□□□□□ -0.94
VPS50-208ENST00000458707 SMIM5Q71RC9 77 aa9.15□□□□□ -0.94
VPS50-208ENST00000458707 FAM186BQ8IYM0 893 aa9.15□□□□□ -0.94
VPS50-208ENST00000458707 MAB21L3Q8N8X9 362 aa9.15□□□□□ -0.94
VPS50-208ENST00000458707 HOOK2Q96ED9 719 aa9.15□□□□□ -0.94
VPS50-208ENST00000458707 FAM20AQ96MK3 541 aa9.15□□□□□ -0.94
VPS50-208ENST00000458707 GPR101Q96P66 508 aaPredicted RBP9.15□□□□□ -0.94
VPS50-208ENST00000458707 SELENOSQ9BQE4 189 aa9.15□□□□□ -0.94
VPS50-208ENST00000458707 ROPN1BQ9BZX4 212 aaPredicted RBP9.15□□□□□ -0.94
VPS50-208ENST00000458707 ROPN1Q9HAT0 212 aaPredicted RBP9.15□□□□□ -0.94
VPS50-208ENST00000458707 GOPCQ9HD26 462 aa9.15□□□□□ -0.94
VPS50-208ENST00000458707 SAMD15Q9P1V8 674 aa9.15□□□□□ -0.94
VPS50-208ENST00000458707 MTRF1LQ9UGC7 380 aaKnown RBP9.15□□□□□ -0.94
VPS50-208ENST00000458707 COG5Q9UP83 839 aa9.15□□□□□ -0.94
VPS50-208ENST00000458707 SNX24Q9Y343 169 aa9.15□□□□□ -0.94
VPS50-208ENST00000458707 RTCBQ9Y3I0 505 aaKnown RBP9.15□□□□□ -0.94
VPS50-208ENST00000458707 DAGLAQ9Y4D2 1042 aa9.15□□□□□ -0.94
VPS50-208ENST00000458707 CLIC2O15247 247 aa9.15□□□□□ -0.95
VPS50-208ENST00000458707 RIPK2O43353 540 aa9.15□□□□□ -0.95
VPS50-208ENST00000458707 PPP1R12BO60237 982 aaPredicted RBP9.15□□□□□ -0.95
VPS50-208ENST00000458707 GCNT3O95395 438 aa9.15□□□□□ -0.95
VPS50-208ENST00000458707 CIITAP33076 1130 aa9.15□□□□□ -0.95
VPS50-208ENST00000458707 SHMT1P34896 483 aa9.15□□□□□ -0.95
VPS50-208ENST00000458707 SLC16A2P36021 539 aa9.15□□□□□ -0.95
VPS50-208ENST00000458707 PDE6CP51160 858 aa9.15□□□□□ -0.95
VPS50-208ENST00000458707 KCNA1Q09470 495 aa9.15□□□□□ -0.95
VPS50-208ENST00000458707 PRPF4BQ13523 1007 aaKnown RBP9.15□□□□□ -0.95
VPS50-208ENST00000458707 AUHQ13825 339 aaKnown RBP9.15□□□□□ -0.95
VPS50-208ENST00000458707 E2F5Q15329 346 aa9.15□□□□□ -0.95
VPS50-208ENST00000458707 CNGA2Q16280 664 aa9.15□□□□□ -0.95
VPS50-208ENST00000458707 SLC5A9Q2M3M2 681 aa9.15□□□□□ -0.95
VPS50-208ENST00000458707 GALNTL6Q49A17 601 aa9.15□□□□□ -0.95
VPS50-208ENST00000458707 TAOK1Q7L7X3 1001 aa9.15□□□□□ -0.95
VPS50-208ENST00000458707 PRELID2Q8N945 189 aa9.15□□□□□ -0.95
VPS50-208ENST00000458707 TMC2Q8TDI7 906 aa9.15□□□□□ -0.95
VPS50-208ENST00000458707 ART4Q93070 314 aa9.15□□□□□ -0.95
VPS50-208ENST00000458707 C18orf8Q96DM3 657 aa9.15□□□□□ -0.95
VPS50-208ENST00000458707 RUNDC3BQ96NL0 473 aa9.15□□□□□ -0.95
VPS50-208ENST00000458707 RPS6KC1Q96S38 1066 aa9.15□□□□□ -0.95
VPS50-208ENST00000458707 PRMT1Q99873 361 aaKnown RBP9.15□□□□□ -0.95
VPS50-208ENST00000458707 RUSC1Q9BVN2 902 aa9.15□□□□□ -0.95
VPS50-208ENST00000458707 THAP2Q9H0W7 228 aa9.15□□□□□ -0.95
VPS50-208ENST00000458707 SEMA4AQ9H3S1 761 aa9.15□□□□□ -0.95
VPS50-208ENST00000458707 DMAC2Q9NW81 257 aa9.15□□□□□ -0.95
VPS50-208ENST00000458707 APEX2Q9UBZ4 518 aa9.15□□□□□ -0.95
VPS50-208ENST00000458707 SERPINB13Q9UIV8 391 aa9.15□□□□□ -0.95
VPS50-208ENST00000458707 VAV3Q9UKW4 847 aa9.15□□□□□ -0.95
VPS50-208ENST00000458707 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.15□□□□□ -0.95
VPS50-208ENST00000458707 ALG6Q9Y672 507 aa9.15□□□□□ -0.95
VPS50-208ENST00000458707 UBR3Q6ZT12 1888 aa9.14□□□□□ -0.95
VPS50-208ENST00000458707 A0A1B0GUA9 196 aa9.14□□□□□ -0.95
VPS50-208ENST00000458707 MEIS1O00470 390 aa9.14□□□□□ -0.95
VPS50-208ENST00000458707 SNX3O60493 162 aa9.14□□□□□ -0.95
VPS50-208ENST00000458707 TBCAO75347 108 aaKnown RBP9.14□□□□□ -0.95
VPS50-208ENST00000458707 MTA2O94776 668 aa9.14□□□□□ -0.95
VPS50-208ENST00000458707 ABCB4P21439 1286 aa9.14□□□□□ -0.95
VPS50-208ENST00000458707 TNFAIP3P21580 790 aa9.14□□□□□ -0.95
VPS50-208ENST00000458707 COPB2P35606 906 aa9.14□□□□□ -0.95
VPS50-208ENST00000458707 SREBF1P36956 1147 aa9.14□□□□□ -0.95
VPS50-208ENST00000458707 PEX5P50542 639 aa9.14□□□□□ -0.95
VPS50-208ENST00000458707 ZNF131P52739 623 aa9.14□□□□□ -0.95
VPS50-208ENST00000458707 KCNQ4P56696 695 aa9.14□□□□□ -0.95
VPS50-208ENST00000458707 ZNF211Q13398 564 aaPredicted RBP9.14□□□□□ -0.95
VPS50-208ENST00000458707 CTTNQ14247 550 aaKnown RBP9.14□□□□□ -0.95
VPS50-208ENST00000458707 PRR16Q569H4 304 aa9.14□□□□□ -0.95
VPS50-208ENST00000458707 RINT1Q6NUQ1 792 aa9.14□□□□□ -0.95
VPS50-208ENST00000458707 KCTD1Q719H9 257 aa9.14□□□□□ -0.95
VPS50-208ENST00000458707 CYFIP1Q7L576 1253 aa9.14□□□□□ -0.95
VPS50-208ENST00000458707 ZDHHC14Q8IZN3 488 aa9.14□□□□□ -0.95
VPS50-208ENST00000458707 UBL4BQ8N7F7 174 aa9.14□□□□□ -0.95
VPS50-208ENST00000458707 C12orf50Q8NA57 414 aaPredicted RBP9.14□□□□□ -0.95
VPS50-208ENST00000458707 MORC4Q8TE76 937 aa9.14□□□□□ -0.95
VPS50-208ENST00000458707 UIMC1Q96RL1 719 aa9.14□□□□□ -0.95
VPS50-208ENST00000458707 P2RX7Q99572 595 aaKnown RBP9.14□□□□□ -0.95
VPS50-208ENST00000458707 ELAC2Q9BQ52 826 aaKnown RBP9.14□□□□□ -0.95
VPS50-208ENST00000458707 ZSWIM1Q9BR11 485 aa9.14□□□□□ -0.95
VPS50-208ENST00000458707 MTFR1LQ9H019 292 aa9.14□□□□□ -0.95
VPS50-208ENST00000458707 BHMT2Q9H2M3 363 aa9.14□□□□□ -0.95
VPS50-208ENST00000458707 TAS2R14Q9NYV8 317 aa9.14□□□□□ -0.95
VPS50-208ENST00000458707 RABGAP1Q9Y3P9 1069 aa9.14□□□□□ -0.95
VPS50-208ENST00000458707 PCDHA1Q9Y5I3 950 aa9.14□□□□□ -0.95
VPS50-208ENST00000458707 ZNF646O15015 1829 aaPredicted RBP9.14□□□□□ -0.95
VPS50-208ENST00000458707 TLDC2A0PJX2 215 aa9.13□□□□□ -0.95
VPS50-208ENST00000458707 ARHGAP33O14559 1287 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms